RNA–Protein interactions for RNA: YLR132C

USB1, Transcript of Putative phosphodiesterase specific for U6 snRNA 3' end modification, yeastyeast

Gene USB1, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USB1YLR132C GTF1P53260 183 aaPredicted RBP5.64□□□□□ -1.51
USB1YLR132C VPS62P53285 467 aa5.64□□□□□ -1.51
USB1YLR132C PBP1P53297 722 aaKnown RBP5.64□□□□□ -1.51
USB1YLR132C LST4P34239 828 aa5.63□□□□□ -1.51
USB1YLR132C IOC3P43596 787 aa5.63□□□□□ -1.51
USB1YLR132C GCV2P49095 1034 aa5.63□□□□□ -1.51
USB1YLR132C HUL5P53119 910 aa5.63□□□□□ -1.51
USB1YLR132C ERP6P53198 216 aa5.63□□□□□ -1.51
USB1YLR132C YAP6Q03935 383 aa5.63□□□□□ -1.51
USB1YLR132C BDF2Q07442 638 aa5.63□□□□□ -1.51
USB1YLR132C THS1P04801 734 aaKnown RBP5.62□□□□□ -1.51
USB1YLR132C HSP60P19882 572 aaKnown RBP5.62□□□□□ -1.51
USB1YLR132C MTC3P53077 123 aa5.62□□□□□ -1.51
USB1YLR132C YGR125WP53273 1036 aa5.62□□□□□ -1.51
USB1YLR132C RPN4Q03465 531 aa5.62□□□□□ -1.51
USB1YLR132C EAF1Q06337 982 aa5.62□□□□□ -1.51
USB1YLR132C ESC2Q06340 456 aa5.62□□□□□ -1.51
USB1YLR132C XYL2Q07993 356 aa5.62□□□□□ -1.51
USB1YLR132C HMI1Q12039 706 aa5.62□□□□□ -1.51
USB1YLR132C EMC1P25574 760 aa5.61□□□□□ -1.51
USB1YLR132C ARE1P25628 610 aa5.61□□□□□ -1.51
USB1YLR132C GGA2P38817 585 aaKnown RBP5.61□□□□□ -1.51
USB1YLR132C YCF1P39109 1515 aaKnown RBP5.61□□□□□ -1.51
USB1YLR132C CHZ1P40019 153 aaPredicted RBP5.61□□□□□ -1.51
USB1YLR132C HUL4P40985 892 aa5.61□□□□□ -1.51
USB1YLR132C SSK2P53599 1579 aa5.61□□□□□ -1.51
USB1YLR132C TMA10Q06177 86 aa5.61□□□□□ -1.51
USB1YLR132C CDC11P32458 415 aa5.6□□□□□ -1.51
USB1YLR132C PPG1P32838 368 aa5.6□□□□□ -1.51
USB1YLR132C MND2P40577 368 aa5.6□□□□□ -1.51
USB1YLR132C GSF2Q04697 403 aaKnown RBP5.6□□□□□ -1.51
USB1YLR132C FMP25Q08023 583 aa5.6□□□□□ -1.51
USB1YLR132C FLC1Q08967 793 aa5.6□□□□□ -1.51
USB1YLR132C TUB2P02557 457 aaKnown RBP5.59□□□□□ -1.51
USB1YLR132C GAL11P19659 1081 aa5.59□□□□□ -1.51
USB1YLR132C STE11P23561 717 aa5.59□□□□□ -1.51
USB1YLR132C RPL8BP29453 256 aaKnown RBP5.59□□□□□ -1.51
USB1YLR132C STE5P32917 917 aa5.59□□□□□ -1.51
USB1YLR132C YKL151CP36059 337 aa5.59□□□□□ -1.51
USB1YLR132C NMD2P38798 1089 aaKnown RBP5.59□□□□□ -1.51
USB1YLR132C MBP1P39678 833 aa5.59□□□□□ -1.51
USB1YLR132C HRQ1Q05549 1077 aa5.59□□□□□ -1.51
USB1YLR132C YLR224WQ05947 369 aa5.59□□□□□ -1.51
USB1YLR132C ALR2P43553 858 aa5.58□□□□□ -1.52
USB1YLR132C MNN10P50108 393 aaKnown RBP5.58□□□□□ -1.52
USB1YLR132C MCM6P53091 1017 aaKnown RBP5.58□□□□□ -1.52
USB1YLR132C UTP8P53276 713 aaKnown RBP5.58□□□□□ -1.52
USB1YLR132C SRP1Q02821 542 aaKnown RBP5.58□□□□□ -1.52
USB1YLR132C TPO1Q07824 586 aa5.58□□□□□ -1.52
USB1YLR132C CIT1P00890 479 aa5.57□□□□□ -1.52
USB1YLR132C PPH3P32345 308 aa5.57□□□□□ -1.52
USB1YLR132C PBP2P38151 413 aaKnown RBP RIP-Chip data5.57□□□□□ -1.52not detected
USB1YLR132C YAP1801P38856 637 aa5.57□□□□□ -1.52
USB1YLR132C ZRG8P40021 1076 aa5.57□□□□□ -1.52
USB1YLR132C RNH70P53331 553 aa5.57□□□□□ -1.52
USB1YLR132C YDR306CQ06640 478 aa5.57□□□□□ -1.52
USB1YLR132C YDL124WQ07551 312 aaKnown RBP5.57□□□□□ -1.52
USB1YLR132C ADY3Q07732 790 aa5.57□□□□□ -1.52
USB1YLR132C NOP12Q08208 459 aaKnown RBP5.57□□□□□ -1.52
USB1YLR132C HCM1P25364 564 aa5.56□□□□□ -1.52
USB1YLR132C AAR2P32357 355 aaPredicted RBP5.56□□□□□ -1.52
USB1YLR132C RSP5P39940 809 aaKnown RBP5.56□□□□□ -1.52
USB1YLR132C MDM38Q08179 573 aa5.56□□□□□ -1.52
USB1YLR132C OSW2Q12202 724 aa5.56□□□□□ -1.52
USB1YLR132C ADE8P04161 214 aa5.55□□□□□ -1.52
USB1YLR132C ENA1P13587 1091 aa5.55□□□□□ -1.52
USB1YLR132C CCC2P38995 1004 aa5.55□□□□□ -1.52
USB1YLR132C ENA2Q01896 1091 aa5.55□□□□□ -1.52
USB1YLR132C DUS3Q06053 668 aaKnown RBP5.55□□□□□ -1.52
USB1YLR132C YLL058WQ12198 575 aa5.55□□□□□ -1.52
USB1YLR132C ENA5Q12691 1091 aa5.55□□□□□ -1.52
USB1YLR132C CIT2P08679 460 aa5.54□□□□□ -1.52
USB1YLR132C TRM2P33753 639 aa5.54□□□□□ -1.52
USB1YLR132C POA1P38218 177 aa5.54□□□□□ -1.52
USB1YLR132C YHR020WP38708 688 aaKnown RBP5.54□□□□□ -1.52
USB1YLR132C GIC1P38785 314 aa5.54□□□□□ -1.52
USB1YLR132C MET12P46151 657 aa5.54□□□□□ -1.52
USB1YLR132C PFD1P46988 109 aa5.54□□□□□ -1.52
USB1YLR132C UBX5Q06682 500 aa5.54□□□□□ -1.52
USB1YLR132C YLR125WQ12138 136 aa5.54□□□□□ -1.52
USB1YLR132C NTO1Q12311 748 aa5.54□□□□□ -1.52
USB1YLR132C PLB1P39105 664 aa5.53□□□□□ -1.52
USB1YLR132C SAH1P39954 449 aaKnown RBP5.53□□□□□ -1.52
USB1YLR132C NUP82P40368 713 aa5.53□□□□□ -1.52
USB1YLR132C BUD6P41697 788 aa5.53□□□□□ -1.52
USB1YLR132C PHO23P50947 330 aa5.53□□□□□ -1.52
USB1YLR132C SRT1Q03175 343 aa5.53□□□□□ -1.52
USB1YLR132C CDA1Q06702 301 aa5.53□□□□□ -1.52
USB1YLR132C SIN3P22579 1536 aa5.53□□□□□ -1.52
USB1YLR132C CAN1P04817 590 aa5.52□□□□□ -1.53
USB1YLR132C MET6P05694 767 aaKnown RBP5.52□□□□□ -1.53
USB1YLR132C HIS5P07172 385 aa5.52□□□□□ -1.53
USB1YLR132C RRP14P36080 434 aaKnown RBP5.52□□□□□ -1.53
USB1YLR132C ECM21P38167 1117 aaKnown RBP5.52□□□□□ -1.53
USB1YLR132C NPP2P39997 493 aa5.52□□□□□ -1.53
USB1YLR132C PUS9Q12069 462 aa5.52□□□□□ -1.53
USB1YLR132C PNS1Q12412 539 aa5.52□□□□□ -1.53
USB1YLR132C SKI3P17883 1432 aaKnown RBP5.51□□□□□ -1.53
USB1YLR132C PMA1P05030 918 aaKnown RBP5.51□□□□□ -1.53
USB1YLR132C PHO8P11491 566 aa5.51□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 56.6 ms