RNA–Protein interactions for RNA: YKR009C

FOX2, Transcript of 3-hydroxyacyl-CoA dehydrogenase and enoyl-CoA hydratase, yeast

Gene FOX2, Length 2,703 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FOX2	YKR009C	MBR1	P23493	339 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	MRX3	P38172	270 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	YHR202W	P38887	602 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	YEL076C	P39971	216 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	MMF1	P40185	145 aa	Known RBP	4.78	□□□□□ -1.64
FOX2	YKR009C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.78	□□□□□ -1.64	not detected
FOX2	YKR009C	IES4	Q08561	116 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	COX4	P04037	155 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	PGI1	P12709	554 aa	Known RBP	4.78	□□□□□ -1.64
FOX2	YKR009C	BUD6	P41697	788 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	CTF18	P49956	741 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	MNP1	P53163	194 aa	Predicted RBP	4.78	□□□□□ -1.64
FOX2	YKR009C	YNL134C	P53912	376 aa	Known RBP	4.78	□□□□□ -1.64
FOX2	YKR009C	PNG1	Q02890	363 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	SMC6	Q12749	1114 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	LAA1	P39526	2014 aa		4.78	□□□□□ -1.64
FOX2	YKR009C	RTC4	P53850	401 aa		4.77	□□□□□ -1.65
FOX2	YKR009C	SPO71	Q03868	1245 aa		4.77	□□□□□ -1.65
FOX2	YKR009C	TTI1	P36097	1038 aa		4.77	□□□□□ -1.65
FOX2	YKR009C	DID4	P36108	232 aa		4.77	□□□□□ -1.65
FOX2	YKR009C	YEL023C	P39992	682 aa		4.77	□□□□□ -1.65
FOX2	YKR009C	KRI1	P42846	591 aa	Known RBP	4.77	□□□□□ -1.65
FOX2	YKR009C	ACF4	P47129	309 aa		4.77	□□□□□ -1.65
FOX2	YKR009C	RTT102	P53330	157 aa		4.77	□□□□□ -1.65
FOX2	YKR009C	NCS2	P53923	493 aa	Predicted RBP	4.77	□□□□□ -1.65
FOX2	YKR009C	ARK1	P53974	638 aa		4.77	□□□□□ -1.65
FOX2	YKR009C	CDC48	P25694	835 aa	Known RBP	4.76	□□□□□ -1.65
FOX2	YKR009C	ADK2	P26364	225 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	SNF7	P39929	240 aa	Known RBP	4.76	□□□□□ -1.65
FOX2	YKR009C	LAM5	P43560	674 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	BFA1	P47113	574 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	SCY1	P53009	804 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	PGA2	P53903	129 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	YNL146W	P53906	100 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	SPP1	Q03012	353 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
FOX2	YKR009C	ISY1	P21374	235 aa	Predicted RBP	4.76	□□□□□ -1.65
FOX2	YKR009C	MRF1	P30775	413 aa	Predicted RBP	4.76	□□□□□ -1.65
FOX2	YKR009C	CYS3	P31373	394 aa	Known RBP	4.76	□□□□□ -1.65
FOX2	YKR009C	MNN4	P36044	1178 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	PGM2	P37012	569 aa	Known RBP	4.76	□□□□□ -1.65
FOX2	YKR009C	SIP3	P38717	1229 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	YIR014W	P40570	242 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	ENV11	P53246	860 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	CBK1	P53894	756 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	SEC5	P89102	971 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	YDR344C	Q05510	147 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	SVF1	Q05515	481 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	NCR1	Q12200	1170 aa		4.76	□□□□□ -1.65
FOX2	YKR009C	RPL19A	P0CX82	189 aa	Known RBP	4.75	□□□□□ -1.65
FOX2	YKR009C	RPL19B	P0CX83	189 aa	Predicted RBP	4.75	□□□□□ -1.65
FOX2	YKR009C	YSC83	P32792	385 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	HMT1	P38074	348 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	RIM4	P38741	713 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	YER186C	P40101	306 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	SHE10	P53075	577 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	CUL3	P53202	744 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	CDC53	Q12018	815 aa	Known RBP	4.75	□□□□□ -1.65
FOX2	YKR009C	YOR022C	Q12204	715 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	PRC1	P00729	532 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	CPA2	P03965	1118 aa	Known RBP	4.75	□□□□□ -1.65
FOX2	YKR009C	URA1	P28272	314 aa	Predicted RBP	4.75	□□□□□ -1.65
FOX2	YKR009C	RPN3	P40016	523 aa	Known RBP	4.75	□□□□□ -1.65
FOX2	YKR009C	ALT2	P52892	507 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	PIG1	Q06216	648 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	NBL1	Q3E7Y6	73 aa		4.75	□□□□□ -1.65
FOX2	YKR009C	HSP82	P02829	709 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	PCK1	P10963	549 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	PEP7	P32609	515 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	VPS35	P34110	944 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	RDH54	P38086	958 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	ULP2	P40537	1034 aa	Predicted RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	FAF1	P40546	346 aa	Predicted RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	AVT1	P47082	602 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	CUE3	P53137	624 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	SDA1	P53313	767 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	FRS2	P15625	503 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	DBP5	P20449	482 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	RSA4	P25382	515 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	SEC21	P32074	935 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	ATG19	P35193	415 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	RFT1	P38206	574 aa	Predicted RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	RFC5	P38251	354 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	PIH1	P38768	344 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	HUL4	P40985	892 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	ADY4	Q05955	493 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	MRI1	Q06489	411 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	NOC3	Q07896	663 aa	Predicted RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	HXK1	P04806	485 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	HAP2	P06774	265 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	NAM7	P30771	971 aa	Known RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	SKG6	P32900	734 aa	Predicted RBP	4.74	□□□□□ -1.65
FOX2	YKR009C	YBR284W	P38150	797 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	MAL33	P38157	468 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	UBA2	P52488	636 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	TAM41	P53230	385 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	OSW2	Q12202	724 aa		4.74	□□□□□ -1.65
FOX2	YKR009C	TOM70	P07213	617 aa	Known RBP	4.73	□□□□□ -1.65
FOX2	YKR009C	ATP1	P07251	545 aa	Known RBP	4.73	□□□□□ -1.65
FOX2	YKR009C	KEX2	P13134	814 aa		4.73	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 44.1 ms