RNA–Protein interactions for RNA: YLR040C

AFB1, Transcript of MATalpha-specific a-factor blocker, yeastyeast

Gene AFB1, Length 675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AFB1YLR040C VPS62P53285 467 aa4.17□□□□□ -1.74
AFB1YLR040C PBP1P53297 722 aaKnown RBP4.17□□□□□ -1.74
AFB1YLR040C EAF1Q06337 982 aa4.17□□□□□ -1.74
AFB1YLR040C CDA1Q06702 301 aa4.17□□□□□ -1.74
AFB1YLR040C SPO75Q07798 868 aa4.17□□□□□ -1.74
AFB1YLR040C HMI1Q12039 706 aa4.17□□□□□ -1.74
AFB1YLR040C SRP101P32916 621 aa4.16□□□□□ -1.74
AFB1YLR040C DOM34P33309 386 aa4.16□□□□□ -1.74
AFB1YLR040C SIT1P39980 628 aa4.16□□□□□ -1.74
AFB1YLR040C HUL5P53119 910 aa4.16□□□□□ -1.74
AFB1YLR040C ADY3Q07732 790 aa4.16□□□□□ -1.74
AFB1YLR040C YPR071WQ12346 211 aa4.16□□□□□ -1.74
AFB1YLR040C HBN1Q96VH4 193 aa4.16□□□□□ -1.74
AFB1YLR040C YLR358CO13565 187 aa4.15□□□□□ -1.75
AFB1YLR040C ARE1P25628 610 aa4.15□□□□□ -1.75
AFB1YLR040C LST4P34239 828 aa4.15□□□□□ -1.75
AFB1YLR040C POA1P38218 177 aa4.15□□□□□ -1.75
AFB1YLR040C YHR020WP38708 688 aaKnown RBP4.15□□□□□ -1.75
AFB1YLR040C YER158CP40095 573 aa4.15□□□□□ -1.75
AFB1YLR040C TIM54P47045 478 aa4.15□□□□□ -1.75
AFB1YLR040C YKE2P52553 114 aa4.15□□□□□ -1.75
AFB1YLR040C CLU1Q03690 1277 aaKnown RBP4.15□□□□□ -1.75
AFB1YLR040C BUL2Q03758 920 aaKnown RBP4.15□□□□□ -1.75
AFB1YLR040C YAP6Q03935 383 aa4.15□□□□□ -1.75
AFB1YLR040C CIT1P00890 479 aa4.14□□□□□ -1.75
AFB1YLR040C TOP3P13099 656 aa4.14□□□□□ -1.75
AFB1YLR040C PRP9P19736 530 aaKnown RBP4.14□□□□□ -1.75
AFB1YLR040C YCR015CP25616 317 aa4.14□□□□□ -1.75
AFB1YLR040C CCC2P38995 1004 aa4.14□□□□□ -1.75
AFB1YLR040C PLB1P39105 664 aa4.14□□□□□ -1.75
AFB1YLR040C TOK1P40310 691 aa4.14□□□□□ -1.75
AFB1YLR040C IOC3P43596 787 aa4.14□□□□□ -1.75
AFB1YLR040C CHA4P43634 648 aa4.14□□□□□ -1.75
AFB1YLR040C MET12P46151 657 aa4.14□□□□□ -1.75
AFB1YLR040C NNF1P47149 201 aa4.14□□□□□ -1.75
AFB1YLR040C ERP6P53198 216 aa4.14□□□□□ -1.75
AFB1YLR040C YGR125WP53273 1036 aa4.14□□□□□ -1.75
AFB1YLR040C YLR224WQ05947 369 aa4.14□□□□□ -1.75
AFB1YLR040C YPR196WQ06595 470 aa4.14□□□□□ -1.75
AFB1YLR040C WHI4Q07655 649 aaKnown RBP4.14□□□□□ -1.75
AFB1YLR040C OSH2Q12451 1283 aa4.14□□□□□ -1.75
AFB1YLR040C HIS5P07172 385 aa4.13□□□□□ -1.75
AFB1YLR040C HSF1P10961 833 aa4.13□□□□□ -1.75
AFB1YLR040C CDC48P25694 835 aaKnown RBP4.13□□□□□ -1.75
AFB1YLR040C YKR078WP36158 585 aaKnown RBP4.13□□□□□ -1.75
AFB1YLR040C GIP4P39732 760 aa4.13□□□□□ -1.75
AFB1YLR040C RSP5P39940 809 aaKnown RBP4.13□□□□□ -1.75
AFB1YLR040C YJL049WP47048 450 aa4.13□□□□□ -1.75
AFB1YLR040C LCD1Q04377 747 aa4.13□□□□□ -1.75
AFB1YLR040C BDF2Q07442 638 aa4.13□□□□□ -1.75
AFB1YLR040C FLC1Q08967 793 aa4.13□□□□□ -1.75
AFB1YLR040C SPE1P08432 466 aa4.12□□□□□ -1.75
AFB1YLR040C MSD1P15179 658 aaKnown RBP4.12□□□□□ -1.75
AFB1YLR040C HSP60P19882 572 aaKnown RBP4.12□□□□□ -1.75
AFB1YLR040C CDC11P32458 415 aa4.12□□□□□ -1.75
AFB1YLR040C SHM2P37291 469 aaKnown RBP4.12□□□□□ -1.75
AFB1YLR040C YBR238CP38330 731 aaKnown RBP4.12□□□□□ -1.75
AFB1YLR040C MPT5P39016 859 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75not detected
AFB1YLR040C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.12□□□□□ -1.75 RIP-Chip
AFB1YLR040C NSE3Q05541 303 aa4.12□□□□□ -1.75
AFB1YLR040C NOT3P06102 836 aaKnown RBP4.11□□□□□ -1.75
AFB1YLR040C RPC82P32349 654 aa4.11□□□□□ -1.75
AFB1YLR040C REC104P33323 182 aa4.11□□□□□ -1.75
AFB1YLR040C PET10P36139 283 aa4.11□□□□□ -1.75
AFB1YLR040C BET3P36149 193 aa4.11□□□□□ -1.75
AFB1YLR040C OCA5P38738 679 aa4.11□□□□□ -1.75
AFB1YLR040C TPO2P53283 614 aa4.11□□□□□ -1.75
AFB1YLR040C TAF8Q03750 510 aa4.11□□□□□ -1.75
AFB1YLR040C SSL1Q04673 461 aaPredicted RBP4.11□□□□□ -1.75
AFB1YLR040C TMA10Q06177 86 aa4.11□□□□□ -1.75
AFB1YLR040C NOP12Q08208 459 aaKnown RBP4.11□□□□□ -1.75
AFB1YLR040C YOL098CQ12496 1037 aa4.11□□□□□ -1.75
AFB1YLR040C STI1P15705 589 aaKnown RBP RIP-Chip data4.1□□□□□ -1.75not detected
AFB1YLR040C CTS1P29029 562 aa4.1□□□□□ -1.75
AFB1YLR040C YKL222CP35995 705 aa4.1□□□□□ -1.75
AFB1YLR040C URM1P40554 99 aaPredicted RBP4.1□□□□□ -1.75
AFB1YLR040C CCM1P48237 864 aaPredicted RBP4.1□□□□□ -1.75
AFB1YLR040C RTA1P53047 317 aa4.1□□□□□ -1.75
AFB1YLR040C RAI1P53063 387 aaKnown RBP4.1□□□□□ -1.75
AFB1YLR040C MCM6P53091 1017 aaKnown RBP4.1□□□□□ -1.75
AFB1YLR040C CDC53Q12018 815 aaKnown RBP4.1□□□□□ -1.75
AFB1YLR040C CAN1P04817 590 aa4.09□□□□□ -1.75
AFB1YLR040C RPD3P32561 433 aa4.09□□□□□ -1.75
AFB1YLR040C STE13P33894 931 aa4.09□□□□□ -1.75
AFB1YLR040C MNN10P50108 393 aaKnown RBP4.09□□□□□ -1.75
AFB1YLR040C PSP2P50109 593 aaKnown RBP4.09□□□□□ -1.75
AFB1YLR040C NCS6P53088 359 aa4.09□□□□□ -1.75
AFB1YLR040C KCS1Q12494 1050 aa4.09□□□□□ -1.75
AFB1YLR040C HUL4P40985 892 aa4.08□□□□□ -1.76
AFB1YLR040C UBP6P43593 499 aaKnown RBP4.08□□□□□ -1.76
AFB1YLR040C PHO23P50947 330 aa4.08□□□□□ -1.76
AFB1YLR040C HDA1P53973 706 aa4.08□□□□□ -1.76
AFB1YLR040C YDL124WQ07551 312 aaKnown RBP4.08□□□□□ -1.76
AFB1YLR040C UPC2Q12151 913 aa4.08□□□□□ -1.76
AFB1YLR040C FBP1P09201 348 aa4.07□□□□□ -1.76
AFB1YLR040C SRP40P32583 406 aaPredicted RBP4.07□□□□□ -1.76
AFB1YLR040C STE14P32584 239 aa4.07□□□□□ -1.76
AFB1YLR040C CEP3P40969 608 aa4.07□□□□□ -1.76
AFB1YLR040C PPM2Q08282 695 aa4.07□□□□□ -1.76
AFB1YLR040C ENV7Q12003 364 aa4.07□□□□□ -1.76
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms