RNA–Protein interactions for RNA: YHR060W

VMA22, Transcript of Protein that is required for vacuolar H+-ATPase (V-ATPase) function, yeast

Gene VMA22, Length 546 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VMA22	YHR060W	PLC1	P32383	869 aa		5.18	□□□□□ -1.58
VMA22	YHR060W	YBR284W	P38150	797 aa		5.18	□□□□□ -1.58
VMA22	YHR060W	MPH1	P40562	993 aa		5.18	□□□□□ -1.58
VMA22	YHR060W	LSB3	P43603	459 aa	Known RBP	5.18	□□□□□ -1.58
VMA22	YHR060W	SPC105	P53148	917 aa		5.18	□□□□□ -1.58
VMA22	YHR060W	PBP1	P53297	722 aa	Known RBP	5.18	□□□□□ -1.58
VMA22	YHR060W	MET14	Q02196	202 aa		5.18	□□□□□ -1.58
VMA22	YHR060W	SRP1	Q02821	542 aa	Known RBP	5.18	□□□□□ -1.58
VMA22	YHR060W	LCD1	Q04377	747 aa		5.18	□□□□□ -1.58
VMA22	YHR060W	SRD1	P09007	221 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	COQ2	P32378	372 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	PRP19	P32523	503 aa	Known RBP	5.17	□□□□□ -1.58
VMA22	YHR060W	TFC4	P33339	1025 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	NIC96	P34077	839 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	STO1	P34160	861 aa	Known RBP	5.17	□□□□□ -1.58
VMA22	YHR060W	MPE1	P35728	441 aa	Known RBP	5.17	□□□□□ -1.58
VMA22	YHR060W	HSE1	P38753	452 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	RPT2	P40327	437 aa	Known RBP	5.17	□□□□□ -1.58
VMA22	YHR060W	AIM21	P40563	679 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	YNL034W	P53963	612 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	YNL018C	P53976	612 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	DOT1	Q04089	582 aa	Known RBP	5.17	□□□□□ -1.58
VMA22	YHR060W	DUS3	Q06053	668 aa	Known RBP	5.17	□□□□□ -1.58
VMA22	YHR060W	MLC2	Q06580	163 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	GUD1	Q07729	489 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	AVO1	Q08236	1176 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	YPR071W	Q12346	211 aa		5.17	□□□□□ -1.58
VMA22	YHR060W	CDC9	P04819	755 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-LR4	P0C2I8	440 aa	Known RBP	5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-DR6	P0CX70	440 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-ER1	P0CX71	440 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-LR2	P0CX72	440 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-PL	P0CX73	440 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-JR1	P0CX74	440 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-LR3	P0CX75	440 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-ML2	P0CX76	440 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	RAD18	P10862	487 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	RET1	P22276	1149 aa	Known RBP	5.16	□□□□□ -1.58
VMA22	YHR060W	YKL222C	P35995	705 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	JNM1	P36224	373 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	CKB2	P38930	258 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	EMP65	P40085	556 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	GZF3	P42944	551 aa	Known RBP	5.16	□□□□□ -1.58
VMA22	YHR060W	VPS53	P47061	822 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	DAM1	P53267	343 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TGL2	P54857	326 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	SVL3	Q03088	825 aa	Known RBP	5.16	□□□□□ -1.58
VMA22	YHR060W	MCA1	Q08601	432 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-GR1	Q12085	440 aa		5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-PR3	Q6Q5H1	440 aa	Known RBP	5.16	□□□□□ -1.58
VMA22	YHR060W	TY1A-OL	Q92392	440 aa	Known RBP	5.16	□□□□□ -1.58
VMA22	YHR060W	PIF1	P07271	859 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	SFL1	P20134	766 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	MLS1	P30952	554 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	PGM1	P33401	570 aa	Known RBP	5.15	□□□□□ -1.59
VMA22	YHR060W	HSP78	P33416	811 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	SPC29	P33419	253 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	YRO2	P38079	344 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	ALG3	P38179	458 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	SAF1	P38352	637 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	NEM1	P38757	446 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	VID27	P40157	782 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	SIP5	P40210	489 aa	Known RBP	5.15	□□□□□ -1.59
VMA22	YHR060W	SLS1	P42900	643 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	TAF1	P46677	1066 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	MET13	P53128	600 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	YPL260W	Q08977	551 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	PTC5	Q12511	572 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	RMP1	Q12530	201 aa		5.15	□□□□□ -1.59
VMA22	YHR060W	GAL1	P04385	528 aa		5.14	□□□□□ -1.59
VMA22	YHR060W	HSC82	P15108	705 aa	Known RBP	5.14	□□□□□ -1.59
VMA22	YHR060W	PCL2	P25693	308 aa		5.14	□□□□□ -1.59
VMA22	YHR060W	CAF16	P43569	289 aa		5.14	□□□□□ -1.59
VMA22	YHR060W	YJR096W	P47137	282 aa		5.14	□□□□□ -1.59
VMA22	YHR060W	CCM1	P48237	864 aa	Predicted RBP	5.14	□□□□□ -1.59
VMA22	YHR060W	NIT3	P49954	291 aa		5.14	□□□□□ -1.59
VMA22	YHR060W	CHS2	P14180	963 aa		5.13	□□□□□ -1.59
VMA22	YHR060W	GFD2	P25370	566 aa	Known RBP	5.13	□□□□□ -1.59
VMA22	YHR060W	NNK1	P36003	928 aa		5.13	□□□□□ -1.59
VMA22	YHR060W	DID4	P36108	232 aa		5.13	□□□□□ -1.59
VMA22	YHR060W	KAE1	P36132	386 aa		5.13	□□□□□ -1.59
VMA22	YHR060W	GPT2	P36148	743 aa		5.13	□□□□□ -1.59
VMA22	YHR060W	YAR028W	P39548	234 aa		5.13	□□□□□ -1.59
VMA22	YHR060W	OAF1	P39720	1047 aa	Predicted RBP	5.13	□□□□□ -1.59
VMA22	YHR060W	MNN11	P46985	422 aa	Known RBP	5.13	□□□□□ -1.59
VMA22	YHR060W	YGR045C	P53229	120 aa		5.13	□□□□□ -1.59
VMA22	YHR060W	SNP1	Q00916	300 aa	Predicted RBP	5.13	□□□□□ -1.59
VMA22	YHR060W	ALG6	Q12001	544 aa	Known RBP	5.13	□□□□□ -1.59
VMA22	YHR060W	PHO81	P17442	1178 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	KCC4	P25389	1037 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	AFG2	P32794	780 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	REC104	P33323	182 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	PNT1	P38969	423 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	AKR1	P39010	764 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	SAP185	P40856	1058 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	NIT2	P47016	307 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	YNR063W	P53749	607 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	MDM1	Q01846	1127 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	ATP25	Q03153	612 aa		5.12	□□□□□ -1.59
VMA22	YHR060W	YDR514C	Q04408	483 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms