RNA–Protein interactions for RNA: YKR020W

VPS51, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS51, Length 495 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS51YKR020W YRO2P38079 344 aa4.32□□□□□ -1.72
VPS51YKR020W ECM21P38167 1117 aaKnown RBP4.32□□□□□ -1.72
VPS51YKR020W TAT2P38967 592 aa4.32□□□□□ -1.72
VPS51YKR020W NPP2P39997 493 aa4.32□□□□□ -1.72
VPS51YKR020W ALR2P43553 858 aa4.32□□□□□ -1.72
VPS51YKR020W NAN1Q02931 896 aaKnown RBP4.32□□□□□ -1.72
VPS51YKR020W TUB2P02557 457 aaKnown RBP4.31□□□□□ -1.72
VPS51YKR020W SPE1P08432 466 aa4.31□□□□□ -1.72
VPS51YKR020W DOM34P33309 386 aa4.31□□□□□ -1.72
VPS51YKR020W YPT53P36019 220 aa4.31□□□□□ -1.72
VPS51YKR020W SHM2P37291 469 aaKnown RBP4.31□□□□□ -1.72
VPS51YKR020W MPT5P39016 859 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
VPS51YKR020W PFD1P46988 109 aa4.31□□□□□ -1.72
VPS51YKR020W PSP2P50109 593 aaKnown RBP4.31□□□□□ -1.72
VPS51YKR020W VPS62P53285 467 aa4.31□□□□□ -1.72
VPS51YKR020W UBX5Q06682 500 aa4.31□□□□□ -1.72
VPS51YKR020W CDA1Q06702 301 aa4.31□□□□□ -1.72
VPS51YKR020W PNS1Q12412 539 aa4.31□□□□□ -1.72
VPS51YKR020W HSF1P10961 833 aa4.3□□□□□ -1.72
VPS51YKR020W RAD4P14736 754 aa4.3□□□□□ -1.72
VPS51YKR020W ERT1P38140 529 aa4.3□□□□□ -1.72
VPS51YKR020W TIM54P47045 478 aa4.3□□□□□ -1.72
VPS51YKR020W MCM6P53091 1017 aaKnown RBP4.3□□□□□ -1.72
VPS51YKR020W YLR224WQ05947 369 aa4.3□□□□□ -1.72
VPS51YKR020W NOP12Q08208 459 aaKnown RBP4.3□□□□□ -1.72
VPS51YKR020W ADE8P04161 214 aa4.29□□□□□ -1.72
VPS51YKR020W NPP1P25353 742 aa4.29□□□□□ -1.72
VPS51YKR020W ARE1P25628 610 aa4.29□□□□□ -1.72
VPS51YKR020W CDC48P25694 835 aaKnown RBP4.29□□□□□ -1.72
VPS51YKR020W LST4P34239 828 aa4.29□□□□□ -1.72
VPS51YKR020W YBR284WP38150 797 aa4.29□□□□□ -1.72
VPS51YKR020W GYP7P48365 746 aa4.29□□□□□ -1.72
VPS51YKR020W ERP6P53198 216 aa4.29□□□□□ -1.72
VPS51YKR020W EAF1Q06337 982 aa4.29□□□□□ -1.72
VPS51YKR020W ADY3Q07732 790 aa4.29□□□□□ -1.72
VPS51YKR020W SPO75Q07798 868 aa4.29□□□□□ -1.72
VPS51YKR020W OSH2Q12451 1283 aa4.29□□□□□ -1.72
VPS51YKR020W RPP2AP05319 106 aaKnown RBP4.28□□□□□ -1.72
VPS51YKR020W TSL1P38427 1098 aaKnown RBP4.28□□□□□ -1.72
VPS51YKR020W MET12P46151 657 aa4.28□□□□□ -1.72
VPS51YKR020W FMP25Q08023 583 aa4.28□□□□□ -1.72
VPS51YKR020W HIS5P07172 385 aa4.27□□□□□ -1.73
VPS51YKR020W RPL8BP29453 256 aaKnown RBP4.27□□□□□ -1.73
VPS51YKR020W CDC11P32458 415 aa4.27□□□□□ -1.73
VPS51YKR020W PLB1P39105 664 aa4.27□□□□□ -1.73
VPS51YKR020W RAI1P53063 387 aaKnown RBP4.27□□□□□ -1.73
VPS51YKR020W WHI4Q07655 649 aaKnown RBP4.27□□□□□ -1.73
VPS51YKR020W NOT3P06102 836 aaKnown RBP4.26□□□□□ -1.73
VPS51YKR020W STE11P23561 717 aa4.26□□□□□ -1.73
VPS51YKR020W RPC82P32349 654 aa4.26□□□□□ -1.73
VPS51YKR020W HBS1P32769 611 aaKnown RBP4.26□□□□□ -1.73
VPS51YKR020W AFR1P33304 620 aa4.26□□□□□ -1.73
VPS51YKR020W YKR078WP36158 585 aaKnown RBP4.26□□□□□ -1.73
VPS51YKR020W SIT1P39980 628 aa4.26□□□□□ -1.73
VPS51YKR020W MNN10P50108 393 aaKnown RBP4.26□□□□□ -1.73
VPS51YKR020W YGR125WP53273 1036 aa4.26□□□□□ -1.73
VPS51YKR020W YPR071WQ12346 211 aa4.26□□□□□ -1.73
VPS51YKR020W NPC2Q12408 173 aa4.26□□□□□ -1.73
VPS51YKR020W HSP60P19882 572 aaKnown RBP4.25□□□□□ -1.73
VPS51YKR020W HCM1P25364 564 aa4.25□□□□□ -1.73
VPS51YKR020W LCD1Q04377 747 aa4.25□□□□□ -1.73
VPS51YKR020W MSD1P15179 658 aaKnown RBP4.24□□□□□ -1.73
VPS51YKR020W RFA1P22336 621 aaKnown RBP4.24□□□□□ -1.73
VPS51YKR020W TOK1P40310 691 aa4.24□□□□□ -1.73
VPS51YKR020W CCM1P48237 864 aaPredicted RBP4.24□□□□□ -1.73
VPS51YKR020W KCS1Q12494 1050 aa4.24□□□□□ -1.73
VPS51YKR020W MON2P48563 1636 aaPredicted RBP4.24□□□□□ -1.73
VPS51YKR020W RPD3P32561 433 aa4.23□□□□□ -1.73
VPS51YKR020W REC104P33323 182 aa4.23□□□□□ -1.73
VPS51YKR020W ATG19P35193 415 aa4.23□□□□□ -1.73
VPS51YKR020W CEP3P40969 608 aa4.23□□□□□ -1.73
VPS51YKR020W PHO23P50947 330 aa4.23□□□□□ -1.73
VPS51YKR020W UTP8P53276 713 aaKnown RBP4.23□□□□□ -1.73
VPS51YKR020W VPS30Q02948 557 aa4.23□□□□□ -1.73
VPS51YKR020W YDL124WQ07551 312 aaKnown RBP4.23□□□□□ -1.73
VPS51YKR020W HBN1Q96VH4 193 aa4.23□□□□□ -1.73
VPS51YKR020W TOP3P13099 656 aa4.22□□□□□ -1.73
VPS51YKR020W CAD1P24813 409 aaKnown RBP4.22□□□□□ -1.73
VPS51YKR020W SED4P25365 1065 aa4.22□□□□□ -1.73
VPS51YKR020W YJL049WP47048 450 aa4.22□□□□□ -1.73
VPS51YKR020W NPL3Q01560 414 aaKnown RBP RIP-Chip data4.22□□□□□ -1.73 RIP-Chip
VPS51YKR020W SSL1Q04673 461 aaPredicted RBP4.22□□□□□ -1.73
VPS51YKR020W CDC53Q12018 815 aaKnown RBP4.22□□□□□ -1.73
VPS51YKR020W RPS9AO13516 197 aaKnown RBP4.21□□□□□ -1.74
VPS51YKR020W CIT1P00890 479 aa4.21□□□□□ -1.74
VPS51YKR020W TOM70P07213 617 aaKnown RBP4.21□□□□□ -1.74
VPS51YKR020W STE13P33894 931 aa4.21□□□□□ -1.74
VPS51YKR020W PET10P36139 283 aa4.21□□□□□ -1.74
VPS51YKR020W HUL4P40985 892 aa4.21□□□□□ -1.74
VPS51YKR020W CHA4P43634 648 aa4.21□□□□□ -1.74
VPS51YKR020W YKE2P52553 114 aa4.21□□□□□ -1.74
VPS51YKR020W HUL5P53119 910 aa4.21□□□□□ -1.74
VPS51YKR020W BUL2Q03758 920 aaKnown RBP4.21□□□□□ -1.74
VPS51YKR020W FLC1Q08967 793 aa4.21□□□□□ -1.74
VPS51YKR020W NTO1Q12311 748 aa4.21□□□□□ -1.74
VPS51YKR020W INO80P53115 1489 aa4.21□□□□□ -1.74
VPS51YKR020W PFK1P16861 987 aaKnown RBP4.2□□□□□ -1.74
VPS51YKR020W URA1P28272 314 aaPredicted RBP4.2□□□□□ -1.74
VPS51YKR020W TYE7P33122 291 aaPredicted RBP4.2□□□□□ -1.74
VPS51YKR020W TRM2P33753 639 aa4.2□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 61.1 ms