RNA–Protein interactions for RNA: YPL211W

NIP7, Transcript of Nucleolar protein required for 60S ribosome subunit biogenesis, yeast

Gene NIP7, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIP7	YPL211W	CMP2	P14747	604 aa		4.91	□□□□□ -1.62
NIP7	YPL211W	APL1	P27351	700 aa		4.91	□□□□□ -1.62
NIP7	YPL211W	SLA2	P33338	968 aa		4.91	□□□□□ -1.62
NIP7	YPL211W	YKL069W	P36088	180 aa		4.91	□□□□□ -1.62
NIP7	YPL211W	RSM24	Q03976	319 aa		4.91	□□□□□ -1.62
NIP7	YPL211W	YPL277C	Q08989	487 aa		4.91	□□□□□ -1.62
NIP7	YPL211W	RIB2	Q12362	591 aa	Known RBP	4.91	□□□□□ -1.62
NIP7	YPL211W	YBT1	P32386	1661 aa		4.91	□□□□□ -1.62
NIP7	YPL211W	DRS2	P39524	1355 aa		4.91	□□□□□ -1.62
NIP7	YPL211W	NAP1	P25293	417 aa	Known RBP	4.9	□□□□□ -1.63
NIP7	YPL211W	THI80	P35202	319 aa		4.9	□□□□□ -1.63
NIP7	YPL211W	PAM1	P37304	830 aa	Known RBP	4.9	□□□□□ -1.63
NIP7	YPL211W	MBP1	P39678	833 aa		4.9	□□□□□ -1.63
NIP7	YPL211W	PLB2	Q03674	706 aa		4.9	□□□□□ -1.63
NIP7	YPL211W	SGD1	Q06132	899 aa		4.9	□□□□□ -1.63
NIP7	YPL211W	OPI10	Q08202	246 aa		4.9	□□□□□ -1.63
NIP7	YPL211W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.9	□□□□□ -1.63	not detected
NIP7	YPL211W	TY3B-G	Q99315	1547 aa		4.9	□□□□□ -1.63
NIP7	YPL211W	PDR10	P51533	1564 aa		4.9	□□□□□ -1.63
NIP7	YPL211W	GAL10	P04397	699 aa		4.89	□□□□□ -1.63
NIP7	YPL211W	PRP6	P19735	899 aa	Predicted RBP	4.89	□□□□□ -1.63
NIP7	YPL211W	SRM1	P21827	482 aa		4.89	□□□□□ -1.63
NIP7	YPL211W	TOD6	P34219	525 aa		4.89	□□□□□ -1.63
NIP7	YPL211W	LAM1	P38851	1228 aa		4.89	□□□□□ -1.63
NIP7	YPL211W	GEM1	P39722	662 aa		4.89	□□□□□ -1.63
NIP7	YPL211W	ENV11	P53246	860 aa		4.89	□□□□□ -1.63
NIP7	YPL211W	NUP157	P40064	1391 aa	Known RBP	4.89	□□□□□ -1.63
NIP7	YPL211W	KIN2	P13186	1147 aa	Known RBP	4.88	□□□□□ -1.63
NIP7	YPL211W	ACE2	P21192	770 aa		4.88	□□□□□ -1.63
NIP7	YPL211W	RIM8	P53179	542 aa		4.88	□□□□□ -1.63
NIP7	YPL211W	CAT8	P39113	1433 aa		4.88	□□□□□ -1.63
NIP7	YPL211W	IQG1	Q12280	1495 aa		4.88	□□□□□ -1.63
NIP7	YPL211W	BUD3	P25558	1636 aa		4.87	□□□□□ -1.63
NIP7	YPL211W	DOP1	Q03921	1698 aa		4.87	□□□□□ -1.63
NIP7	YPL211W	SOD2	P00447	233 aa		4.87	□□□□□ -1.63
NIP7	YPL211W	AGP1	P25376	633 aa		4.87	□□□□□ -1.63
NIP7	YPL211W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
NIP7	YPL211W	MEF2	P39677	819 aa		4.87	□□□□□ -1.63
NIP7	YPL211W	SPT20	P50875	604 aa		4.87	□□□□□ -1.63
NIP7	YPL211W	HFM1	P51979	1187 aa		4.87	□□□□□ -1.63
NIP7	YPL211W	ATG13	Q06628	738 aa		4.87	□□□□□ -1.63
NIP7	YPL211W	YKL151C	P36059	337 aa		4.86	□□□□□ -1.63
NIP7	YPL211W	VBA5	P36172	582 aa		4.86	□□□□□ -1.63
NIP7	YPL211W	GTF1	P53260	183 aa	Predicted RBP	4.86	□□□□□ -1.63
NIP7	YPL211W	GCN5	Q03330	439 aa		4.86	□□□□□ -1.63
NIP7	YPL211W	HRQ1	Q05549	1077 aa		4.86	□□□□□ -1.63
NIP7	YPL211W	XYL2	Q07993	356 aa		4.86	□□□□□ -1.63
NIP7	YPL211W	MMS1	Q06211	1407 aa		4.86	□□□□□ -1.63
NIP7	YPL211W	SBA1	P28707	216 aa	Known RBP	4.85	□□□□□ -1.63
NIP7	YPL211W	MTC3	P53077	123 aa		4.85	□□□□□ -1.63
NIP7	YPL211W	YDR132C	Q03900	495 aa		4.85	□□□□□ -1.63
NIP7	YPL211W	ESC8	Q08119	714 aa		4.85	□□□□□ -1.63
NIP7	YPL211W	TRM3	Q07527	1436 aa		4.85	□□□□□ -1.63
NIP7	YPL211W	ARO1	P08566	1588 aa	Known RBP	4.85	□□□□□ -1.63
NIP7	YPL211W	THS1	P04801	734 aa	Known RBP	4.84	□□□□□ -1.63
NIP7	YPL211W	FLR1	P38124	548 aa		4.84	□□□□□ -1.63
NIP7	YPL211W	SNF7	P39929	240 aa	Known RBP	4.84	□□□□□ -1.63
NIP7	YPL211W	SAH1	P39954	449 aa	Known RBP	4.84	□□□□□ -1.63
NIP7	YPL211W	RRT14	P40470	206 aa		4.84	□□□□□ -1.63
NIP7	YPL211W	TAF1	P46677	1066 aa		4.84	□□□□□ -1.63
NIP7	YPL211W	GCV2	P49095	1034 aa		4.84	□□□□□ -1.63
NIP7	YPL211W	MSC2	Q03455	724 aa		4.84	□□□□□ -1.63
NIP7	YPL211W	CHC1	P22137	1653 aa	Known RBP	4.83	□□□□□ -1.64
NIP7	YPL211W	DNF2	Q12675	1612 aa		4.83	□□□□□ -1.64
NIP7	YPL211W	KRI1	P42846	591 aa	Known RBP	4.83	□□□□□ -1.64
NIP7	YPL211W	DUS4	Q06063	367 aa		4.83	□□□□□ -1.64
NIP7	YPL211W	TDA5	Q06417	326 aa	Known RBP	4.83	□□□□□ -1.64
NIP7	YPL211W	MDM38	Q08179	573 aa		4.83	□□□□□ -1.64
NIP7	YPL211W	YKL222C	P35995	705 aa		4.82	□□□□□ -1.64
NIP7	YPL211W	SIZ1	Q04195	904 aa		4.82	□□□□□ -1.64
NIP7	YPL211W	DUS3	Q06053	668 aa	Known RBP	4.82	□□□□□ -1.64
NIP7	YPL211W	OSW2	Q12202	724 aa		4.82	□□□□□ -1.64
NIP7	YPL211W	ENA1	P13587	1091 aa		4.81	□□□□□ -1.64
NIP7	YPL211W	SPF1	P39986	1215 aa	Known RBP	4.81	□□□□□ -1.64
NIP7	YPL211W	ENA2	Q01896	1091 aa		4.81	□□□□□ -1.64
NIP7	YPL211W	SHE9	Q04172	456 aa		4.81	□□□□□ -1.64
NIP7	YPL211W	YDR306C	Q06640	478 aa		4.81	□□□□□ -1.64
NIP7	YPL211W	GPB1	Q08886	897 aa		4.81	□□□□□ -1.64
NIP7	YPL211W	ENA5	Q12691	1091 aa		4.81	□□□□□ -1.64
NIP7	YPL211W	STE5	P32917	917 aa		4.8	□□□□□ -1.64
NIP7	YPL211W	GIC1	P38785	314 aa		4.8	□□□□□ -1.64
NIP7	YPL211W	YAP1801	P38856	637 aa		4.8	□□□□□ -1.64
NIP7	YPL211W	GIP4	P39732	760 aa		4.8	□□□□□ -1.64
NIP7	YPL211W	NPP2	P39997	493 aa		4.8	□□□□□ -1.64
NIP7	YPL211W	ZRG8	P40021	1076 aa		4.8	□□□□□ -1.64
NIP7	YPL211W	RXT3	Q07458	294 aa		4.8	□□□□□ -1.64
NIP7	YPL211W	WRS1	Q12109	432 aa	Known RBP	4.8	□□□□□ -1.64
NIP7	YPL211W	SEC7	P11075	2009 aa	Known RBP	4.79	□□□□□ -1.64
NIP7	YPL211W	YLR358C	O13565	187 aa		4.79	□□□□□ -1.64
NIP7	YPL211W	CDC6	P09119	513 aa		4.79	□□□□□ -1.64
NIP7	YPL211W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	RIP-Chip
NIP7	YPL211W	GRX1	P25373	110 aa	Known RBP	4.79	□□□□□ -1.64
NIP7	YPL211W	YCR015C	P25616	317 aa		4.79	□□□□□ -1.64
NIP7	YPL211W	CDC20	P26309	610 aa		4.79	□□□□□ -1.64
NIP7	YPL211W	NOP7	P53261	605 aa	Known RBP	4.79	□□□□□ -1.64
NIP7	YPL211W	PBP1	P53297	722 aa	Known RBP	4.79	□□□□□ -1.64
NIP7	YPL211W	SFB2	P53953	876 aa		4.79	□□□□□ -1.64
NIP7	YPL211W	SRP1	Q02821	542 aa	Known RBP	4.79	□□□□□ -1.64
NIP7	YPL211W	SRT1	Q03175	343 aa		4.79	□□□□□ -1.64
NIP7	YPL211W	YAP6	Q03935	383 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 21 ms