RNA–Protein interactions for RNA: YOL090W

MSH2, Transcript of Protein that binds to DNA mismatches, yeastyeast

Gene MSH2, Length 2,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH2YOL090W OAF1P39720 1047 aaPredicted RBP3.62□□□□□ -1.83
MSH2YOL090W RVS167P39743 482 aaKnown RBP3.62□□□□□ -1.83
MSH2YOL090W VPS30Q02948 557 aa3.62□□□□□ -1.83
MSH2YOL090W TIF35Q04067 274 aaKnown RBP3.62□□□□□ -1.83
MSH2YOL090W EMG1Q06287 252 aaKnown RBP3.62□□□□□ -1.83
MSH2YOL090W PSH1Q12161 406 aa3.62□□□□□ -1.83
MSH2YOL090W SNQ2P32568 1501 aaKnown RBP3.62□□□□□ -1.83
MSH2YOL090W INO1P11986 533 aa3.61□□□□□ -1.83
MSH2YOL090W STO1P34160 861 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W DYS1P38791 387 aa3.61□□□□□ -1.83
MSH2YOL090W ACA1P39970 489 aa3.61□□□□□ -1.83
MSH2YOL090W VTC2P43585 828 aa3.61□□□□□ -1.83
MSH2YOL090W DUG1P43616 481 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W JJJ2P46997 583 aa3.61□□□□□ -1.83
MSH2YOL090W LCB5Q06147 687 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W UTP4Q06679 776 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W NAT1P12945 854 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W PRP9P19736 530 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W SFL1P20134 766 aa3.61□□□□□ -1.83
MSH2YOL090W BEM3P32873 1128 aa3.61□□□□□ -1.83
MSH2YOL090W NUP120P35729 1037 aa3.61□□□□□ -1.83
MSH2YOL090W RIM4P38741 713 aa3.61□□□□□ -1.83
MSH2YOL090W UBP6P43593 499 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W ROD1Q02805 837 aa3.61□□□□□ -1.83
MSH2YOL090W TSR2Q06672 205 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W STU1P38198 1513 aa3.61□□□□□ -1.83
MSH2YOL090W TY3B-GQ99315 1547 aa3.61□□□□□ -1.83
MSH2YOL090W DAT1P13483 248 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W MSD1P15179 658 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W TPM1P17536 199 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W AEP2P22136 580 aa3.61□□□□□ -1.83
MSH2YOL090W YKL133CP36066 463 aa3.61□□□□□ -1.83
MSH2YOL090W FIR1P40020 876 aa3.61□□□□□ -1.83
MSH2YOL090W QRI7P43122 407 aa3.61□□□□□ -1.83
MSH2YOL090W RSM26P47141 266 aa3.61□□□□□ -1.83
MSH2YOL090W YNR040WP53736 256 aa3.61□□□□□ -1.83
MSH2YOL090W NOG1Q02892 647 aaKnown RBP3.61□□□□□ -1.83
MSH2YOL090W CLF1Q12309 687 aaPredicted RBP3.61□□□□□ -1.83
MSH2YOL090W CYB2P00175 591 aa3.6□□□□□ -1.83
MSH2YOL090W TOM70P07213 617 aaKnown RBP3.6□□□□□ -1.83
MSH2YOL090W RAD18P10862 487 aa3.6□□□□□ -1.83
MSH2YOL090W PYC2P32327 1180 aaKnown RBP3.6□□□□□ -1.83
MSH2YOL090W HEM12P32347 362 aaPredicted RBP3.6□□□□□ -1.83
MSH2YOL090W PRP19P32523 503 aaKnown RBP3.6□□□□□ -1.83
MSH2YOL090W NOP4P37838 685 aaKnown RBP3.6□□□□□ -1.83
MSH2YOL090W DOT6P40059 670 aaKnown RBP3.6□□□□□ -1.83
MSH2YOL090W MEP1P40260 492 aa3.6□□□□□ -1.83
MSH2YOL090W UPF3P48412 387 aaKnown RBP3.6□□□□□ -1.83
MSH2YOL090W YGR016WP53209 190 aa3.6□□□□□ -1.83
MSH2YOL090W CTF4Q01454 927 aa3.6□□□□□ -1.83
MSH2YOL090W YLR352WQ06479 807 aa3.6□□□□□ -1.83
MSH2YOL090W IMH1Q06704 911 aaKnown RBP3.6□□□□□ -1.83
MSH2YOL090W TSC11P40061 1430 aa3.6□□□□□ -1.83
MSH2YOL090W SIS1P25294 352 aaKnown RBP3.6□□□□□ -1.83
MSH2YOL090W MSH3P25336 1018 aa3.6□□□□□ -1.83
MSH2YOL090W YGL176CP46945 554 aa3.6□□□□□ -1.83
MSH2YOL090W MOT3P54785 490 aaKnown RBP3.6□□□□□ -1.83
MSH2YOL090W SRC1Q03707 834 aa3.6□□□□□ -1.83
MSH2YOL090W PHM6Q05637 104 aa3.6□□□□□ -1.83
MSH2YOL090W BRE4Q07660 1125 aa3.6□□□□□ -1.83
MSH2YOL090W RAD53P22216 821 aa3.59□□□□□ -1.83
MSH2YOL090W SAH1P39954 449 aaKnown RBP3.59□□□□□ -1.83
MSH2YOL090W SIP5P40210 489 aaKnown RBP3.59□□□□□ -1.83
MSH2YOL090W TMA108P40462 946 aa3.59□□□□□ -1.83
MSH2YOL090W AAD14P42884 376 aa3.59□□□□□ -1.83
MSH2YOL090W GTR1Q00582 310 aa3.59□□□□□ -1.83
MSH2YOL090W EIS1Q05050 843 aaKnown RBP3.59□□□□□ -1.83
MSH2YOL090W IQG1Q12280 1495 aa3.59□□□□□ -1.84
MSH2YOL090W TRK1P12685 1235 aa3.59□□□□□ -1.84
MSH2YOL090W SPO16P17122 198 aa3.59□□□□□ -1.84
MSH2YOL090W SAN1P22470 610 aa3.59□□□□□ -1.84
MSH2YOL090W PDC6P26263 563 aaKnown RBP3.59□□□□□ -1.84
MSH2YOL090W SPC29P33419 253 aa3.59□□□□□ -1.84
MSH2YOL090W BCD1P38772 366 aa3.59□□□□□ -1.84
MSH2YOL090W CKB2P38930 258 aa3.59□□□□□ -1.84
MSH2YOL090W YJL171CP46992 396 aa3.59□□□□□ -1.84
MSH2YOL090W PEX13P80667 386 aa3.59□□□□□ -1.84
MSH2YOL090W NBA1Q08229 501 aaKnown RBP3.59□□□□□ -1.84
MSH2YOL090W IRE1P32361 1115 aa3.58□□□□□ -1.84
MSH2YOL090W VPH1P32563 840 aaKnown RBP3.58□□□□□ -1.84
MSH2YOL090W DLD1P32891 587 aa3.58□□□□□ -1.84
MSH2YOL090W SQT1P35184 431 aa3.58□□□□□ -1.84
MSH2YOL090W TBS1P38114 1094 aa3.58□□□□□ -1.84
MSH2YOL090W GIP1P38229 639 aa3.58□□□□□ -1.84
MSH2YOL090W RIM11P38615 370 aa3.58□□□□□ -1.84
MSH2YOL090W PCM1P38628 557 aaKnown RBP3.58□□□□□ -1.84
MSH2YOL090W SGM1P47166 707 aa3.58□□□□□ -1.84
MSH2YOL090W MSB3P48566 633 aaPredicted RBP3.58□□□□□ -1.84
MSH2YOL090W MSN5P52918 1224 aa3.58□□□□□ -1.84
MSH2YOL090W CEG1Q01159 459 aaPredicted RBP3.58□□□□□ -1.84
MSH2YOL090W PKH1Q03407 766 aa3.58□□□□□ -1.84
MSH2YOL090W YTM1Q12024 460 aaPredicted RBP3.58□□□□□ -1.84
MSH2YOL090W MRP10O75012 95 aa3.58□□□□□ -1.84
MSH2YOL090W HSP82P02829 709 aaKnown RBP3.58□□□□□ -1.84
MSH2YOL090W VMA8P32610 256 aaKnown RBP3.58□□□□□ -1.84
MSH2YOL090W ANP1P32629 500 aa3.58□□□□□ -1.84
MSH2YOL090W BCK2P33306 851 aa3.58□□□□□ -1.84
MSH2YOL090W SER1P33330 395 aaKnown RBP3.58□□□□□ -1.84
MSH2YOL090W DHR2P36009 735 aaPredicted RBP3.58□□□□□ -1.84
MSH2YOL090W PET10P36139 283 aa3.58□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms