RNA–Protein interactions for RNA: YKL006C-A

SFT1, Transcript of Intra-Golgi v-SNARE, yeastyeast

Gene SFT1, Length 294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFT1YKL006C-A CCC2P38995 1004 aa4.88□□□□□ -1.63
SFT1YKL006C-A MET12P46151 657 aa4.88□□□□□ -1.63
SFT1YKL006C-A MNN10P50108 393 aaKnown RBP4.88□□□□□ -1.63
SFT1YKL006C-A SFB2P53953 876 aa4.88□□□□□ -1.63
SFT1YKL006C-A HMI1Q12039 706 aa4.88□□□□□ -1.63
SFT1YKL006C-A HIS5P07172 385 aa4.87□□□□□ -1.63
SFT1YKL006C-A CTS1P29029 562 aa4.87□□□□□ -1.63
SFT1YKL006C-A LST4P34239 828 aa4.87□□□□□ -1.63
SFT1YKL006C-A YRO2P38079 344 aa4.87□□□□□ -1.63
SFT1YKL006C-A PLB1P39105 664 aa4.87□□□□□ -1.63
SFT1YKL006C-A GUS1P46655 708 aaKnown RBP RIP-Chip data4.87□□□□□ -1.63not detected
SFT1YKL006C-A NOP12Q08208 459 aaKnown RBP4.87□□□□□ -1.63
SFT1YKL006C-A STE5P32917 917 aa4.86□□□□□ -1.63
SFT1YKL006C-A GYP7P48365 746 aa4.86□□□□□ -1.63
SFT1YKL006C-A ADY3Q07732 790 aa4.86□□□□□ -1.63
SFT1YKL006C-A SPO75Q07798 868 aa4.86□□□□□ -1.63
SFT1YKL006C-A PRP9P19736 530 aaKnown RBP4.85□□□□□ -1.63
SFT1YKL006C-A NPP2P39997 493 aa4.85□□□□□ -1.63
SFT1YKL006C-A YER158CP40095 573 aa4.85□□□□□ -1.63
SFT1YKL006C-A CDA1Q06702 301 aa4.85□□□□□ -1.63
SFT1YKL006C-A TUB2P02557 457 aaKnown RBP4.84□□□□□ -1.63
SFT1YKL006C-A SPE1P08432 466 aa4.84□□□□□ -1.63
SFT1YKL006C-A STE11P23561 717 aa4.84□□□□□ -1.63
SFT1YKL006C-A HCM1P25364 564 aa4.84□□□□□ -1.63
SFT1YKL006C-A CDC48P25694 835 aaKnown RBP4.84□□□□□ -1.63
SFT1YKL006C-A RPC82P32349 654 aa4.84□□□□□ -1.63
SFT1YKL006C-A ALR2P43553 858 aa4.84□□□□□ -1.63
SFT1YKL006C-A EAF1Q06337 982 aa4.84□□□□□ -1.63
SFT1YKL006C-A SSF2Q12153 453 aaPredicted RBP4.84□□□□□ -1.63
SFT1YKL006C-A CDC11P32458 415 aa4.83□□□□□ -1.64
SFT1YKL006C-A ATG19P35193 415 aa4.83□□□□□ -1.64
SFT1YKL006C-A YKR078WP36158 585 aaKnown RBP4.83□□□□□ -1.64
SFT1YKL006C-A CHA4P43634 648 aa4.83□□□□□ -1.64
SFT1YKL006C-A NAN1Q02931 896 aaKnown RBP4.83□□□□□ -1.64
SFT1YKL006C-A NPP1P25353 742 aa4.82□□□□□ -1.64
SFT1YKL006C-A SCT1P32784 759 aa4.82□□□□□ -1.64
SFT1YKL006C-A YBR284WP38150 797 aa4.82□□□□□ -1.64
SFT1YKL006C-A TSL1P38427 1098 aaKnown RBP4.82□□□□□ -1.64
SFT1YKL006C-A IOC3P43596 787 aa4.82□□□□□ -1.64
SFT1YKL006C-A VPS30Q02948 557 aa4.82□□□□□ -1.64
SFT1YKL006C-A OSH2Q12451 1283 aa4.82□□□□□ -1.64
SFT1YKL006C-A NOT3P06102 836 aaKnown RBP4.81□□□□□ -1.64
SFT1YKL006C-A RFA1P22336 621 aaKnown RBP4.81□□□□□ -1.64
SFT1YKL006C-A ARE1P25628 610 aa4.81□□□□□ -1.64
SFT1YKL006C-A TRM2P33753 639 aa4.81□□□□□ -1.64
SFT1YKL006C-A PHO23P50947 330 aa4.81□□□□□ -1.64
SFT1YKL006C-A RAI1P53063 387 aaKnown RBP4.81□□□□□ -1.64
SFT1YKL006C-A GSF2Q04697 403 aaKnown RBP4.81□□□□□ -1.64
SFT1YKL006C-A UBX5Q06682 500 aa4.81□□□□□ -1.64
