RNA–Protein interactions for RNA: YLR224W

YLR224W, Transcript of F-box protein and component of SCF ubiquitin ligase complexes, yeast

Gene YLR224W, Length 1,110 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YLR224W	YLR224W	TRM2	P33753	639 aa		4.24	□□□□□ -1.73
YLR224W	YLR224W	YBR184W	P38299	523 aa		4.24	□□□□□ -1.73
YLR224W	YLR224W	CHA4	P43634	648 aa		4.24	□□□□□ -1.73
YLR224W	YLR224W	MET12	P46151	657 aa		4.24	□□□□□ -1.73
YLR224W	YLR224W	NNF1	P47149	201 aa		4.24	□□□□□ -1.73
YLR224W	YLR224W	DUS3	Q06053	668 aa	Known RBP	4.24	□□□□□ -1.73
YLR224W	YLR224W	CDA1	Q06702	301 aa		4.24	□□□□□ -1.73
YLR224W	YLR224W	OSW2	Q12202	724 aa		4.24	□□□□□ -1.73
YLR224W	YLR224W	PNS1	Q12412	539 aa		4.24	□□□□□ -1.73
YLR224W	YLR224W	LAS17	Q12446	633 aa		4.24	□□□□□ -1.73
YLR224W	YLR224W	THS1	P04801	734 aa	Known RBP	4.23	□□□□□ -1.73
YLR224W	YLR224W	SRP101	P32916	621 aa		4.23	□□□□□ -1.73
YLR224W	YLR224W	ECM21	P38167	1117 aa	Known RBP	4.23	□□□□□ -1.73
YLR224W	YLR224W	PBY1	P38254	753 aa		4.23	□□□□□ -1.73
YLR224W	YLR224W	SAH1	P39954	449 aa	Known RBP	4.23	□□□□□ -1.73
YLR224W	YLR224W	PFD1	P46988	109 aa		4.23	□□□□□ -1.73
YLR224W	YLR224W	YDR306C	Q06640	478 aa		4.23	□□□□□ -1.73
YLR224W	YLR224W	HIS5	P07172	385 aa		4.22	□□□□□ -1.73
YLR224W	YLR224W	NPP1	P25353	742 aa		4.22	□□□□□ -1.73
YLR224W	YLR224W	DCG1	P32460	244 aa		4.22	□□□□□ -1.73
YLR224W	YLR224W	CDC12	P32468	407 aa	Known RBP	4.22	□□□□□ -1.73
YLR224W	YLR224W	POA1	P38218	177 aa		4.22	□□□□□ -1.73
YLR224W	YLR224W	IRR1	P40541	1150 aa		4.22	□□□□□ -1.73
YLR224W	YLR224W	KIN4	Q01919	800 aa		4.22	□□□□□ -1.73
YLR224W	YLR224W	SRT1	Q03175	343 aa		4.22	□□□□□ -1.73
YLR224W	YLR224W	UBX5	Q06682	500 aa		4.22	□□□□□ -1.73
YLR224W	YLR224W	KCS1	Q12494	1050 aa		4.22	□□□□□ -1.73
YLR224W	YLR224W	RAD4	P14736	754 aa		4.21	□□□□□ -1.74
YLR224W	YLR224W	PRP9	P19736	530 aa	Known RBP	4.21	□□□□□ -1.74
YLR224W	YLR224W	STE11	P23561	717 aa		4.21	□□□□□ -1.74
YLR224W	YLR224W	AFR1	P33304	620 aa		4.21	□□□□□ -1.74
YLR224W	YLR224W	MSS4	P38994	779 aa		4.21	□□□□□ -1.74
YLR224W	YLR224W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
YLR224W	YLR224W	MSE1	P48525	536 aa		4.21	□□□□□ -1.74
YLR224W	YLR224W	NOP12	Q08208	459 aa	Known RBP	4.21	□□□□□ -1.74
YLR224W	YLR224W	HBS1	P32769	611 aa	Known RBP	4.2	□□□□□ -1.74
YLR224W	YLR224W	DEF1	P35732	738 aa	Known RBP	4.2	□□□□□ -1.74
YLR224W	YLR224W	EXG2	P52911	562 aa		4.2	□□□□□ -1.74
YLR224W	YLR224W	YGR012W	P53206	393 aa		4.2	□□□□□ -1.74
YLR224W	YLR224W	TPO2	P53283	614 aa		4.2	□□□□□ -1.74
YLR224W	YLR224W	SPO75	Q07798	868 aa		4.2	□□□□□ -1.74
YLR224W	YLR224W	FMP25	Q08023	583 aa		4.2	□□□□□ -1.74
YLR224W	YLR224W	YLL058W	Q12198	575 aa		4.2	□□□□□ -1.74
YLR224W	YLR224W	SCT1	P32784	759 aa		4.19	□□□□□ -1.74
YLR224W	YLR224W	YBR284W	P38150	797 aa		4.19	□□□□□ -1.74
YLR224W	YLR224W	OCA5	P38738	679 aa		4.19	□□□□□ -1.74
YLR224W	YLR224W	CHS7	P38843	316 aa		4.19	□□□□□ -1.74
YLR224W	YLR224W	TIM54	P47045	478 aa		4.19	□□□□□ -1.74
YLR224W	YLR224W	SRP1	Q02821	542 aa	Known RBP	4.19	□□□□□ -1.74
YLR224W	YLR224W	SPE1	P08432	466 aa		4.18	□□□□□ -1.74
