RNA–Protein interactions for RNA: YOR260W

GCD1, Transcript of Gamma subunit of the translation initiation factor eIF2B, yeast

Gene GCD1, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GCD1	YOR260W	HFM1	P51979	1187 aa		4.86	□□□□□ -1.63
GCD1	YOR260W	MTC3	P53077	123 aa		4.86	□□□□□ -1.63
GCD1	YOR260W	YDL121C	Q07541	149 aa		4.86	□□□□□ -1.63
GCD1	YOR260W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.86	□□□□□ -1.63	not detected
GCD1	YOR260W	MPP10	P47083	593 aa	Known RBP	4.86	□□□□□ -1.63
GCD1	YOR260W	PBP1	P53297	722 aa	Known RBP	4.86	□□□□□ -1.63
GCD1	YOR260W	GPB1	Q08886	897 aa		4.86	□□□□□ -1.63
GCD1	YOR260W	SSN2	P38931	1420 aa		4.85	□□□□□ -1.63
GCD1	YOR260W	TSR4	P25040	408 aa		4.85	□□□□□ -1.63
GCD1	YOR260W	YKL151C	P36059	337 aa		4.85	□□□□□ -1.63
GCD1	YOR260W	YBR184W	P38299	523 aa		4.85	□□□□□ -1.63
GCD1	YOR260W	NNF1	P47149	201 aa		4.85	□□□□□ -1.63
GCD1	YOR260W	RXT3	Q07458	294 aa		4.85	□□□□□ -1.63
GCD1	YOR260W	ACK1	Q07622	623 aa	Predicted RBP	4.85	□□□□□ -1.63
GCD1	YOR260W	CDC20	P26309	610 aa		4.84	□□□□□ -1.63
GCD1	YOR260W	CTS1	P29029	562 aa		4.84	□□□□□ -1.63
GCD1	YOR260W	SHE9	Q04172	456 aa		4.84	□□□□□ -1.63
GCD1	YOR260W	HRQ1	Q05549	1077 aa		4.84	□□□□□ -1.63
GCD1	YOR260W	XYL2	Q07993	356 aa		4.84	□□□□□ -1.63
GCD1	YOR260W	YOL057W	Q08225	711 aa		4.84	□□□□□ -1.63
GCD1	YOR260W	YLL058W	Q12198	575 aa		4.84	□□□□□ -1.63
GCD1	YOR260W	VPS62	P53285	467 aa		4.83	□□□□□ -1.64
GCD1	YOR260W	HMI1	Q12039	706 aa		4.83	□□□□□ -1.64
GCD1	YOR260W	INO80	P53115	1489 aa		4.83	□□□□□ -1.64
GCD1	YOR260W	GTF1	P53260	183 aa	Predicted RBP	4.83	□□□□□ -1.64
GCD1	YOR260W	SVL3	Q03088	825 aa	Known RBP	4.83	□□□□□ -1.64
GCD1	YOR260W	YAP6	Q03935	383 aa		4.83	□□□□□ -1.64
GCD1	YOR260W	NFU1	P32860	256 aa		4.82	□□□□□ -1.64
GCD1	YOR260W	SHM2	P37291	469 aa	Known RBP	4.82	□□□□□ -1.64
GCD1	YOR260W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	RIP-Chip
GCD1	YOR260W	ERP2	P39704	215 aa		4.82	□□□□□ -1.64
GCD1	YOR260W	MND2	P40577	368 aa		4.82	□□□□□ -1.64
GCD1	YOR260W	MDM38	Q08179	573 aa		4.82	□□□□□ -1.64
GCD1	YOR260W	DEF1	P35732	738 aa	Known RBP	4.81	□□□□□ -1.64
GCD1	YOR260W	YAP1801	P38856	637 aa		4.81	□□□□□ -1.64
GCD1	YOR260W	PFD1	P46988	109 aa		4.81	□□□□□ -1.64
GCD1	YOR260W	GCV2	P49095	1034 aa		4.81	□□□□□ -1.64
GCD1	YOR260W	DNM1	P54861	757 aa		4.81	□□□□□ -1.64
GCD1	YOR260W	OSW2	Q12202	724 aa		4.81	□□□□□ -1.64
GCD1	YOR260W	RAD4	P14736	754 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	EMC1	P25574	760 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	LST4	P34239	828 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	MRP8	P35719	219 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	ZRG8	P40021	1076 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	SRT1	Q03175	343 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	ECM16	Q04217	1267 aa	Known RBP	4.8	□□□□□ -1.64
GCD1	YOR260W	CIT2	P08679	460 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	SSB1	P11484	613 aa	Known RBP	4.8	□□□□□ -1.64