SFT1YKL006C-A WHI4Q07655 649 aaKnown RBP4.81□□□□□ -1.64
SFT1YKL006C-A FMP25Q08023 583 aa4.81□□□□□ -1.64
SFT1YKL006C-A YPR071WQ12346 211 aa4.81□□□□□ -1.64
SFT1YKL006C-A RAD4P14736 754 aa4.8□□□□□ -1.64
SFT1YKL006C-A RPL8BP29453 256 aaKnown RBP4.8□□□□□ -1.64
SFT1YKL006C-A SIT1P39980 628 aa4.8□□□□□ -1.64
SFT1YKL006C-A PFD1P46988 109 aa4.8□□□□□ -1.64
SFT1YKL006C-A CCM1P48237 864 aaPredicted RBP4.8□□□□□ -1.64
SFT1YKL006C-A ERP6P53198 216 aa4.8□□□□□ -1.64
SFT1YKL006C-A UTP8P53276 713 aaKnown RBP4.8□□□□□ -1.64
SFT1YKL006C-A LCD1Q04377 747 aa4.8□□□□□ -1.64
SFT1YKL006C-A HBS1P32769 611 aaKnown RBP4.79□□□□□ -1.64
SFT1YKL006C-A REC104P33323 182 aa4.79□□□□□ -1.64
SFT1YKL006C-A KCS1Q12494 1050 aa4.79□□□□□ -1.64
SFT1YKL006C-A HSP60P19882 572 aaKnown RBP4.78□□□□□ -1.64
SFT1YKL006C-A CAD1P24813 409 aaKnown RBP4.78□□□□□ -1.64
SFT1YKL006C-A SED4P25365 1065 aa4.78□□□□□ -1.64
SFT1YKL006C-A DCG1P32460 244 aa4.78□□□□□ -1.64
SFT1YKL006C-A TIM54P47045 478 aa4.78□□□□□ -1.64
SFT1YKL006C-A YGR125WP53273 1036 aa4.78□□□□□ -1.64
SFT1YKL006C-A URN1Q06525 465 aaKnown RBP4.78□□□□□ -1.64
SFT1YKL006C-A NTO1Q12311 748 aa4.78□□□□□ -1.64
SFT1YKL006C-A NPC2Q12408 173 aa4.78□□□□□ -1.64
SFT1YKL006C-A PNS1Q12412 539 aa4.78□□□□□ -1.64
SFT1YKL006C-A PMA1P05030 918 aaKnown RBP4.77□□□□□ -1.65
SFT1YKL006C-A PFK1P16861 987 aaKnown RBP4.77□□□□□ -1.65
SFT1YKL006C-A AFR1P33304 620 aa4.77□□□□□ -1.65
SFT1YKL006C-A ERT1P38140 529 aa4.77□□□□□ -1.65
SFT1YKL006C-A TOK1P40310 691 aa4.77□□□□□ -1.65
SFT1YKL006C-A URM1P40554 99 aaPredicted RBP4.77□□□□□ -1.65
SFT1YKL006C-A CEP3P40969 608 aa4.77□□□□□ -1.65
SFT1YKL006C-A YKE2P52553 114 aa4.77□□□□□ -1.65
SFT1YKL006C-A NCS6P53088 359 aa4.77□□□□□ -1.65
SFT1YKL006C-A STE13P33894 931 aa4.76□□□□□ -1.65
SFT1YKL006C-A HUL4P40985 892 aa4.76□□□□□ -1.65
SFT1YKL006C-A MSE1P48525 536 aa4.76□□□□□ -1.65
SFT1YKL006C-A EXG2P52911 562 aa4.76□□□□□ -1.65
SFT1YKL006C-A SSL1Q04673 461 aaPredicted RBP4.76□□□□□ -1.65
SFT1YKL006C-A AIM39Q08223 395 aa4.76□□□□□ -1.65
SFT1YKL006C-A HBN1Q96VH4 193 aa4.76□□□□□ -1.65
SFT1YKL006C-A PMI40P29952 429 aaKnown RBP4.75□□□□□ -1.65
SFT1YKL006C-A RPD3P32561 433 aa4.75□□□□□ -1.65
SFT1YKL006C-A YBR238CP38330 731 aaKnown RBP4.75□□□□□ -1.65
SFT1YKL006C-A YIL108WP40483 696 aaKnown RBP4.75□□□□□ -1.65
SFT1YKL006C-A PUS9Q12069 462 aa4.75□□□□□ -1.65
SFT1YKL006C-A UPC2Q12151 913 aa4.75□□□□□ -1.65
SFT1YKL006C-A RPS9AO13516 197 aaKnown RBP4.74□□□□□ -1.65
SFT1YKL006C-A CIT1P00890 479 aa4.74□□□□□ -1.65
SFT1YKL006C-A AIM21P40563 679 aa4.74□□□□□ -1.65
SFT1YKL006C-A YJL049WP47048 450 aa4.74□□□□□ -1.65
SFT1YKL006C-A SUN4P53616 420 aa4.74□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 57.6 ms