YLR224W	YLR224W	PPH3	P32345	308 aa		4.18	□□□□□ -1.74
YLR224W	YLR224W	ALR2	P43553	858 aa		4.18	□□□□□ -1.74
YLR224W	YLR224W	ERP6	P53198	216 aa		4.18	□□□□□ -1.74
YLR224W	YLR224W	OSH2	Q12451	1283 aa		4.18	□□□□□ -1.74
YLR224W	YLR224W	YOL098C	Q12496	1037 aa		4.18	□□□□□ -1.74
YLR224W	YLR224W	RPL8B	P29453	256 aa	Known RBP	4.17	□□□□□ -1.74
YLR224W	YLR224W	FUN30	P31380	1131 aa		4.17	□□□□□ -1.74
YLR224W	YLR224W	AAR2	P32357	355 aa	Predicted RBP	4.17	□□□□□ -1.74
YLR224W	YLR224W	TSL1	P38427	1098 aa	Known RBP	4.17	□□□□□ -1.74
YLR224W	YLR224W	AIM21	P40563	679 aa		4.17	□□□□□ -1.74
YLR224W	YLR224W	NCS6	P53088	359 aa		4.17	□□□□□ -1.74
YLR224W	YLR224W	SLU7	Q02775	382 aa	Known RBP	4.17	□□□□□ -1.74
YLR224W	YLR224W	BDF2	Q07442	638 aa		4.17	□□□□□ -1.74
YLR224W	YLR224W	TOP3	P13099	656 aa		4.16	□□□□□ -1.74
YLR224W	YLR224W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
YLR224W	YLR224W	HSP60	P19882	572 aa	Known RBP	4.16	□□□□□ -1.74
YLR224W	YLR224W	PMI40	P29952	429 aa	Known RBP	4.16	□□□□□ -1.74
YLR224W	YLR224W	YRO2	P38079	344 aa		4.16	□□□□□ -1.74
YLR224W	YLR224W	CCC2	P38995	1004 aa		4.16	□□□□□ -1.74
YLR224W	YLR224W	SIT1	P39980	628 aa		4.16	□□□□□ -1.74
YLR224W	YLR224W	IOC3	P43596	787 aa		4.16	□□□□□ -1.74
YLR224W	YLR224W	BUL1	P48524	976 aa		4.16	□□□□□ -1.74
YLR224W	YLR224W	UTP8	P53276	713 aa	Known RBP	4.16	□□□□□ -1.74
YLR224W	YLR224W	NSE3	Q05541	303 aa		4.16	□□□□□ -1.74
YLR224W	YLR224W	EAF1	Q06337	982 aa		4.16	□□□□□ -1.74
YLR224W	YLR224W	CDC53	Q12018	815 aa	Known RBP	4.16	□□□□□ -1.74
YLR224W	YLR224W	YPR071W	Q12346	211 aa		4.16	□□□□□ -1.74
YLR224W	YLR224W	KAR4	P25583	335 aa		4.15	□□□□□ -1.75
YLR224W	YLR224W	ARE1	P25628	610 aa		4.15	□□□□□ -1.75
YLR224W	YLR224W	HRR25	P29295	494 aa	Known RBP	4.15	□□□□□ -1.75
YLR224W	YLR224W	STE14	P32584	239 aa		4.15	□□□□□ -1.75
YLR224W	YLR224W	YHR020W	P38708	688 aa	Known RBP	4.15	□□□□□ -1.75
YLR224W	YLR224W	YER158C	P40095	573 aa		4.15	□□□□□ -1.75
YLR224W	YLR224W	HUL5	P53119	910 aa		4.15	□□□□□ -1.75
YLR224W	YLR224W	YGR125W	P53273	1036 aa		4.15	□□□□□ -1.75
YLR224W	YLR224W	CTF4	Q01454	927 aa		4.15	□□□□□ -1.75
YLR224W	YLR224W	BUL2	Q03758	920 aa	Known RBP	4.15	□□□□□ -1.75
YLR224W	YLR224W	TRM13	Q12383	476 aa		4.15	□□□□□ -1.75
YLR224W	YLR224W	NPC2	Q12408	173 aa		4.15	□□□□□ -1.75
YLR224W	YLR224W	HSF1	P10961	833 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	MSD1	P15179	658 aa	Known RBP	4.14	□□□□□ -1.75
YLR224W	YLR224W	CDC11	P32458	415 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	SRP40	P32583	406 aa	Predicted RBP	4.14	□□□□□ -1.75
YLR224W	YLR224W	TOK1	P40310	691 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	URM1	P40554	99 aa	Predicted RBP	4.14	□□□□□ -1.75
YLR224W	YLR224W	GYP7	P48365	746 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	SSL1	Q04673	461 aa	Predicted RBP	4.14	□□□□□ -1.75
YLR224W	YLR224W	YPR196W	Q06595	470 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	FLC1	Q08967	793 aa		4.14	□□□□□ -1.75
YLR224W	YLR224W	UPC2	Q12151	913 aa		4.14	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 17.8 ms