RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C ALD5P40047 520 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C AVT1P47082 602 aa8.1□□□□□ -1.11
UME1YPL139C ACF4P47129 309 aa8.1□□□□□ -1.11
UME1YPL139C CNM67P53865 581 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C ARK1P53974 638 aa8.1□□□□□ -1.11
UME1YPL139C ROD1Q02805 837 aa8.1□□□□□ -1.11
UME1YPL139C MUK1Q02866 612 aa8.1□□□□□ -1.11
UME1YPL139C EMI2Q04409 500 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C ALG1P16661 449 aa8.1□□□□□ -1.11
UME1YPL139C AFT1P22149 690 aa8.1□□□□□ -1.11
UME1YPL139C DRE2P36152 348 aa8.1□□□□□ -1.11
UME1YPL139C YGR035CP53222 116 aa8.1□□□□□ -1.11
UME1YPL139C TPO2P53283 614 aa8.1□□□□□ -1.11
UME1YPL139C EIS1Q05050 843 aaKnown RBP8.1□□□□□ -1.11
UME1YPL139C PSK2Q08217 1101 aa8.1□□□□□ -1.11
UME1YPL139C YOR296WQ08748 1289 aa8.1□□□□□ -1.11
UME1YPL139C YMR084WA2P2R3 262 aa8.09□□□□□ -1.12
UME1YPL139C SRD1P09007 221 aa8.09□□□□□ -1.12
UME1YPL139C PGM2P37012 569 aaKnown RBP8.09□□□□□ -1.12
UME1YPL139C MAL33P38157 468 aa8.09□□□□□ -1.12
UME1YPL139C RSC8P43609 557 aaKnown RBP8.09□□□□□ -1.12
UME1YPL139C MDR1P53258 950 aa8.09□□□□□ -1.12
UME1YPL139C SDA1P53313 767 aaKnown RBP8.09□□□□□ -1.12
UME1YPL139C FUS2Q05670 677 aa8.09□□□□□ -1.12
UME1YPL139C YLH47Q06493 454 aa8.09□□□□□ -1.12
UME1YPL139C TIP41Q12199 356 aa8.09□□□□□ -1.12
UME1YPL139C ASF1P32447 279 aa8.08□□□□□ -1.12
UME1YPL139C PET10P36139 283 aa8.08□□□□□ -1.12
UME1YPL139C GUA1P38625 525 aaKnown RBP8.08□□□□□ -1.12
UME1YPL139C EAF5P39995 279 aa8.08□□□□□ -1.12
UME1YPL139C CBK1P53894 756 aa8.08□□□□□ -1.12
UME1YPL139C PNG1Q02890 363 aa8.08□□□□□ -1.12
UME1YPL139C YEL077CQ3E7X8 1277 aa8.08□□□□□ -1.12
UME1YPL139C COX4P04037 155 aa8.07□□□□□ -1.12
UME1YPL139C SWI6P09959 803 aa8.07□□□□□ -1.12
UME1YPL139C RDS1P25611 832 aa8.07□□□□□ -1.12
UME1YPL139C FUB1P25659 250 aa8.07□□□□□ -1.12
UME1YPL139C PRX1P34227 261 aaKnown RBP8.07□□□□□ -1.12
UME1YPL139C DID4P36108 232 aa8.07□□□□□ -1.12
UME1YPL139C UBX7P38349 436 aa8.07□□□□□ -1.12
UME1YPL139C SIP3P38717 1229 aa8.07□□□□□ -1.12
UME1YPL139C INP52P50942 1183 aa8.07□□□□□ -1.12
UME1YPL139C PIL1P53252 339 aaKnown RBP8.07□□□□□ -1.12
UME1YPL139C YDL057WQ07379 328 aa8.07□□□□□ -1.12
UME1YPL139C SMC6Q12749 1114 aa8.07□□□□□ -1.12
UME1YPL139C ADE4P04046 510 aaKnown RBP8.06□□□□□ -1.12
UME1YPL139C TMT1P32643 299 aa8.06□□□□□ -1.12
UME1YPL139C YHR131CP38835 850 aa8.06□□□□□ -1.12
UME1YPL139C OPT1P40897 799 aa8.06□□□□□ -1.12
UME1YPL139C ROG3P43602 733 aa8.06□□□□□ -1.12
