RNA–Protein interactions for RNA: YML029W

USA1, Transcript of Scaffold subunit of the Hrd1p ubiquitin ligase, yeastyeast

Gene USA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USA1YML029W RSC1P53236 928 aa4.29□□□□□ -1.72
USA1YML029W SKY1Q03656 742 aa4.29□□□□□ -1.72
USA1YML029W COG4Q06096 861 aa4.29□□□□□ -1.72
USA1YML029W OXR1Q08952 273 aa4.29□□□□□ -1.72
USA1YML029W PHO8P11491 566 aa4.28□□□□□ -1.72
USA1YML029W YGL015CP33199 130 aa4.28□□□□□ -1.72
USA1YML029W SHP1P34223 423 aa4.28□□□□□ -1.72
USA1YML029W CTM1P38818 585 aa4.28□□□□□ -1.72
USA1YML029W CSN12P47130 423 aa4.28□□□□□ -1.72
USA1YML029W PSP2P50109 593 aaKnown RBP4.28□□□□□ -1.72
USA1YML029W NCS2P53923 493 aaPredicted RBP4.28□□□□□ -1.72
USA1YML029W AIM33Q04516 312 aa4.28□□□□□ -1.72
USA1YML029W COQ9Q05779 260 aa4.28□□□□□ -1.72
USA1YML029W RLP24Q07915 199 aaKnown RBP4.28□□□□□ -1.72
USA1YML029W TCO89Q08921 799 aa4.28□□□□□ -1.72
USA1YML029W YEL076C-AP0CX16 216 aa4.28□□□□□ -1.72
USA1YML029W YLR464WP0CX17 216 aa4.28□□□□□ -1.72
USA1YML029W ISY1P21374 235 aaPredicted RBP4.28□□□□□ -1.72
USA1YML029W MSS51P32335 436 aa4.28□□□□□ -1.72
USA1YML029W BIO2P32451 375 aa4.28□□□□□ -1.72
USA1YML029W YSC83P32792 385 aa4.28□□□□□ -1.72
USA1YML029W SMY2P32909 740 aaKnown RBP4.28□□□□□ -1.72
USA1YML029W ATG19P35193 415 aa4.28□□□□□ -1.72
USA1YML029W YEL076CP39971 216 aa4.28□□□□□ -1.72
USA1YML029W RPN3P40016 523 aaKnown RBP4.28□□□□□ -1.72
USA1YML029W COS5P47187 383 aa4.28□□□□□ -1.72
USA1YML029W LCD1Q04377 747 aa4.28□□□□□ -1.72
USA1YML029W YLH47Q06493 454 aa4.28□□□□□ -1.72
USA1YML029W YPL277CQ08989 487 aa4.28□□□□□ -1.72
USA1YML029W OSW2Q12202 724 aa4.28□□□□□ -1.72
USA1YML029W MED1Q12321 566 aa4.28□□□□□ -1.72
USA1YML029W RKM4Q12504 494 aa4.28□□□□□ -1.72
USA1YML029W TUF1P02992 437 aaKnown RBP4.27□□□□□ -1.73
USA1YML029W DBP5P20449 482 aaKnown RBP4.27□□□□□ -1.73
USA1YML029W SPT5P27692 1063 aaKnown RBP4.27□□□□□ -1.73
USA1YML029W DUR3P33413 735 aa4.27□□□□□ -1.73
USA1YML029W YKL023WP36103 277 aaKnown RBP4.27□□□□□ -1.73
USA1YML029W UIP5P36137 443 aa4.27□□□□□ -1.73
USA1YML029W MSC7P38694 644 aa4.27□□□□□ -1.73
USA1YML029W RRM3P38766 723 aa4.27□□□□□ -1.73
USA1YML029W ORC6P38826 435 aa4.27□□□□□ -1.73
USA1YML029W FIR1P40020 876 aa4.27□□□□□ -1.73
USA1YML029W YFL034WP43564 1073 aa4.27□□□□□ -1.73
USA1YML029W BFA1P47113 574 aa4.27□□□□□ -1.73
USA1YML029W YGR273CP53329 174 aa4.27□□□□□ -1.73
USA1YML029W VMS1Q04311 632 aaKnown RBP4.27□□□□□ -1.73
USA1YML029W YML083CQ04526 418 aa4.27□□□□□ -1.73
USA1YML029W RIF1P29539 1916 aa4.27□□□□□ -1.73
USA1YML029W GSY2P27472 705 aa4.27□□□□□ -1.73
USA1YML029W CAB3P36076 571 aa4.27□□□□□ -1.73
USA1YML029W GRS1P38088 690 aaKnown RBP4.27□□□□□ -1.73
USA1YML029W UBP14P38237 781 aaKnown RBP4.27□□□□□ -1.73
USA1YML029W EFM2P38347 419 aa4.27□□□□□ -1.73
USA1YML029W BRE2P43132 505 aa4.27□□□□□ -1.73
USA1YML029W ENV11P53246 860 aa4.27□□□□□ -1.73
USA1YML029W DON1Q05610 365 aa4.27□□□□□ -1.73
USA1YML029W ATE1P16639 503 aa4.26□□□□□ -1.73
USA1YML029W CDC15P27636 974 aa4.26□□□□□ -1.73
USA1YML029W MRF1P30775 413 aaPredicted RBP4.26□□□□□ -1.73
USA1YML029W MAC1P35192 417 aa4.26□□□□□ -1.73
USA1YML029W FIG4P42837 879 aa4.26□□□□□ -1.73
USA1YML029W SPO74P45819 413 aa4.26□□□□□ -1.73
USA1YML029W PGA2P53903 129 aa4.26□□□□□ -1.73
USA1YML029W SVF1Q05515 481 aa4.26□□□□□ -1.73
USA1YML029W ADY4Q05955 493 aa4.26□□□□□ -1.73
USA1YML029W PSR2Q07949 397 aa4.26□□□□□ -1.73
USA1YML029W MAS2P11914 482 aa4.26□□□□□ -1.73
USA1YML029W POL3P15436 1097 aa4.26□□□□□ -1.73
USA1YML029W PFK1P16861 987 aaKnown RBP4.26□□□□□ -1.73
USA1YML029W ADE2P21264 571 aaKnown RBP4.26□□□□□ -1.73
USA1YML029W IRE1P32361 1115 aa4.26□□□□□ -1.73
USA1YML029W SAC6P32599 642 aaKnown RBP4.26□□□□□ -1.73
USA1YML029W SKG6P32900 734 aaPredicted RBP4.26□□□□□ -1.73
USA1YML029W CLA4P48562 842 aa4.26□□□□□ -1.73
USA1YML029W SDH5Q08230 162 aa4.26□□□□□ -1.73
USA1YML029W MOT1P32333 1867 aa4.25□□□□□ -1.73
USA1YML029W DED1P06634 604 aaKnown RBP4.25□□□□□ -1.73
USA1YML029W CDC3P32457 520 aaKnown RBP4.25□□□□□ -1.73
USA1YML029W SLD2P34252 453 aa4.25□□□□□ -1.73
USA1YML029W MNN4P36044 1178 aa4.25□□□□□ -1.73
USA1YML029W PET10P36139 283 aa4.25□□□□□ -1.73
USA1YML029W MRPL10P36520 322 aa4.25□□□□□ -1.73
USA1YML029W MRX3P38172 270 aa4.25□□□□□ -1.73
USA1YML029W AFG3P39925 761 aa4.25□□□□□ -1.73
USA1YML029W EAF5P39995 279 aa4.25□□□□□ -1.73
USA1YML029W NPP2P39997 493 aa4.25□□□□□ -1.73
USA1YML029W HUL4P40985 892 aa4.25□□□□□ -1.73
USA1YML029W RPS7BP48164 190 aaKnown RBP4.25□□□□□ -1.73
USA1YML029W YGL039WP53183 348 aaKnown RBP4.25□□□□□ -1.73
USA1YML029W CUL3P53202 744 aa4.25□□□□□ -1.73
USA1YML029W SSL2Q00578 843 aa4.25□□□□□ -1.73
USA1YML029W PLP2Q12017 286 aa4.25□□□□□ -1.73
USA1YML029W CDC53Q12018 815 aaKnown RBP4.25□□□□□ -1.73
USA1YML029W ATG11Q12527 1178 aa4.25□□□□□ -1.73
USA1YML029W SWI6P09959 803 aa4.25□□□□□ -1.73
USA1YML029W SUP45P12385 437 aaKnown RBP4.25□□□□□ -1.73
USA1YML029W NAT1P12945 854 aaKnown RBP4.25□□□□□ -1.73
USA1YML029W SPC110P32380 944 aa4.25□□□□□ -1.73
USA1YML029W TMT1P32643 299 aa4.25□□□□□ -1.73
USA1YML029W MPE1P35728 441 aaKnown RBP4.25□□□□□ -1.73
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms