RNA–Protein interactions for RNA: YLL039C

UBI4, Transcript of Ubiquitin, yeast

Gene UBI4, Length 1,146 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBI4	YLL039C	KRS1	P15180	591 aa	Known RBP	5.2	□□□□□ -1.58
UBI4	YLL039C	CHS3	P29465	1165 aa		5.2	□□□□□ -1.58
UBI4	YLL039C	PRO3	P32263	286 aa	Known RBP	5.2	□□□□□ -1.58
UBI4	YLL039C	ANP1	P32629	500 aa		5.2	□□□□□ -1.58
UBI4	YLL039C	RER2	P35196	286 aa		5.2	□□□□□ -1.58
UBI4	YLL039C	ISW1	P38144	1129 aa		5.2	□□□□□ -1.58
UBI4	YLL039C	TIF4631	P39935	952 aa	Known RBP	5.2	□□□□□ -1.58
UBI4	YLL039C	YIL165C	P40446	119 aa		5.2	□□□□□ -1.58
UBI4	YLL039C	NET1	P47035	1189 aa		5.2	□□□□□ -1.58
UBI4	YLL039C	AIM44	Q99299	758 aa		5.2	□□□□□ -1.58
UBI4	YLL039C	TUS1	Q06412	1307 aa		5.2	□□□□□ -1.58
UBI4	YLL039C	FBP1	P09201	348 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	ACE2	P21192	770 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	RIT1	P23796	513 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	PEP3	P27801	918 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	IMP2'	P32351	346 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	ISC10	P32645	267 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	PES4	P39684	611 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	LYS14	P40971	790 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	PPT1	P53043	513 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	HDA1	P53973	706 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	RSC2	Q06488	889 aa		5.19	□□□□□ -1.58
UBI4	YLL039C	PGA3	Q12746	312 aa	Known RBP	5.19	□□□□□ -1.58
UBI4	YLL039C	TRL1	P09880	827 aa	Known RBP	5.18	□□□□□ -1.58
UBI4	YLL039C	MSN1	P22148	382 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	MAK31	P23059	88 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	PUP1	P25043	261 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	SAF1	P38352	637 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	VAB2	P40003	282 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	SPO22	P40511	975 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	SOL4	P53315	255 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	FOL1	P53848	824 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	RPT6	Q01939	405 aa	Known RBP	5.18	□□□□□ -1.58
UBI4	YLL039C	MYO5	Q04439	1219 aa	Known RBP	5.18	□□□□□ -1.58
UBI4	YLL039C	EST2	Q06163	884 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	TFC6	Q06339	672 aa		5.18	□□□□□ -1.58
UBI4	YLL039C	ESF1	Q06344	628 aa	Known RBP	5.18	□□□□□ -1.58
UBI4	YLL039C	CFT2	Q12102	859 aa	Predicted RBP	5.18	□□□□□ -1.58
UBI4	YLL039C	SAM2	P19358	384 aa	Known RBP	5.17	□□□□□ -1.58
UBI4	YLL039C	PER1	P25625	357 aa		5.17	□□□□□ -1.58
UBI4	YLL039C	RPL8B	P29453	256 aa	Known RBP	5.17	□□□□□ -1.58
UBI4	YLL039C	NAM7	P30771	971 aa	Known RBP	5.17	□□□□□ -1.58
UBI4	YLL039C	MCD4	P36051	919 aa		5.17	□□□□□ -1.58
UBI4	YLL039C	AVT1	P47082	602 aa		5.17	□□□□□ -1.58
UBI4	YLL039C	DSE4	P53753	1117 aa		5.17	□□□□□ -1.58
UBI4	YLL039C	YML037C	Q03703	340 aa		5.17	□□□□□ -1.58
UBI4	YLL039C	REC8	Q12188	680 aa		5.17	□□□□□ -1.58
UBI4	YLL039C	CLF1	Q12309	687 aa	Predicted RBP	5.17	□□□□□ -1.58
UBI4	YLL039C	NUC1	P08466	329 aa		5.16	□□□□□ -1.58
UBI4	YLL039C	ERG7	P38604	731 aa		5.16	□□□□□ -1.58
UBI4	YLL039C	INP51	P40559	946 aa	Known RBP	5.16	□□□□□ -1.58
UBI4	YLL039C	KRI1	P42846	591 aa	Known RBP	5.16	□□□□□ -1.58
UBI4	YLL039C	ALG2	P43636	503 aa		5.16	□□□□□ -1.58
UBI4	YLL039C	RPS0B	P46654	252 aa	Known RBP	5.16	□□□□□ -1.58
UBI4	YLL039C	NCS6	P53088	359 aa		5.16	□□□□□ -1.58
UBI4	YLL039C	VPS30	Q02948	557 aa		5.16	□□□□□ -1.58
UBI4	YLL039C	EMG1	Q06287	252 aa	Known RBP	5.16	□□□□□ -1.58
UBI4	YLL039C	UBX5	Q06682	500 aa		5.16	□□□□□ -1.58
UBI4	YLL039C	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	5.16	□□□□□ -1.58	not detected
UBI4	YLL039C	RAD18	P10862	487 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	CHS2	P14180	963 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	SRP54	P20424	541 aa	Known RBP	5.15	□□□□□ -1.59
UBI4	YLL039C	ROX1	P25042	368 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	CDC60	P26637	1090 aa	Known RBP	5.15	□□□□□ -1.59
UBI4	YLL039C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	5.15	□□□□□ -1.59	not detected
UBI4	YLL039C	MAL31	P38156	614 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	PAN5	P38787	379 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	VPS45	P38932	577 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	AKR1	P39010	764 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	CSM2	P40465	213 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	VID28	P40547	921 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	YGR130C	P53278	816 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	YLR225C	Q05948	407 aa	Known RBP	5.15	□□□□□ -1.59
UBI4	YLL039C	SGD1	Q06132	899 aa		5.15	□□□□□ -1.59
UBI4	YLL039C	LIP5	P32875	414 aa		5.14	□□□□□ -1.59
UBI4	YLL039C	TFA2	P36145	328 aa		5.14	□□□□□ -1.59
UBI4	YLL039C	BIO5	P53744	561 aa	Known RBP	5.14	□□□□□ -1.59
UBI4	YLL039C	MDM1	Q01846	1127 aa		5.14	□□□□□ -1.59
UBI4	YLL039C	YML020W	Q03722	664 aa		5.14	□□□□□ -1.59
UBI4	YLL039C	PUN1	Q06991	263 aa		5.14	□□□□□ -1.59
UBI4	YLL039C	TY3A-G	Q12173	290 aa		5.14	□□□□□ -1.59
UBI4	YLL039C	YOR111W	Q99210	232 aa		5.14	□□□□□ -1.59
UBI4	YLL039C	TY3A-I	Q99219	290 aa		5.14	□□□□□ -1.59
UBI4	YLL039C	RNR2	P09938	399 aa	Known RBP	5.13	□□□□□ -1.59
UBI4	YLL039C	MATALPHA2	P0CY08	210 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	HMLALPHA2	P0CY09	210 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	VMA2	P16140	517 aa	Known RBP	5.13	□□□□□ -1.59
UBI4	YLL039C	RNR3	P21672	869 aa	Known RBP	5.13	□□□□□ -1.59
UBI4	YLL039C	PHO88	P38264	188 aa	Predicted RBP	5.13	□□□□□ -1.59
UBI4	YLL039C	TOM71	P38825	639 aa	Known RBP	5.13	□□□□□ -1.59
UBI4	YLL039C	GPB2	P39717	880 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	YKE2	P52553	114 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	LSB1	P53281	241 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	YAF9	P53930	226 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	ARP5	P53946	755 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	ALD6	P54115	500 aa	Known RBP	5.13	□□□□□ -1.59
UBI4	YLL039C	SUE1	Q06524	206 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	BRE4	Q07660	1125 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	DSE3	Q08729	430 aa		5.13	□□□□□ -1.59
UBI4	YLL039C	SOG2	Q08817	791 aa		5.13	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 17.4 ms