UME1YPL139C NOC3Q07896 663 aaPredicted RBP8.06□□□□□ -1.12
UME1YPL139C ISY1P21374 235 aaPredicted RBP8.05□□□□□ -1.12
UME1YPL139C URK1P27515 501 aa8.05□□□□□ -1.12
UME1YPL139C SLX1P38324 304 aa8.05□□□□□ -1.12
UME1YPL139C FMP10P40098 244 aa8.05□□□□□ -1.12
UME1YPL139C GCV2P49095 1034 aa8.05□□□□□ -1.12
UME1YPL139C UBA2P52488 636 aa8.05□□□□□ -1.12
UME1YPL139C GUP1P53154 560 aa8.05□□□□□ -1.12
UME1YPL139C ENV11P53246 860 aa8.05□□□□□ -1.12
UME1YPL139C MMR1Q06324 491 aa8.05□□□□□ -1.12
UME1YPL139C MAG2Q06436 670 aaKnown RBP8.05□□□□□ -1.12
UME1YPL139C RGP1P16664 663 aa8.04□□□□□ -1.12
UME1YPL139C PFK1P16861 987 aaKnown RBP8.04□□□□□ -1.12
UME1YPL139C ADE2P21264 571 aaKnown RBP8.04□□□□□ -1.12
UME1YPL139C TTI1P36097 1038 aa8.04□□□□□ -1.12
UME1YPL139C YIR014WP40570 242 aa8.04□□□□□ -1.12
UME1YPL139C SPO74P45819 413 aa8.04□□□□□ -1.12
UME1YPL139C MNP1P53163 194 aaPredicted RBP8.04□□□□□ -1.12
UME1YPL139C YNL146WP53906 100 aa8.04□□□□□ -1.12
UME1YPL139C NCS2P53923 493 aaPredicted RBP8.04□□□□□ -1.12
UME1YPL139C SMC5Q08204 1093 aa8.04□□□□□ -1.12
UME1YPL139C ZPS1Q12512 249 aa8.04□□□□□ -1.12
UME1YPL139C NBL1Q3E7Y6 73 aa8.04□□□□□ -1.12
UME1YPL139C PRC1P00729 532 aa8.03□□□□□ -1.12
UME1YPL139C TCP1P12612 559 aaKnown RBP8.03□□□□□ -1.12
UME1YPL139C PGI1P12709 554 aaKnown RBP8.03□□□□□ -1.12
UME1YPL139C YEL1P34225 687 aa8.03□□□□□ -1.12
UME1YPL139C RPN3P40016 523 aaKnown RBP8.03□□□□□ -1.12
UME1YPL139C THI6P41835 540 aa8.03□□□□□ -1.12
UME1YPL139C DAK2P43550 591 aa8.03□□□□□ -1.12
UME1YPL139C YGL081WP53156 320 aa8.03□□□□□ -1.12
UME1YPL139C IES4Q08561 116 aa8.03□□□□□ -1.12
UME1YPL139C YLR422WQ06409 1932 aa8.02□□□□□ -1.13
UME1YPL139C HIS4P00815 799 aaKnown RBP8.02□□□□□ -1.13
UME1YPL139C HXK1P04806 485 aaKnown RBP8.02□□□□□ -1.13
UME1YPL139C WHI2P12611 486 aa8.02□□□□□ -1.13
UME1YPL139C FRS2P15625 503 aaKnown RBP8.02□□□□□ -1.13
UME1YPL139C MCM3P24279 971 aaKnown RBP8.02□□□□□ -1.13
UME1YPL139C RAM2P29703 316 aa8.02□□□□□ -1.13
UME1YPL139C YHL026CP38740 315 aa8.02□□□□□ -1.13
UME1YPL139C TAM41P53230 385 aa8.02□□□□□ -1.13
UME1YPL139C RTT102P53330 157 aa8.02□□□□□ -1.13
UME1YPL139C DOT1Q04089 582 aaKnown RBP8.02□□□□□ -1.13
UME1YPL139C COG8Q04632 607 aa8.02□□□□□ -1.13
UME1YPL139C HRQ1Q05549 1077 aa8.02□□□□□ -1.13
UME1YPL139C ISU2Q12056 156 aa8.02□□□□□ -1.13
UME1YPL139C TOM70P07213 617 aaKnown RBP8.01□□□□□ -1.13
UME1YPL139C PCT1P13259 424 aa8.01□□□□□ -1.13
UME1YPL139C GLN3P18494 730 aa8.01□□□□□ -1.13
UME1YPL139C COQ8P27697 501 aa8.01□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms