RNA–Protein interactions for RNA: YHL022C

SPO11, Transcript of Meiosis-specific protein that initiates meiotic recombination, yeast

Gene SPO11, Length 1,197 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPO11	YHL022C	WRS1	Q12109	432 aa	Known RBP	5.74	□□□□□ -1.49
SPO11	YHL022C	GRX1	P25373	110 aa	Known RBP	5.73	□□□□□ -1.49
SPO11	YHL022C	AAR2	P32357	355 aa	Predicted RBP	5.73	□□□□□ -1.49
SPO11	YHL022C	MET12	P46151	657 aa		5.73	□□□□□ -1.49
SPO11	YHL022C	PFD1	P46988	109 aa		5.73	□□□□□ -1.49
SPO11	YHL022C	AFR1	P33304	620 aa		5.72	□□□□□ -1.49
SPO11	YHL022C	ERT1	P38140	529 aa		5.72	□□□□□ -1.49
SPO11	YHL022C	PLB1	P39105	664 aa		5.72	□□□□□ -1.49
SPO11	YHL022C	GYP7	P48365	746 aa		5.72	□□□□□ -1.49
SPO11	YHL022C	MCM6	P53091	1017 aa	Known RBP	5.72	□□□□□ -1.49
SPO11	YHL022C	NOP12	Q08208	459 aa	Known RBP	5.72	□□□□□ -1.49
SPO11	YHL022C	HIS5	P07172	385 aa		5.71	□□□□□ -1.5
SPO11	YHL022C	SPE1	P08432	466 aa		5.71	□□□□□ -1.5
SPO11	YHL022C	HSF1	P10961	833 aa		5.71	□□□□□ -1.5
SPO11	YHL022C	TSL1	P38427	1098 aa	Known RBP	5.71	□□□□□ -1.5
SPO11	YHL022C	YER158C	P40095	573 aa		5.71	□□□□□ -1.5
SPO11	YHL022C	NOP7	P53261	605 aa	Known RBP	5.71	□□□□□ -1.5
SPO11	YHL022C	YPR196W	Q06595	470 aa		5.71	□□□□□ -1.5
SPO11	YHL022C	HBS1	P32769	611 aa	Known RBP	5.7	□□□□□ -1.5
SPO11	YHL022C	YRO2	P38079	344 aa		5.7	□□□□□ -1.5
SPO11	YHL022C	MNN10	P50108	393 aa	Known RBP	5.7	□□□□□ -1.5
SPO11	YHL022C	WHI4	Q07655	649 aa	Known RBP	5.7	□□□□□ -1.5
SPO11	YHL022C	FMP25	Q08023	583 aa		5.7	□□□□□ -1.5
SPO11	YHL022C	CCC2	P38995	1004 aa		5.69	□□□□□ -1.5
SPO11	YHL022C	ALR2	P43553	858 aa		5.69	□□□□□ -1.5
SPO11	YHL022C	CHA4	P43634	648 aa		5.69	□□□□□ -1.5
SPO11	YHL022C	ADE8	P04161	214 aa		5.68	□□□□□ -1.5
SPO11	YHL022C	STE11	P23561	717 aa		5.68	□□□□□ -1.5
SPO11	YHL022C	YKR078W	P36158	585 aa	Known RBP	5.68	□□□□□ -1.5
SPO11	YHL022C	NAN1	Q02931	896 aa	Known RBP	5.68	□□□□□ -1.5
SPO11	YHL022C	UBX5	Q06682	500 aa		5.68	□□□□□ -1.5
SPO11	YHL022C	PRP9	P19736	530 aa	Known RBP	5.67	□□□□□ -1.5
SPO11	YHL022C	CDC48	P25694	835 aa	Known RBP	5.67	□□□□□ -1.5
SPO11	YHL022C	RPL8B	P29453	256 aa	Known RBP	5.67	□□□□□ -1.5
SPO11	YHL022C	YBR284W	P38150	797 aa		5.67	□□□□□ -1.5
SPO11	YHL022C	SIT1	P39980	628 aa		5.67	□□□□□ -1.5
SPO11	YHL022C	PSP2	P50109	593 aa	Known RBP	5.67	□□□□□ -1.5
SPO11	YHL022C	PHO23	P50947	330 aa		5.67	□□□□□ -1.5
SPO11	YHL022C	RAD4	P14736	754 aa		5.66	□□□□□ -1.5
SPO11	YHL022C	HCM1	P25364	564 aa		5.66	□□□□□ -1.5
SPO11	YHL022C	YKE2	P52553	114 aa		5.66	□□□□□ -1.5
SPO11	YHL022C	BUL2	Q03758	920 aa	Known RBP	5.66	□□□□□ -1.5
SPO11	YHL022C	KCS1	Q12494	1050 aa		5.66	□□□□□ -1.5
SPO11	YHL022C	NOT3	P06102	836 aa	Known RBP	5.65	□□□□□ -1.5
SPO11	YHL022C	RPC82	P32349	654 aa		5.65	□□□□□ -1.5
SPO11	YHL022C	YBR238C	P38330	731 aa	Known RBP	5.65	□□□□□ -1.5
SPO11	YHL022C	TOK1	P40310	691 aa		5.65	□□□□□ -1.5
SPO11	YHL022C	RAI1	P53063	387 aa	Known RBP	5.65	□□□□□ -1.5
SPO11	YHL022C	UTP8	P53276	713 aa	Known RBP	5.65	□□□□□ -1.5
