RNA–Protein interactions for RNA: YML041C

VPS71, Transcript of Nucleosome-binding component of the SWR1 complex, yeastyeast

Gene VPS71, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS71YML041C SRD1P09007 221 aa5.65□□□□□ -1.5
VPS71YML041C YCK2P23292 546 aaKnown RBP5.65□□□□□ -1.5
VPS71YML041C GSY1P23337 708 aa5.65□□□□□ -1.5
VPS71YML041C PCL2P25693 308 aa5.65□□□□□ -1.5
VPS71YML041C GIC1P38785 314 aa5.65□□□□□ -1.5
VPS71YML041C DSS1P39112 969 aa5.65□□□□□ -1.5
VPS71YML041C CCM1P48237 864 aaPredicted RBP5.65□□□□□ -1.5
VPS71YML041C YVC1Q12324 675 aa5.65□□□□□ -1.5
VPS71YML041C SSD1P24276 1250 aaKnown RBP RIP-Chip data5.64□□□□□ -1.51not detected
VPS71YML041C SRO9P25567 434 aaKnown RBP5.64□□□□□ -1.51
VPS71YML041C RSC6P25632 483 aa5.64□□□□□ -1.51
VPS71YML041C YGR237CP50089 785 aa5.64□□□□□ -1.51
VPS71YML041C MET13P53128 600 aa5.64□□□□□ -1.51
VPS71YML041C FOL1P53848 824 aa5.64□□□□□ -1.51
VPS71YML041C SRT1Q03175 343 aa5.64□□□□□ -1.51
VPS71YML041C YDR215CQ12240 137 aa5.64□□□□□ -1.51
VPS71YML041C ACE2P21192 770 aa5.63□□□□□ -1.51
VPS71YML041C SLN1P39928 1220 aaPredicted RBP5.63□□□□□ -1.51
VPS71YML041C RRT14P40470 206 aa5.63□□□□□ -1.51
VPS71YML041C GPP1P41277 250 aaKnown RBP5.63□□□□□ -1.51
VPS71YML041C ARI1P53111 347 aaKnown RBP5.63□□□□□ -1.51
VPS71YML041C DAM1P53267 343 aa5.63□□□□□ -1.51
VPS71YML041C UME1Q03010 460 aa5.63□□□□□ -1.51
VPS71YML041C COG8Q04632 607 aa5.63□□□□□ -1.51
VPS71YML041C TMA17Q12513 150 aa5.63□□□□□ -1.51
VPS71YML041C MCD4P36051 919 aa5.62□□□□□ -1.51
VPS71YML041C PEX7P39108 375 aa5.62□□□□□ -1.51
VPS71YML041C HXT16P47185 567 aa5.62□□□□□ -1.51
VPS71YML041C PEX8P53248 589 aa5.62□□□□□ -1.51
VPS71YML041C RSC3Q06639 885 aa5.62□□□□□ -1.51
VPS71YML041C COQ4O13525 335 aa5.61□□□□□ -1.51
VPS71YML041C FUN30P31380 1131 aa5.61□□□□□ -1.51
VPS71YML041C TYS1P36421 394 aaKnown RBP5.61□□□□□ -1.51
VPS71YML041C ABZ1P37254 787 aaPredicted RBP5.61□□□□□ -1.51
VPS71YML041C PCM1P38628 557 aaKnown RBP5.61□□□□□ -1.51
VPS71YML041C PRY1P47032 299 aa5.61□□□□□ -1.51
VPS71YML041C HFM1P51979 1187 aa5.61□□□□□ -1.51
VPS71YML041C SDA1P53313 767 aaKnown RBP5.61□□□□□ -1.51
VPS71YML041C MTQ2Q03920 221 aaPredicted RBP5.61□□□□□ -1.51
VPS71YML041C RSC58Q07979 502 aa5.61□□□□□ -1.51
VPS71YML041C YOL057WQ08225 711 aa5.61□□□□□ -1.51
VPS71YML041C MET7Q08645 548 aa5.61□□□□□ -1.51
VPS71YML041C SFL1P20134 766 aa5.6□□□□□ -1.51
VPS71YML041C CDC48P25694 835 aaKnown RBP5.6□□□□□ -1.51
VPS71YML041C MDL2P33311 773 aa5.6□□□□□ -1.51
VPS71YML041C STO1P34160 861 aaKnown RBP5.6□□□□□ -1.51
VPS71YML041C YER158CP40095 573 aa5.6□□□□□ -1.51
VPS71YML041C YJR120WP47157 116 aa5.6□□□□□ -1.51
VPS71YML041C SFB2P53953 876 aa5.6□□□□□ -1.51
VPS71YML041C RAD18P10862 487 aa5.59□□□□□ -1.51
VPS71YML041C MIH1P23748 554 aa5.59□□□□□ -1.51
VPS71YML041C NAM7P30771 971 aaKnown RBP5.59□□□□□ -1.51
VPS71YML041C EUG1P32474 517 aa5.59□□□□□ -1.51
VPS71YML041C YBR071WP38243 211 aa5.59□□□□□ -1.51
VPS71YML041C YHL012WP38709 493 aa5.59□□□□□ -1.51
VPS71YML041C TPM2P40414 161 aa5.59□□□□□ -1.51
VPS71YML041C COG6P53959 839 aa5.59□□□□□ -1.51
VPS71YML041C ALO1P54783 526 aaKnown RBP5.59□□□□□ -1.51
VPS71YML041C SNP1Q00916 300 aaPredicted RBP5.59□□□□□ -1.51
VPS71YML041C ATG33Q06485 197 aa5.59□□□□□ -1.51
VPS71YML041C RPC82P32349 654 aa5.58□□□□□ -1.52
VPS71YML041C PGM1P33401 570 aaKnown RBP5.58□□□□□ -1.52
VPS71YML041C YJR096WP47137 282 aa5.58□□□□□ -1.52
VPS71YML041C XYL2Q07993 356 aa5.58□□□□□ -1.52
VPS71YML041C MCA1Q08601 432 aa5.58□□□□□ -1.52
VPS71YML041C NUP145P49687 1317 aa5.57□□□□□ -1.52
VPS71YML041C HOG1P32485 435 aa5.57□□□□□ -1.52
VPS71YML041C WHI3P34761 661 aaKnown RBP5.57□□□□□ -1.52
VPS71YML041C GRX7P38068 203 aa5.57□□□□□ -1.52
VPS71YML041C ECM21P38167 1117 aaKnown RBP5.57□□□□□ -1.52
VPS71YML041C CCZ1P38273 704 aa5.57□□□□□ -1.52
VPS71YML041C YAP1801P38856 637 aa5.57□□□□□ -1.52
VPS71YML041C MMM1P41800 426 aa5.57□□□□□ -1.52
VPS71YML041C OYE3P41816 400 aaPredicted RBP5.57□□□□□ -1.52
VPS71YML041C HDA1P53973 706 aa5.57□□□□□ -1.52
VPS71YML041C TGL2P54857 326 aa5.57□□□□□ -1.52
VPS71YML041C VPS72Q03388 795 aa5.57□□□□□ -1.52
VPS71YML041C YDR514CQ04408 483 aa5.57□□□□□ -1.52
VPS71YML041C HFD1Q04458 532 aa5.57□□□□□ -1.52
VPS71YML041C PUF3Q07807 879 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
VPS71YML041C YOR059CQ08448 450 aaKnown RBP5.57□□□□□ -1.52
VPS71YML041C MPH2P0CD99 609 aa5.56□□□□□ -1.52
VPS71YML041C TAT1P38085 619 aa5.56□□□□□ -1.52
VPS71YML041C CIT3P43635 486 aa5.56□□□□□ -1.52
VPS71YML041C REH1Q06709 432 aa5.56□□□□□ -1.52
VPS71YML041C GIN4Q12263 1142 aa5.56□□□□□ -1.52
VPS71YML041C HMG1P12683 1054 aa5.55□□□□□ -1.52
VPS71YML041C CKB2P38930 258 aa5.55□□□□□ -1.52
VPS71YML041C RCM1P53972 490 aa5.55□□□□□ -1.52
VPS71YML041C SDH1Q00711 640 aa5.55□□□□□ -1.52
VPS71YML041C YDR338CQ05497 695 aa5.55□□□□□ -1.52
VPS71YML041C FAP7Q12055 197 aaPredicted RBP5.55□□□□□ -1.52
VPS71YML041C SVS1Q12254 260 aa5.55□□□□□ -1.52
VPS71YML041C PER1P25625 357 aa5.54□□□□□ -1.52
VPS71YML041C DUG1P43616 481 aaKnown RBP5.54□□□□□ -1.52
VPS71YML041C NIT3P49954 291 aa5.54□□□□□ -1.52
VPS71YML041C AIM14P53109 570 aa5.54□□□□□ -1.52
VPS71YML041C GUD1Q07729 489 aa5.54□□□□□ -1.52
VPS71YML041C YOR378WQ08902 515 aa5.54□□□□□ -1.52
VPS71YML041C TRE1Q08919 783 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 40.9 ms