RNA–Protein interactions for RNA: snR43

snR43, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeastyeast

Gene snR43, Length 209 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR43snR43 SMC1P32908 1225 aa3.07□□□□□ -1.92
snR43snR43 IRS4P36115 615 aaKnown RBP3.07□□□□□ -1.92
snR43snR43 DBP7P36120 742 aaKnown RBP3.07□□□□□ -1.92
snR43snR43 KTR3P38130 404 aaPredicted RBP3.07□□□□□ -1.92
snR43snR43 PHO88P38264 188 aaPredicted RBP3.07□□□□□ -1.92
snR43snR43 PES4P39684 611 aa3.07□□□□□ -1.92
snR43snR43 NTA1P40354 457 aa3.07□□□□□ -1.92
snR43snR43 LSB3P43603 459 aaKnown RBP3.07□□□□□ -1.92
snR43snR43 SCS3P53012 380 aa3.07□□□□□ -1.92
snR43snR43 MCM6P53091 1017 aaKnown RBP3.07□□□□□ -1.92
snR43snR43 DAK1P54838 584 aaKnown RBP3.07□□□□□ -1.92
snR43snR43 SPH1Q06160 661 aa3.07□□□□□ -1.92
snR43snR43 ISA1Q07821 250 aaPredicted RBP3.07□□□□□ -1.92
snR43snR43 MSC6Q08818 692 aaKnown RBP3.07□□□□□ -1.92
snR43snR43 RTP1Q12751 981 aa3.07□□□□□ -1.92
snR43snR43 PHR1P05066 565 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
snR43snR43 PDC5P16467 563 aaKnown RBP3.06□□□□□ -1.92
snR43snR43 POT1P27796 417 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
snR43snR43 CHS3P29465 1165 aa3.06□□□□□ -1.92
snR43snR43 MCM4P30665 933 aaKnown RBP3.06□□□□□ -1.92
snR43snR43 PYC2P32327 1180 aaKnown RBP3.06□□□□□ -1.92
snR43snR43 SEC8P32855 1065 aa3.06□□□□□ -1.92
snR43snR43 GPT2P36148 743 aa3.06□□□□□ -1.92
snR43snR43 RTS1P38903 757 aa3.06□□□□□ -1.92
snR43snR43 STM1P39015 273 aaKnown RBP3.06□□□□□ -1.92
snR43snR43 IRC8P47046 822 aa3.06□□□□□ -1.92
snR43snR43 VPS53P47061 822 aa3.06□□□□□ -1.92
snR43snR43 YGL242CP53066 181 aa3.06□□□□□ -1.92
snR43snR43 YNL011CP53980 444 aa3.06□□□□□ -1.92
snR43snR43 UFD2P54860 961 aa3.06□□□□□ -1.92
snR43snR43 MAP1Q01662 387 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
snR43snR43 TMA64Q04600 565 aaKnown RBP3.06□□□□□ -1.92
snR43snR43 YMR321CQ04898 105 aa3.06□□□□□ -1.92
snR43snR43 THI72Q08579 599 aa3.06□□□□□ -1.92
snR43snR43 ERP3Q12403 225 aa3.06□□□□□ -1.92
snR43snR43 TRM11Q12463 433 aa3.06□□□□□ -1.92
snR43snR43 SNA3P14359 133 aa3.05□□□□□ -1.92
snR43snR43 POL3P15436 1097 aa3.05□□□□□ -1.92
snR43snR43 SAM2P19358 384 aaKnown RBP3.05□□□□□ -1.92
snR43snR43 TKL1P23254 680 aaKnown RBP3.05□□□□□ -1.92
snR43snR43 MET4P32389 672 aa3.05□□□□□ -1.92
snR43snR43 TFC4P33339 1025 aa3.05□□□□□ -1.92
snR43snR43 DUR3P33413 735 aa3.05□□□□□ -1.92
snR43snR43 MCR1P36060 302 aaKnown RBP3.05□□□□□ -1.92
snR43snR43 PGM2P37012 569 aaKnown RBP3.05□□□□□ -1.92
snR43snR43 YHL008CP38750 627 aa3.05□□□□□ -1.92
snR43snR43 VPS27P40343 622 aaKnown RBP3.05□□□□□ -1.92
snR43snR43 YFL066CP43538 392 aa3.05□□□□□ -1.92
snR43snR43 MON1P53129 644 aa3.05□□□□□ -1.92
snR43snR43 YGL039WP53183 348 aaKnown RBP3.05□□□□□ -1.92
snR43snR43 ALO1P54783 526 aaKnown RBP3.05□□□□□ -1.92
snR43snR43 CTR9P89105 1077 aa3.05□□□□□ -1.92
snR43snR43 SLD5Q03406 294 aa3.05□□□□□ -1.92
snR43snR43 RMD1Q03441 430 aa3.05□□□□□ -1.92
snR43snR43 GUD1Q07729 489 aa3.05□□□□□ -1.92
snR43snR43 NCB2Q92317 146 aa3.05□□□□□ -1.92
snR43snR43 RAD61Q99359 647 aa3.05□□□□□ -1.92
snR43snR43 AI1P03875 834 aa3.04□□□□□ -1.92
snR43snR43 SAM1P10659 382 aaKnown RBP3.04□□□□□ -1.92
snR43snR43 ATE1P16639 503 aa3.04□□□□□ -1.92
snR43snR43 NAR1P23503 491 aaKnown RBP3.04□□□□□ -1.92
snR43snR43 UGA4P32837 571 aa3.04□□□□□ -1.92
snR43snR43 SHP1P34223 423 aa3.04□□□□□ -1.92
snR43snR43 SLD2P34252 453 aa3.04□□□□□ -1.92
snR43snR43 TFA2P36145 328 aa3.04□□□□□ -1.92
snR43snR43 ALG14P38242 237 aa3.04□□□□□ -1.92
snR43snR43 STB5P38699 743 aa3.04□□□□□ -1.92
snR43snR43 YNG2P38806 282 aaKnown RBP3.04□□□□□ -1.92
snR43snR43 VID27P40157 782 aa3.04□□□□□ -1.92
snR43snR43 YIL092WP40497 633 aa3.04□□□□□ -1.92
snR43snR43 TED1P40533 473 aa3.04□□□□□ -1.92
snR43snR43 POL32P47110 350 aa3.04□□□□□ -1.92
snR43snR43 YRB30P53107 440 aaPredicted RBP3.04□□□□□ -1.92
snR43snR43 SOK2P53438 785 aaPredicted RBP3.04□□□□□ -1.92
snR43snR43 SPO1P53541 631 aa3.04□□□□□ -1.92
snR43snR43 YNL034WP53963 612 aa3.04□□□□□ -1.92
snR43snR43 YNL018CP53976 612 aa3.04□□□□□ -1.92
snR43snR43 HEH2Q03281 663 aa3.04□□□□□ -1.92
snR43snR43 NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.04□□□□□ -1.92not detected
snR43snR43 BSC2Q05611 235 aa3.04□□□□□ -1.92
snR43snR43 DUS3Q06053 668 aaKnown RBP3.04□□□□□ -1.92
snR43snR43 NOT3P06102 836 aaKnown RBP3.03□□□□□ -1.92
snR43snR43 SWI6P09959 803 aa3.03□□□□□ -1.92
snR43snR43 COQ1P18900 473 aa3.03□□□□□ -1.92
snR43snR43 CAD1P24813 409 aaKnown RBP3.03□□□□□ -1.92
snR43snR43 MCM2P29469 868 aa3.03□□□□□ -1.92
snR43snR43 RPT1P33299 467 aaKnown RBP3.03□□□□□ -1.92
snR43snR43 FLR1P38124 548 aa3.03□□□□□ -1.92
snR43snR43 REG2P38232 338 aa3.03□□□□□ -1.92
snR43snR43 ECM2P38241 364 aaKnown RBP3.03□□□□□ -1.92
snR43snR43 OSH3P38713 996 aaKnown RBP3.03□□□□□ -1.92
snR43snR43 ALD5P40047 520 aaKnown RBP3.03□□□□□ -1.92
snR43snR43 YMR147WP40218 223 aaKnown RBP3.03□□□□□ -1.92
snR43snR43 INP51P40559 946 aaKnown RBP3.03□□□□□ -1.92
snR43snR43 OYE3P41816 400 aaPredicted RBP3.03□□□□□ -1.92
snR43snR43 DAK2P43550 591 aa3.03□□□□□ -1.92
snR43snR43 AZR1P50080 613 aa3.03□□□□□ -1.92
snR43snR43 VID30P53076 958 aa3.03□□□□□ -1.92
snR43snR43 MLC1P53141 149 aa3.03□□□□□ -1.92
snR43snR43 CDC55Q00362 526 aa3.03□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms