RNA–Protein interactions for RNA: YML112W

CTK3, Transcript of Gamma subunit of C-terminal domain kinase I, yeastyeast

Gene CTK3, Length 891 nt, Biotype protein coding.

RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK3YML112W TUB2P02557 457 aaKnown RBP4.19□□□□□ -1.74
CTK3YML112W HSF1P10961 833 aa4.19□□□□□ -1.74
CTK3YML112W HCM1P25364 564 aa4.19□□□□□ -1.74
CTK3YML112W SRP101P32916 621 aa4.19□□□□□ -1.74
CTK3YML112W PBY1P38254 753 aa4.19□□□□□ -1.74
CTK3YML112W SPF1P39986 1215 aaKnown RBP4.19□□□□□ -1.74
CTK3YML112W IRR1P40541 1150 aa4.19□□□□□ -1.74
CTK3YML112W GUS1P46655 708 aaKnown RBP RIP-Chip data4.19□□□□□ -1.74not detected
CTK3YML112W GYP7P48365 746 aa4.19□□□□□ -1.74
CTK3YML112W GSF2Q04697 403 aaKnown RBP4.19□□□□□ -1.74
CTK3YML112W TDA5Q06417 326 aaKnown RBP4.19□□□□□ -1.74
CTK3YML112W ADE8P04161 214 aa4.18□□□□□ -1.74
CTK3YML112W RPP2AP05319 106 aaKnown RBP4.18□□□□□ -1.74
CTK3YML112W PPH3P32345 308 aa4.18□□□□□ -1.74
CTK3YML112W AAR2P32357 355 aaPredicted RBP4.18□□□□□ -1.74
CTK3YML112W STE5P32917 917 aa4.18□□□□□ -1.74
CTK3YML112W PSP2P50109 593 aaKnown RBP4.18□□□□□ -1.74
CTK3YML112W SPE1P08432 466 aa4.17□□□□□ -1.74
CTK3YML112W GRX1P25373 110 aaKnown RBP4.17□□□□□ -1.74
CTK3YML112W RPC82P32349 654 aa4.17□□□□□ -1.74
CTK3YML112W TRM2P33753 639 aa4.17□□□□□ -1.74
CTK3YML112W YBR184WP38299 523 aa4.17□□□□□ -1.74
CTK3YML112W CCC2P38995 1004 aa4.17□□□□□ -1.74
CTK3YML112W PHO23P50947 330 aa4.17□□□□□ -1.74
CTK3YML112W YPR196WQ06595 470 aa4.17□□□□□ -1.74
CTK3YML112W WRS1Q12109 432 aaKnown RBP4.17□□□□□ -1.74
CTK3YML112W DCG1P32460 244 aa4.16□□□□□ -1.74
CTK3YML112W YKR078WP36158 585 aaKnown RBP4.16□□□□□ -1.74
CTK3YML112W YRO2P38079 344 aa4.16□□□□□ -1.74
CTK3YML112W TSL1P38427 1098 aaKnown RBP4.16□□□□□ -1.74
CTK3YML112W YER158CP40095 573 aa4.16□□□□□ -1.74
CTK3YML112W NTO1Q12311 748 aa4.16□□□□□ -1.74
CTK3YML112W PMA1P05030 918 aaKnown RBP4.15□□□□□ -1.75
CTK3YML112W NPP1P25353 742 aa4.15□□□□□ -1.75
CTK3YML112W ATG19P35193 415 aa4.15□□□□□ -1.75
CTK3YML112W CDC48P25694 835 aaKnown RBP4.14□□□□□ -1.75
CTK3YML112W AFR1P33304 620 aa4.14□□□□□ -1.75
CTK3YML112W SIT1P39980 628 aa4.14□□□□□ -1.75
CTK3YML112W URM1P40554 99 aaPredicted RBP4.14□□□□□ -1.75
CTK3YML112W IOC3P43596 787 aa4.14□□□□□ -1.75
CTK3YML112W YKE2P52553 114 aa4.14□□□□□ -1.75
CTK3YML112W TPO2P53283 614 aa4.14□□□□□ -1.75
CTK3YML112W WHI4Q07655 649 aaKnown RBP4.14□□□□□ -1.75
CTK3YML112W PUS9Q12069 462 aa4.14□□□□□ -1.75
CTK3YML112W PNS1Q12412 539 aa4.14□□□□□ -1.75
CTK3YML112W KCS1Q12494 1050 aa4.14□□□□□ -1.75
CTK3YML112W NOT3P06102 836 aaKnown RBP4.13□□□□□ -1.75
CTK3YML112W PRP9P19736 530 aaKnown RBP4.13□□□□□ -1.75
CTK3YML112W HBS1P32769 611 aaKnown RBP4.13□□□□□ -1.75
CTK3YML112W EXG2P52911 562 aa4.13□□□□□ -1.75
CTK3YML112W RAI1P53063 387 aaKnown RBP4.13□□□□□ -1.75
CTK3YML112W NCS6P53088 359 aa4.13□□□□□ -1.75
CTK3YML112W FMP25Q08023 583 aa4.13□□□□□ -1.75
CTK3YML112W SSF2Q12153 453 aaPredicted RBP4.13□□□□□ -1.75
CTK3YML112W PMI40P29952 429 aaKnown RBP4.12□□□□□ -1.75
CTK3YML112W YBR238CP38330 731 aaKnown RBP4.12□□□□□ -1.75
CTK3YML112W ALR2P43553 858 aa4.12□□□□□ -1.75
CTK3YML112W PFD1P46988 109 aa4.12□□□□□ -1.75
CTK3YML112W MSE1P48525 536 aa4.12□□□□□ -1.75
CTK3YML112W NOP7P53261 605 aaKnown RBP4.12□□□□□ -1.75
CTK3YML112W UTP8P53276 713 aaKnown RBP4.12□□□□□ -1.75
CTK3YML112W SUN4P53616 420 aa4.12□□□□□ -1.75
CTK3YML112W SPO75Q07798 868 aa4.12□□□□□ -1.75
CTK3YML112W NPC2Q12408 173 aa4.12□□□□□ -1.75
CTK3YML112W PFK1P16861 987 aaKnown RBP4.11□□□□□ -1.75
CTK3YML112W RPL8BP29453 256 aaKnown RBP4.11□□□□□ -1.75
CTK3YML112W CDC11P32458 415 aa4.11□□□□□ -1.75
CTK3YML112W DEF1P35732 738 aaKnown RBP4.11□□□□□ -1.75
CTK3YML112W CCM1P48237 864 aaPredicted RBP4.11□□□□□ -1.75
CTK3YML112W LCD1Q04377 747 aa4.11□□□□□ -1.75
CTK3YML112W EAF1Q06337 982 aa4.11□□□□□ -1.75
CTK3YML112W URN1Q06525 465 aaKnown RBP4.11□□□□□ -1.75
CTK3YML112W UPC2Q12151 913 aa4.11□□□□□ -1.75
CTK3YML112W YPR071WQ12346 211 aa4.11□□□□□ -1.75
CTK3YML112W STE13P33894 931 aa4.1□□□□□ -1.75
CTK3YML112W ERT1P38140 529 aa4.1□□□□□ -1.75
CTK3YML112W YBR284WP38150 797 aa4.1□□□□□ -1.75
CTK3YML112W TOK1P40310 691 aa4.1□□□□□ -1.75
CTK3YML112W NAN1Q02931 896 aaKnown RBP4.1□□□□□ -1.75
CTK3YML112W BUL2Q03758 920 aaKnown RBP4.1□□□□□ -1.75
CTK3YML112W SSL1Q04673 461 aaPredicted RBP4.1□□□□□ -1.75
CTK3YML112W GUP2Q08929 609 aa4.1□□□□□ -1.75
CTK3YML112W RFA1P22336 621 aaKnown RBP4.09□□□□□ -1.75
CTK3YML112W SED4P25365 1065 aa4.09□□□□□ -1.75
CTK3YML112W KAR4P25583 335 aa4.09□□□□□ -1.75
CTK3YML112W SCT1P32784 759 aa4.09□□□□□ -1.75
CTK3YML112W REC104P33323 182 aa4.09□□□□□ -1.75
CTK3YML112W MSS4P38994 779 aa4.09□□□□□ -1.75
CTK3YML112W AIM21P40563 679 aa4.09□□□□□ -1.75
CTK3YML112W VPS30Q02948 557 aa4.09□□□□□ -1.75
CTK3YML112W UBX5Q06682 500 aa4.09□□□□□ -1.75
CTK3YML112W AIM39Q08223 395 aa4.09□□□□□ -1.75
CTK3YML112W ENB1Q08299 606 aa4.09□□□□□ -1.75
CTK3YML112W RAD4P14736 754 aa4.08□□□□□ -1.76
CTK3YML112W CAD1P24813 409 aaKnown RBP4.08□□□□□ -1.76
CTK3YML112W ARE1P25628 610 aa4.08□□□□□ -1.76
CTK3YML112W RPD3P32561 433 aa4.08□□□□□ -1.76
CTK3YML112W STE14P32584 239 aa4.08□□□□□ -1.76
CTK3YML112W ERP6P53198 216 aa4.08□□□□□ -1.76
CTK3YML112W SLI1P53304 468 aa4.08□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms