RNA–Protein interactions for RNA: YKL020C

SPT23, Transcript of ER membrane protein involved in regulation of OLE1 transcription, yeast

Gene SPT23, Length 3,249 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPT23	YKL020C	YRF1-1	P0CX20	1796 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	YRF1-5	P0CX21	1796 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	YRF1-8	P0CX22	1796 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	ADE3	P07245	946 aa	Known RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	TAL1	P15019	335 aa	Known RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	TYR1	P20049	452 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	TPS2	P31688	896 aa	Known RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	UBC6	P33296	250 aa	Predicted RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	HSP78	P33416	811 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	AMN1	P38285	549 aa	Predicted RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	MRX1	P40050	688 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	YJL070C	P40361	888 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	FKH1	P40466	484 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	YIL001W	P40560	513 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	SBE2	P42223	864 aa	Known RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	STB1	P42845	420 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	APS3	P47064	194 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	VTC4	P47075	721 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	YGR153W	P48238	217 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	ARI1	P53111	347 aa	Known RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	SDA1	P53313	767 aa	Known RBP	4.21	□□□□□ -1.74
SPT23	YKL020C	SPO1	P53541	631 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	IPI3	P53877	555 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
SPT23	YKL020C	CTI6	Q08923	506 aa		4.21	□□□□□ -1.74
SPT23	YKL020C	TRP5	P00931	707 aa	Known RBP	4.2	□□□□□ -1.74
SPT23	YKL020C	VPS1	P21576	704 aa	Known RBP	4.2	□□□□□ -1.74
SPT23	YKL020C	VAN1	P23642	535 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	VPH2	P32341	215 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	SFA1	P32771	386 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	RPC34	P32910	317 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	TFC4	P33339	1025 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	YKL063C	P35725	167 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	YAP1801	P38856	637 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	JJJ2	P46997	583 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	ATH1	P48016	1211 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	TRF5	P48561	642 aa	Known RBP	4.2	□□□□□ -1.74
SPT23	YKL020C	UBA2	P52488	636 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	MIG2	P53035	382 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	RRP17	Q04031	235 aa	Predicted RBP	4.2	□□□□□ -1.74
SPT23	YKL020C	DCS1	Q06151	350 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	SUB2	Q07478	446 aa	Known RBP	4.2	□□□□□ -1.74
SPT23	YKL020C	MAK21	Q12176	1025 aa	Known RBP	4.2	□□□□□ -1.74
SPT23	YKL020C	VMR1	P38735	1592 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	TOM70	P07213	617 aa	Known RBP	4.2	□□□□□ -1.74
SPT23	YKL020C	FUS1	P11710	512 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	GLK1	P17709	500 aa	Known RBP	4.2	□□□□□ -1.74
SPT23	YKL020C	SCT1	P32784	759 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	VID27	P40157	782 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	SGM1	P47166	707 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	HGH1	P48362	394 aa	Known RBP	4.2	□□□□□ -1.74
SPT23	YKL020C	YLR352W	Q06479	807 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	APL4	Q12028	832 aa		4.2	□□□□□ -1.74
SPT23	YKL020C	INH1	P01097	85 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	GAL1	P04385	528 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	ARG1	P22768	420 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	KRE6	P32486	720 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	SLA2	P33338	968 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	YKL222C	P35995	705 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	BAP2	P38084	609 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	MAK5	P38112	773 aa	Predicted RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	PCH2	P38126	564 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	SMC2	P38989	1170 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	XKS1	P42826	600 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	SNZ3	P43545	298 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	SNZ2	P53824	298 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	SGD1	Q06132	899 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	NUP188	P52593	1655 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	PGI1	P12709	554 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	YAP1	P19880	650 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	PRP22	P24384	1145 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	MEF1	P25039	761 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	PRD1	P25375	712 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	HEM3	P28789	327 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	YBL028C	P38202	106 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	REI1	P38344	393 aa	Predicted RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	FYV8	P46949	817 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	STR2	P47164	639 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	RBL2	P48606	106 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	ATG1	P53104	897 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	MPS2	P53159	387 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	YGR266W	P53326	701 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	HOL1	P53389	586 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	ALF1	P53904	254 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	ERO1	Q03103	563 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	CRN1	Q06440	651 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	ATG23	Q06671	453 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	MRN1	Q08925	612 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
SPT23	YKL020C	TSR3	Q12094	313 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	MED4	Q12343	284 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	HTZ1	Q12692	134 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	RTP1	Q12751	981 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	DDP1	Q99321	188 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	RPO41	P13433	1351 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	PWP1	P21304	576 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	EUG1	P32474	517 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	DUR3	P33413	735 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	GLO3	P38682	493 aa	Known RBP	4.19	□□□□□ -1.74
SPT23	YKL020C	KIC1	P38692	1080 aa		4.19	□□□□□ -1.74
SPT23	YKL020C	YHR020W	P38708	688 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 167.9 ms