RNA–Protein interactions for RNA: YKL039W

PTM1, Transcript of Protein of unknown function, yeastyeast

Gene PTM1, Length 1,572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PTM1YKL039W ROT1Q03691 256 aa6.14□□□□□ -1.43
PTM1YKL039W BUL2Q03758 920 aaKnown RBP6.14□□□□□ -1.43
PTM1YKL039W FLC1Q08967 793 aa6.14□□□□□ -1.43
PTM1YKL039W CDC53Q12018 815 aaKnown RBP6.14□□□□□ -1.43
PTM1YKL039W STI1P15705 589 aaKnown RBP RIP-Chip data6.13□□□□□ -1.43not detected
PTM1YKL039W YER158CP40095 573 aa6.13□□□□□ -1.43
PTM1YKL039W YOR352WQ08816 343 aa6.13□□□□□ -1.43
PTM1YKL039W YPL277CQ08989 487 aa6.13□□□□□ -1.43
PTM1YKL039W RPS13P05756 151 aaKnown RBP6.12□□□□□ -1.43
PTM1YKL039W PRP6P19735 899 aaPredicted RBP6.12□□□□□ -1.43
PTM1YKL039W YKR078WP36158 585 aaKnown RBP6.12□□□□□ -1.43
PTM1YKL039W YRO2P38079 344 aa6.12□□□□□ -1.43
PTM1YKL039W ECM21P38167 1117 aaKnown RBP6.12□□□□□ -1.43
PTM1YKL039W MEF2P39677 819 aa6.12□□□□□ -1.43
PTM1YKL039W RIM8P53179 542 aa6.12□□□□□ -1.43
PTM1YKL039W GCN5Q03330 439 aa6.12□□□□□ -1.43
PTM1YKL039W TAF8Q03750 510 aa6.12□□□□□ -1.43
PTM1YKL039W DUS4Q06063 367 aa6.12□□□□□ -1.43
PTM1YKL039W HBN1Q96VH4 193 aa6.12□□□□□ -1.43
PTM1YKL039W SOD2P00447 233 aa6.11□□□□□ -1.43
PTM1YKL039W ADE8P04161 214 aa6.11□□□□□ -1.43
PTM1YKL039W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.11□□□□□ -1.43not detected
PTM1YKL039W CDC6P09119 513 aa6.1□□□□□ -1.43
PTM1YKL039W SRP101P32916 621 aa6.1□□□□□ -1.43
PTM1YKL039W THI80P35202 319 aa6.1□□□□□ -1.43
PTM1YKL039W YBR284WP38150 797 aa6.1□□□□□ -1.43
PTM1YKL039W YBR238CP38330 731 aaKnown RBP6.1□□□□□ -1.43
PTM1YKL039W MND2P40577 368 aa6.1□□□□□ -1.43
PTM1YKL039W IRC24P40580 263 aa6.1□□□□□ -1.43
PTM1YKL039W YKE2P52553 114 aa6.1□□□□□ -1.43
PTM1YKL039W CDA1Q06702 301 aa6.1□□□□□ -1.43
PTM1YKL039W RPC82P32349 654 aa6.1□□□□□ -1.43
PTM1YKL039W CDC11P32458 415 aa6.1□□□□□ -1.43
PTM1YKL039W RSP5P39940 809 aaKnown RBP6.1□□□□□ -1.43
PTM1YKL039W ZRG8P40021 1076 aa6.1□□□□□ -1.43
PTM1YKL039W TOK1P40310 691 aa6.1□□□□□ -1.43
PTM1YKL039W PPM2Q08282 695 aa6.1□□□□□ -1.43
PTM1YKL039W TOP3P13099 656 aa6.09□□□□□ -1.43
PTM1YKL039W MSD1P15179 658 aaKnown RBP6.09□□□□□ -1.43
PTM1YKL039W CDC48P25694 835 aaKnown RBP6.09□□□□□ -1.43
PTM1YKL039W SRP40P32583 406 aaPredicted RBP6.09□□□□□ -1.43
PTM1YKL039W PET10P36139 283 aa6.09□□□□□ -1.43
PTM1YKL039W LCD1Q04377 747 aa6.09□□□□□ -1.43
PTM1YKL039W YPR071WQ12346 211 aa6.09□□□□□ -1.43
PTM1YKL039W YTA7P40340 1379 aa6.08□□□□□ -1.44
PTM1YKL039W ENA1P13587 1091 aa6.08□□□□□ -1.44
PTM1YKL039W YKL091CP33324 310 aaKnown RBP6.08□□□□□ -1.44
PTM1YKL039W SPT20P50875 604 aa6.08□□□□□ -1.44
PTM1YKL039W RTA1P53047 317 aa6.08□□□□□ -1.44
PTM1YKL039W YGR012WP53206 393 aa6.08□□□□□ -1.44
PTM1YKL039W GTF1P53260 183 aaPredicted RBP6.08□□□□□ -1.44
PTM1YKL039W ENA2Q01896 1091 aa6.08□□□□□ -1.44
PTM1YKL039W RPN4Q03465 531 aa6.08□□□□□ -1.44
PTM1YKL039W ENA5Q12691 1091 aa6.08□□□□□ -1.44
PTM1YKL039W REV3P14284 1504 aa6.08□□□□□ -1.44
PTM1YKL039W CAN1P04817 590 aa6.07□□□□□ -1.44
PTM1YKL039W BET3P36149 193 aa6.07□□□□□ -1.44
PTM1YKL039W HUL4P40985 892 aa6.07□□□□□ -1.44
PTM1YKL039W VPS62P53285 467 aa6.07□□□□□ -1.44
PTM1YKL039W PBP1P53297 722 aaKnown RBP6.07□□□□□ -1.44
PTM1YKL039W YPR196WQ06595 470 aa6.07□□□□□ -1.44
PTM1YKL039W YDL124WQ07551 312 aaKnown RBP6.07□□□□□ -1.44
PTM1YKL039W ADY3Q07732 790 aa6.07□□□□□ -1.44
PTM1YKL039W TPO1Q07824 586 aa6.07□□□□□ -1.44
PTM1YKL039W GPB1Q08886 897 aa6.07□□□□□ -1.44
PTM1YKL039W HMI1Q12039 706 aa6.07□□□□□ -1.44
PTM1YKL039W HSF1P10961 833 aa6.06□□□□□ -1.44
PTM1YKL039W GAL11P19659 1081 aa6.06□□□□□ -1.44
PTM1YKL039W TOD6P34219 525 aa6.06□□□□□ -1.44
PTM1YKL039W CCM1P48237 864 aaPredicted RBP6.06□□□□□ -1.44
PTM1YKL039W GCV2P49095 1034 aa6.06□□□□□ -1.44
PTM1YKL039W CDC20P26309 610 aa6.06□□□□□ -1.44
PTM1YKL039W PBP2P38151 413 aaKnown RBP RIP-Chip data6.06□□□□□ -1.44not detected
PTM1YKL039W GGA2P38817 585 aaKnown RBP6.06□□□□□ -1.44
PTM1YKL039W UBP5P39944 805 aa6.06□□□□□ -1.44
PTM1YKL039W RXT3Q07458 294 aa6.06□□□□□ -1.44
PTM1YKL039W YOR131CQ12486 218 aa6.06□□□□□ -1.44
PTM1YKL039W PEP1P32319 1579 aa6.06□□□□□ -1.44
PTM1YKL039W SPE1P08432 466 aa6.05□□□□□ -1.44
PTM1YKL039W EMC1P25574 760 aa6.05□□□□□ -1.44
PTM1YKL039W SCT1P32784 759 aa6.05□□□□□ -1.44
PTM1YKL039W DOM34P33309 386 aa6.05□□□□□ -1.44
PTM1YKL039W REC104P33323 182 aa6.05□□□□□ -1.44
PTM1YKL039W POA1P38218 177 aa6.05□□□□□ -1.44
PTM1YKL039W UBP6P43593 499 aaKnown RBP6.05□□□□□ -1.44
PTM1YKL039W YAP6Q03935 383 aa6.05□□□□□ -1.44
PTM1YKL039W ACK1Q07622 623 aaPredicted RBP6.05□□□□□ -1.44
PTM1YKL039W BUD6P41697 788 aa6.04□□□□□ -1.44
PTM1YKL039W PRE10P21242 288 aaKnown RBP RIP-Chip data6.03□□□□□ -1.44not detected
PTM1YKL039W RAI1P53063 387 aaKnown RBP6.03□□□□□ -1.44
PTM1YKL039W MET12P46151 657 aa6.02□□□□□ -1.45
PTM1YKL039W ORC1P54784 914 aaPredicted RBP6.02□□□□□ -1.45
PTM1YKL039W NOT3P06102 836 aaKnown RBP6.01□□□□□ -1.45
PTM1YKL039W TOM70P07213 617 aaKnown RBP6.01□□□□□ -1.45
PTM1YKL039W ERR1P0CX10 437 aa6.01□□□□□ -1.45
PTM1YKL039W ERR2P0CX11 437 aa6.01□□□□□ -1.45
PTM1YKL039W TIM23P32897 222 aa6.01□□□□□ -1.45
PTM1YKL039W FLR1P38124 548 aa6.01□□□□□ -1.45
PTM1YKL039W PSP2P50109 593 aaKnown RBP6.01□□□□□ -1.45
PTM1YKL039W ENV7Q12003 364 aa6.01□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 28.5 ms