SPO11	YHL022C	TPO2	P53283	614 aa		5.65	□□□□□ -1.5
SPO11	YHL022C	EAF1	Q06337	982 aa		5.65	□□□□□ -1.5
SPO11	YHL022C	YPR071W	Q12346	211 aa		5.65	□□□□□ -1.5
SPO11	YHL022C	TUB2	P02557	457 aa	Known RBP	5.64	□□□□□ -1.51
SPO11	YHL022C	SPO75	Q07798	868 aa		5.64	□□□□□ -1.51
SPO11	YHL022C	NPC2	Q12408	173 aa		5.64	□□□□□ -1.51
SPO11	YHL022C	PMA1	P05030	918 aa	Known RBP	5.63	□□□□□ -1.51
SPO11	YHL022C	DCG1	P32460	244 aa		5.63	□□□□□ -1.51
SPO11	YHL022C	URM1	P40554	99 aa	Predicted RBP	5.63	□□□□□ -1.51
SPO11	YHL022C	EXG2	P52911	562 aa		5.63	□□□□□ -1.51
SPO11	YHL022C	NCS6	P53088	359 aa		5.63	□□□□□ -1.51
SPO11	YHL022C	LCD1	Q04377	747 aa		5.63	□□□□□ -1.51
SPO11	YHL022C	NTO1	Q12311	748 aa		5.63	□□□□□ -1.51
SPO11	YHL022C	HBN1	Q96VH4	193 aa		5.63	□□□□□ -1.51
SPO11	YHL022C	RPP2A	P05319	106 aa	Known RBP	5.62	□□□□□ -1.51
SPO11	YHL022C	ARE1	P25628	610 aa		5.62	□□□□□ -1.51
SPO11	YHL022C	TRM2	P33753	639 aa		5.62	□□□□□ -1.51
SPO11	YHL022C	TIM54	P47045	478 aa		5.62	□□□□□ -1.51
SPO11	YHL022C	ERP6	P53198	216 aa		5.62	□□□□□ -1.51
SPO11	YHL022C	SSL1	Q04673	461 aa	Predicted RBP	5.62	□□□□□ -1.51
SPO11	YHL022C	RPD3	P32561	433 aa		5.61	□□□□□ -1.51
SPO11	YHL022C	ATG19	P35193	415 aa		5.61	□□□□□ -1.51
SPO11	YHL022C	CCM1	P48237	864 aa	Predicted RBP	5.61	□□□□□ -1.51
SPO11	YHL022C	UPC2	Q12151	913 aa		5.61	□□□□□ -1.51
SPO11	YHL022C	OSH2	Q12451	1283 aa		5.61	□□□□□ -1.51
SPO11	YHL022C	TOP3	P13099	656 aa		5.6	□□□□□ -1.51
SPO11	YHL022C	MSD1	P15179	658 aa	Known RBP	5.6	□□□□□ -1.51
SPO11	YHL022C	CDC11	P32458	415 aa		5.6	□□□□□ -1.51
SPO11	YHL022C	REC104	P33323	182 aa		5.6	□□□□□ -1.51
SPO11	YHL022C	STE13	P33894	931 aa		5.6	□□□□□ -1.51
SPO11	YHL022C	YGR125W	P53273	1036 aa		5.6	□□□□□ -1.51
SPO11	YHL022C	GSF2	Q04697	403 aa	Known RBP	5.6	□□□□□ -1.51
SPO11	YHL022C	CIT1	P00890	479 aa		5.59	□□□□□ -1.51
SPO11	YHL022C	HSP60	P19882	572 aa	Known RBP	5.59	□□□□□ -1.51
SPO11	YHL022C	STE14	P32584	239 aa		5.59	□□□□□ -1.51
SPO11	YHL022C	PET10	P36139	283 aa		5.59	□□□□□ -1.51
SPO11	YHL022C	SUN4	P53616	420 aa		5.59	□□□□□ -1.51
SPO11	YHL022C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	5.59	□□□□□ -1.51	not detected
SPO11	YHL022C	LAS17	Q12446	633 aa		5.59	□□□□□ -1.51
SPO11	YHL022C	RFA1	P22336	621 aa	Known RBP	5.58	□□□□□ -1.52
SPO11	YHL022C	KAR4	P25583	335 aa		5.58	□□□□□ -1.52
SPO11	YHL022C	YHR020W	P38708	688 aa	Known RBP	5.58	□□□□□ -1.52
SPO11	YHL022C	HUL5	P53119	910 aa		5.58	□□□□□ -1.52
SPO11	YHL022C	HDA1	P53973	706 aa		5.58	□□□□□ -1.52
SPO11	YHL022C	PUS9	Q12069	462 aa		5.58	□□□□□ -1.52
SPO11	YHL022C	PFK1	P16861	987 aa	Known RBP	5.57	□□□□□ -1.52
SPO11	YHL022C	SED4	P25365	1065 aa		5.57	□□□□□ -1.52
SPO11	YHL022C	PMI40	P29952	429 aa	Known RBP	5.57	□□□□□ -1.52
SPO11	YHL022C	IOC3	P43596	787 aa		5.57	□□□□□ -1.52
SPO11	YHL022C	MSE1	P48525	536 aa		5.57	□□□□□ -1.52
SPO11	YHL022C	FLC1	Q08967	793 aa		5.57	□□□□□ -1.52

Retrieved 100 of 5,963 RNA–protein pairs in 161.6 ms