GCD1	YOR260W	STE11	P23561	717 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	FUN30	P31380	1131 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	GIC1	P38785	314 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	SSB2	P40150	613 aa	Known RBP	4.8	□□□□□ -1.64
GCD1	YOR260W	IRR1	P40541	1150 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	TLG1	Q03322	224 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	TMA10	Q06177	86 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	ADY3	Q07732	790 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	FMP25	Q08023	583 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	NOP12	Q08208	459 aa	Known RBP	4.8	□□□□□ -1.64
GCD1	YOR260W	PSK2	Q08217	1101 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	YOL098C	Q12496	1037 aa		4.8	□□□□□ -1.64
GCD1	YOR260W	CDC12	P32468	407 aa	Known RBP	4.79	□□□□□ -1.64
GCD1	YOR260W	GRX4	P32642	244 aa		4.79	□□□□□ -1.64
GCD1	YOR260W	PBY1	P38254	753 aa		4.79	□□□□□ -1.64
GCD1	YOR260W	SAH1	P39954	449 aa	Known RBP	4.79	□□□□□ -1.64
GCD1	YOR260W	IOC3	P43596	787 aa		4.79	□□□□□ -1.64
GCD1	YOR260W	TMA64	Q04600	565 aa	Known RBP	4.79	□□□□□ -1.64
GCD1	YOR260W	YLR224W	Q05947	369 aa		4.79	□□□□□ -1.64
GCD1	YOR260W	TPO1	Q07824	586 aa		4.79	□□□□□ -1.64
GCD1	YOR260W	ENA1	P13587	1091 aa		4.78	□□□□□ -1.64
GCD1	YOR260W	RPL8B	P29453	256 aa	Known RBP	4.78	□□□□□ -1.64
GCD1	YOR260W	POA1	P38218	177 aa		4.78	□□□□□ -1.64
GCD1	YOR260W	NPP2	P39997	493 aa		4.78	□□□□□ -1.64
GCD1	YOR260W	ALG12	P53730	551 aa		4.78	□□□□□ -1.64
GCD1	YOR260W	ENA2	Q01896	1091 aa		4.78	□□□□□ -1.64
GCD1	YOR260W	NAN1	Q02931	896 aa	Known RBP	4.78	□□□□□ -1.64
GCD1	YOR260W	GRX3	Q03835	250 aa		4.78	□□□□□ -1.64
GCD1	YOR260W	YDR306C	Q06640	478 aa		4.78	□□□□□ -1.64
GCD1	YOR260W	ENA5	Q12691	1091 aa		4.78	□□□□□ -1.64
GCD1	YOR260W	ECM21	P38167	1117 aa	Known RBP	4.77	□□□□□ -1.65
GCD1	YOR260W	ENP1	P38333	483 aa	Known RBP	4.77	□□□□□ -1.65
GCD1	YOR260W	MET12	P46151	657 aa		4.77	□□□□□ -1.65
GCD1	YOR260W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
GCD1	YOR260W	HUL5	P53119	910 aa		4.77	□□□□□ -1.65
GCD1	YOR260W	YGR012W	P53206	393 aa		4.77	□□□□□ -1.65
GCD1	YOR260W	MEH1	Q02205	184 aa		4.77	□□□□□ -1.65
GCD1	YOR260W	SRP1	Q02821	542 aa	Known RBP	4.77	□□□□□ -1.65
GCD1	YOR260W	DUS3	Q06053	668 aa	Known RBP	4.77	□□□□□ -1.65
GCD1	YOR260W	CDA1	Q06702	301 aa		4.77	□□□□□ -1.65
GCD1	YOR260W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.77	□□□□□ -1.65	not detected
GCD1	YOR260W	HBS1	P32769	611 aa	Known RBP	4.77	□□□□□ -1.65
GCD1	YOR260W	RRP14	P36080	434 aa	Known RBP	4.77	□□□□□ -1.65
GCD1	YOR260W	FPR3	P38911	411 aa	Known RBP	4.77	□□□□□ -1.65
GCD1	YOR260W	VPS27	P40343	622 aa	Known RBP	4.77	□□□□□ -1.65
GCD1	YOR260W	HOS4	P40480	1083 aa		4.77	□□□□□ -1.65
GCD1	YOR260W	TIM54	P47045	478 aa		4.77	□□□□□ -1.65
GCD1	YOR260W	MNN10	P50108	393 aa	Known RBP	4.77	□□□□□ -1.65
GCD1	YOR260W	COG4	Q06096	861 aa		4.77	□□□□□ -1.65
GCD1	YOR260W	PPG1	P32838	368 aa		4.76	□□□□□ -1.65
GCD1	YOR260W	ERT1	P38140	529 aa		4.76	□□□□□ -1.65
GCD1	YOR260W	YHR020W	P38708	688 aa	Known RBP	4.76	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 9.4 ms