RNA–Protein interactions for RNA: YIR039C

YPS6, Transcript of Putative GPI-anchored aspartic protease, yeast

Gene YPS6, Length 1,614 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YPS6	YIR039C	TIF35	Q04067	274 aa	Known RBP	4.1	□□□□□ -1.75
YPS6	YIR039C	EAF1	Q06337	982 aa		4.1	□□□□□ -1.75
YPS6	YIR039C	YLL054C	Q12244	843 aa		4.1	□□□□□ -1.75
YPS6	YIR039C	YLR419W	Q06698	1435 aa	Known RBP	4.09	□□□□□ -1.75
YPS6	YIR039C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
YPS6	YIR039C	ERS1	P17261	260 aa		4.09	□□□□□ -1.76
YPS6	YIR039C	SRM1	P21827	482 aa		4.09	□□□□□ -1.76
YPS6	YIR039C	ARE1	P25628	610 aa		4.09	□□□□□ -1.76
YPS6	YIR039C	NEM1	P38757	446 aa		4.09	□□□□□ -1.76
YPS6	YIR039C	UTP22	P53254	1237 aa	Predicted RBP	4.09	□□□□□ -1.76
YPS6	YIR039C	NTG2	Q08214	380 aa		4.09	□□□□□ -1.76
YPS6	YIR039C	RKM4	Q12504	494 aa		4.09	□□□□□ -1.76
YPS6	YIR039C	PRP9	P19736	530 aa	Known RBP	4.08	□□□□□ -1.76
YPS6	YIR039C	SYP1	P25623	870 aa	Known RBP	4.08	□□□□□ -1.76
YPS6	YIR039C	CRP1	P38845	465 aa	Known RBP	4.08	□□□□□ -1.76
YPS6	YIR039C	HUL4	P40985	892 aa		4.08	□□□□□ -1.76
YPS6	YIR039C	NOP2	P40991	618 aa	Known RBP	4.08	□□□□□ -1.76
YPS6	YIR039C	UTP5	Q04177	643 aa	Known RBP	4.08	□□□□□ -1.76
YPS6	YIR039C	EST2	Q06163	884 aa		4.08	□□□□□ -1.76
YPS6	YIR039C	YIG1	Q08956	461 aa		4.08	□□□□□ -1.76
YPS6	YIR039C	YPL066W	Q12194	479 aa		4.08	□□□□□ -1.76
YPS6	YIR039C	DED1	P06634	604 aa	Known RBP	4.07	□□□□□ -1.76
YPS6	YIR039C	DBP5	P20449	482 aa	Known RBP	4.07	□□□□□ -1.76
YPS6	YIR039C	RNQ1	P25367	405 aa		4.07	□□□□□ -1.76
YPS6	YIR039C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
YPS6	YIR039C	BET3	P36149	193 aa		4.07	□□□□□ -1.76
YPS6	YIR039C	NUG1	P40010	520 aa	Known RBP	4.07	□□□□□ -1.76
YPS6	YIR039C	YEN1	P40028	759 aa		4.07	□□□□□ -1.76
YPS6	YIR039C	ALR2	P43553	858 aa		4.07	□□□□□ -1.76
YPS6	YIR039C	RAT1	Q02792	1006 aa	Known RBP	4.07	□□□□□ -1.76
YPS6	YIR039C	RPL8A	P17076	256 aa	Known RBP	4.06	□□□□□ -1.76
YPS6	YIR039C	YKL107W	P34251	309 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	ADD66	P36040	267 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	ATG14	P38270	344 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	REI1	P38344	393 aa	Predicted RBP	4.06	□□□□□ -1.76
YPS6	YIR039C	MBP1	P39678	833 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	CNN1	P43618	361 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	MTR4	P47047	1073 aa	Known RBP	4.06	□□□□□ -1.76
YPS6	YIR039C	GCV1	P48015	400 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	ZDS1	P50111	915 aa	Known RBP	4.06	□□□□□ -1.76
YPS6	YIR039C	MAL11	P53048	616 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	MEC3	Q02574	474 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	ADR1	P07248	1323 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	AFG2	P32794	780 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	PRS1	P32895	427 aa	Known RBP	4.06	□□□□□ -1.76
YPS6	YIR039C	MPH1	P40562	993 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	SLS1	P42900	643 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	YGL176C	P46945	554 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	YNR029C	P53729	429 aa	Known RBP	4.06	□□□□□ -1.76
YPS6	YIR039C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
YPS6	YIR039C	UGO1	Q03327	502 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	RKM2	Q03942	479 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	YDL124W	Q07551	312 aa	Known RBP	4.06	□□□□□ -1.76
YPS6	YIR039C	YOR223W	Q12015	292 aa		4.06	□□□□□ -1.76
YPS6	YIR039C	MLP1	Q02455	1875 aa	Known RBP	4.05	□□□□□ -1.76
YPS6	YIR039C	KRE5	P22023	1365 aa		4.05	□□□□□ -1.76
YPS6	YIR039C	BCK1	Q01389	1478 aa		4.05	□□□□□ -1.76
YPS6	YIR039C	HBS1	P32769	611 aa	Known RBP	4.05	□□□□□ -1.76
YPS6	YIR039C	ARL1	P38116	183 aa	Known RBP	4.05	□□□□□ -1.76
YPS6	YIR039C	SNF7	P39929	240 aa	Known RBP	4.05	□□□□□ -1.76
YPS6	YIR039C	AVO1	Q08236	1176 aa		4.05	□□□□□ -1.76
YPS6	YIR039C	ALG6	Q12001	544 aa	Known RBP	4.05	□□□□□ -1.76
YPS6	YIR039C	MSB1	P21339	1137 aa	Known RBP	4.04	□□□□□ -1.76
YPS6	YIR039C	MCM7	P38132	845 aa		4.04	□□□□□ -1.76
YPS6	YIR039C	GDH3	P39708	457 aa		4.04	□□□□□ -1.76
YPS6	YIR039C	HNT2	P49775	206 aa		4.04	□□□□□ -1.76
YPS6	YIR039C	NCE103	P53615	221 aa		4.04	□□□□□ -1.76
YPS6	YIR039C	DOT1	Q04089	582 aa	Known RBP	4.04	□□□□□ -1.76
YPS6	YIR039C	HBN1	Q96VH4	193 aa		4.04	□□□□□ -1.76
YPS6	YIR039C	SEG2	P34250	1132 aa		4.03	□□□□□ -1.76
YPS6	YIR039C	CCC2	P38995	1004 aa		4.03	□□□□□ -1.76
YPS6	YIR039C	SIP5	P40210	489 aa	Known RBP	4.03	□□□□□ -1.76
YPS6	YIR039C	HSV2	P50079	448 aa	Predicted RBP	4.03	□□□□□ -1.76
YPS6	YIR039C	RIA1	P53893	1110 aa		4.03	□□□□□ -1.76
YPS6	YIR039C	TFB2	Q02939	513 aa		4.03	□□□□□ -1.76
YPS6	YIR039C	YOL057W	Q08225	711 aa		4.03	□□□□□ -1.76
YPS6	YIR039C	DNF3	Q12674	1656 aa		4.03	□□□□□ -1.76
YPS6	YIR039C	MRC1	P25588	1096 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	SFP1	P32432	683 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	PEX6	P33760	1030 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	ALG3	P38179	458 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	RGD1	P38339	666 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	FUN12	P39730	1002 aa	Known RBP	4.03	□□□□□ -1.77
YPS6	YIR039C	TPM2	P40414	161 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	YNR063W	P53749	607 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	SDH1	Q00711	640 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	ATG13	Q06628	738 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	GIC2	Q06648	383 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	GNT1	Q12096	491 aa		4.03	□□□□□ -1.77
YPS6	YIR039C	TOP3	P13099	656 aa		4.02	□□□□□ -1.77
YPS6	YIR039C	SCT1	P32784	759 aa		4.02	□□□□□ -1.77
YPS6	YIR039C	GPT2	P36148	743 aa		4.02	□□□□□ -1.77
YPS6	YIR039C	GEM1	P39722	662 aa		4.02	□□□□□ -1.77
YPS6	YIR039C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.02	□□□□□ -1.77	not detected
YPS6	YIR039C	RCM1	P53972	490 aa		4.02	□□□□□ -1.77
YPS6	YIR039C	MAK10	Q02197	733 aa		4.02	□□□□□ -1.77
YPS6	YIR039C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.01	□□□□□ -1.77	not detected
YPS6	YIR039C	MEF1	P25039	761 aa		4.01	□□□□□ -1.77
YPS6	YIR039C	MLS1	P30952	554 aa		4.01	□□□□□ -1.77
YPS6	YIR039C	CDC11	P32458	415 aa		4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 101.8 ms