RNA–Protein interactions for RNA: YLR336C

SGD1, Transcript of Essential nuclear protein, yeastyeast

Gene SGD1, Length 2,700 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGD1YLR336C GYP7P48365 746 aa2.91□□□□□ -1.94
SGD1YLR336C SRM1P21827 482 aa2.91□□□□□ -1.94
SGD1YLR336C MSH2P25847 964 aa2.91□□□□□ -1.94
SGD1YLR336C HSP78P33416 811 aa2.91□□□□□ -1.94
SGD1YLR336C MEF1P25039 761 aa2.9□□□□□ -1.95
SGD1YLR336C REC104P33323 182 aa2.9□□□□□ -1.95
SGD1YLR336C YAP1801P38856 637 aa2.9□□□□□ -1.95
SGD1YLR336C YER158CP40095 573 aa2.9□□□□□ -1.95
SGD1YLR336C GYP8P43570 497 aa2.9□□□□□ -1.95
SGD1YLR336C YKE2P52553 114 aa2.9□□□□□ -1.95
SGD1YLR336C ORC3P54790 616 aa2.9□□□□□ -1.95
SGD1YLR336C BRE4Q07660 1125 aa2.9□□□□□ -1.95
SGD1YLR336C NTG2Q08214 380 aa2.9□□□□□ -1.95
SGD1YLR336C PHR1P05066 565 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
SGD1YLR336C APL1P27351 700 aa2.9□□□□□ -1.95
SGD1YLR336C FUN30P31380 1131 aa2.9□□□□□ -1.95
SGD1YLR336C PUB1P32588 453 aaKnown RBP RIP-Chip data2.9□□□□□ -1.95not detected
SGD1YLR336C INP52P50942 1183 aa2.9□□□□□ -1.95
SGD1YLR336C OSW2Q12202 724 aa2.9□□□□□ -1.95
SGD1YLR336C CDC48P25694 835 aaKnown RBP2.89□□□□□ -1.95
SGD1YLR336C ECM21P38167 1117 aaKnown RBP2.89□□□□□ -1.95
SGD1YLR336C ETP1P38748 585 aaKnown RBP2.89□□□□□ -1.95
SGD1YLR336C ALG2P43636 503 aa2.89□□□□□ -1.95
SGD1YLR336C TY4A-JP47023 414 aa2.89□□□□□ -1.95
SGD1YLR336C MSC2Q03455 724 aa2.89□□□□□ -1.95
SGD1YLR336C ENV7Q12003 364 aa2.89□□□□□ -1.95
SGD1YLR336C YKR078WP36158 585 aaKnown RBP2.89□□□□□ -1.95
SGD1YLR336C CCM1P48237 864 aaPredicted RBP2.89□□□□□ -1.95
SGD1YLR336C DNM1P54861 757 aa2.89□□□□□ -1.95
SGD1YLR336C YDL177CQ12257 170 aa2.89□□□□□ -1.95
SGD1YLR336C MDM12Q92328 271 aa2.89□□□□□ -1.95
SGD1YLR336C CYC1P00044 109 aaPredicted RBP2.88□□□□□ -1.95
SGD1YLR336C RAD53P22216 821 aa2.88□□□□□ -1.95
SGD1YLR336C LIP5P32875 414 aa2.88□□□□□ -1.95
SGD1YLR336C OMA1P36163 345 aa2.88□□□□□ -1.95
SGD1YLR336C YBR238CP38330 731 aaKnown RBP2.88□□□□□ -1.95
SGD1YLR336C YJR142WP47173 342 aa2.88□□□□□ -1.95
SGD1YLR336C YGR283CP53336 341 aaPredicted RBP2.88□□□□□ -1.95
SGD1YLR336C POB3Q04636 552 aaKnown RBP2.88□□□□□ -1.95
SGD1YLR336C YPR196WQ06595 470 aa2.88□□□□□ -1.95
SGD1YLR336C CMP2P14747 604 aa2.88□□□□□ -1.95
SGD1YLR336C SPC29P33419 253 aa2.88□□□□□ -1.95
SGD1YLR336C UGO1Q03327 502 aa2.88□□□□□ -1.95
SGD1YLR336C RSM24Q03976 319 aa2.88□□□□□ -1.95
SGD1YLR336C SIZ1Q04195 904 aa2.88□□□□□ -1.95
SGD1YLR336C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.88□□□□□ -1.95not detected
SGD1YLR336C PEX6P33760 1030 aa2.87□□□□□ -1.95
SGD1YLR336C LRG1P35688 1017 aa2.87□□□□□ -1.95
SGD1YLR336C NOP14Q99207 810 aaKnown RBP2.87□□□□□ -1.95
SGD1YLR336C KIN2P13186 1147 aaKnown RBP2.87□□□□□ -1.95
SGD1YLR336C RPL8AP17076 256 aaKnown RBP2.87□□□□□ -1.95
SGD1YLR336C VBA3P25594 458 aa2.87□□□□□ -1.95
SGD1YLR336C FPR3P38911 411 aaKnown RBP2.87□□□□□ -1.95
SGD1YLR336C FOL2P51601 243 aaKnown RBP2.87□□□□□ -1.95
SGD1YLR336C PLB2Q03674 706 aa2.87□□□□□ -1.95
SGD1YLR336C GAL10P04397 699 aa2.86□□□□□ -1.95
SGD1YLR336C CDC9P04819 755 aa2.86□□□□□ -1.95
SGD1YLR336C SRP101P32916 621 aa2.86□□□□□ -1.95
SGD1YLR336C EMC3P36039 253 aa2.86□□□□□ -1.95
SGD1YLR336C DSS1P39112 969 aa2.86□□□□□ -1.95
SGD1YLR336C CDA1Q06702 301 aa2.86□□□□□ -1.95
SGD1YLR336C NOT3P06102 836 aaKnown RBP2.86□□□□□ -1.95
SGD1YLR336C RPD3P32561 433 aa2.86□□□□□ -1.95
SGD1YLR336C POL12P38121 705 aaPredicted RBP2.86□□□□□ -1.95
SGD1YLR336C TFB2Q02939 513 aa2.86□□□□□ -1.95
SGD1YLR336C MPH2P0CD99 609 aa2.85□□□□□ -1.95
SGD1YLR336C YCL002CP25565 263 aa2.85□□□□□ -1.95
SGD1YLR336C PER1P25625 357 aa2.85□□□□□ -1.95
SGD1YLR336C ZRG8P40021 1076 aa2.85□□□□□ -1.95
SGD1YLR336C YGR012WP53206 393 aa2.85□□□□□ -1.95
SGD1YLR336C HDA1P53973 706 aa2.85□□□□□ -1.95
SGD1YLR336C ATP25Q03153 612 aa2.85□□□□□ -1.95
SGD1YLR336C ROT1Q03691 256 aa2.85□□□□□ -1.95
SGD1YLR336C SSL1Q04673 461 aaPredicted RBP2.85□□□□□ -1.95
SGD1YLR336C RSC3Q06639 885 aa2.85□□□□□ -1.95
SGD1YLR336C MET7Q08645 548 aa2.85□□□□□ -1.95
SGD1YLR336C DFG16Q99234 619 aa2.85□□□□□ -1.95
SGD1YLR336C ADR1P07248 1323 aa2.85□□□□□ -1.95
SGD1YLR336C ENA1P13587 1091 aa2.85□□□□□ -1.95
SGD1YLR336C RPC82P32349 654 aa2.85□□□□□ -1.95
SGD1YLR336C STE13P33894 931 aa2.85□□□□□ -1.95
SGD1YLR336C MTC2P34246 357 aa2.85□□□□□ -1.95
SGD1YLR336C CEP3P40969 608 aa2.85□□□□□ -1.95
SGD1YLR336C GCV2P49095 1034 aa2.85□□□□□ -1.95
SGD1YLR336C ZDS1P50111 915 aaKnown RBP2.85□□□□□ -1.95
SGD1YLR336C TAD1P53065 400 aa2.85□□□□□ -1.95
SGD1YLR336C DAM1P53267 343 aa2.85□□□□□ -1.95
SGD1YLR336C ENA2Q01896 1091 aa2.85□□□□□ -1.95
SGD1YLR336C LRS4Q04087 347 aaKnown RBP2.85□□□□□ -1.95
SGD1YLR336C ENA5Q12691 1091 aa2.85□□□□□ -1.95
SGD1YLR336C YGR161W-CQ3E744 92 aa2.85□□□□□ -1.95
SGD1YLR336C DAL7P21826 554 aa2.84□□□□□ -1.95
SGD1YLR336C MND2P40577 368 aa2.84□□□□□ -1.95
SGD1YLR336C NIT3P49954 291 aa2.84□□□□□ -1.95
SGD1YLR336C RAI1P53063 387 aaKnown RBP2.84□□□□□ -1.95
SGD1YLR336C UTP14Q04500 899 aaKnown RBP2.84□□□□□ -1.95
SGD1YLR336C YLR001CQ07895 862 aa2.84□□□□□ -1.95
SGD1YLR336C SRD1P09007 221 aa2.84□□□□□ -1.95
SGD1YLR336C RFA1P22336 621 aaKnown RBP2.84□□□□□ -1.95
SGD1YLR336C URA1P28272 314 aaPredicted RBP2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms