RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C CKA2P19454 339 aa14.75□□□□□ -0.05
SHU1YHL006C DBP5P20449 482 aaKnown RBP14.75□□□□□ -0.05
SHU1YHL006C PRX1P34227 261 aaKnown RBP14.75□□□□□ -0.05
SHU1YHL006C APN2P38207 520 aa14.75□□□□□ -0.05
SHU1YHL006C FAF1P40546 346 aaPredicted RBP14.75□□□□□ -0.05
SHU1YHL006C YNL146WP53906 100 aa14.75□□□□□ -0.05
SHU1YHL006C YLR422WQ06409 1932 aa14.74□□□□□ -0.05
SHU1YHL006C POL3P15436 1097 aa14.74□□□□□ -0.05
SHU1YHL006C PFK1P16861 987 aaKnown RBP14.74□□□□□ -0.05
SHU1YHL006C ADK2P26364 225 aa14.74□□□□□ -0.05
SHU1YHL006C COT1P32798 439 aa14.74□□□□□ -0.05
SHU1YHL006C BUD16P39988 312 aa14.74□□□□□ -0.05
SHU1YHL006C NUP82P40368 713 aa14.74□□□□□ -0.05
SHU1YHL006C ESL1P40456 1118 aa14.74□□□□□ -0.05
SHU1YHL006C GUP1P53154 560 aa14.74□□□□□ -0.05
SHU1YHL006C MNP1P53163 194 aaPredicted RBP14.74□□□□□ -0.05
SHU1YHL006C FAR11P53917 953 aa14.74□□□□□ -0.05
SHU1YHL006C DAP1Q12091 152 aa14.74□□□□□ -0.05
SHU1YHL006C RGP1P16664 663 aa14.73□□□□□ -0.05
SHU1YHL006C RAM2P29703 316 aa14.73□□□□□ -0.05
SHU1YHL006C DPH2P32461 534 aa14.73□□□□□ -0.05
SHU1YHL006C STB5P38699 743 aa14.73□□□□□ -0.05
SHU1YHL006C THI6P41835 540 aa14.73□□□□□ -0.05
SHU1YHL006C LAM5P43560 674 aa14.73□□□□□ -0.05
SHU1YHL006C YGL081WP53156 320 aa14.73□□□□□ -0.05
SHU1YHL006C CAF130P53280 1122 aaPredicted RBP14.73□□□□□ -0.05
SHU1YHL006C GLN3P18494 730 aa14.72□□□□□ -0.05
SHU1YHL006C ISY1P21374 235 aaPredicted RBP14.72□□□□□ -0.05
SHU1YHL006C CSE2P33308 149 aa14.72□□□□□ -0.05
SHU1YHL006C RFS1P38234 210 aaKnown RBP14.72□□□□□ -0.05
SHU1YHL006C DAK2P43550 591 aa14.72□□□□□ -0.05
SHU1YHL006C ALT2P52892 507 aa14.72□□□□□ -0.05
SHU1YHL006C COX4P04037 155 aa14.71□□□□□ -0.05
SHU1YHL006C HXK1P04806 485 aaKnown RBP14.71□□□□□ -0.05
SHU1YHL006C MCM3P24279 971 aaKnown RBP14.71□□□□□ -0.05
SHU1YHL006C RDS1P25611 832 aa14.71□□□□□ -0.05
SHU1YHL006C YFL052WP43551 465 aa14.71□□□□□ -0.05
SHU1YHL006C YDR090CQ03193 310 aa14.71□□□□□ -0.05
SHU1YHL006C OSW2Q12202 724 aa14.71□□□□□ -0.05
SHU1YHL006C YOR022CQ12204 715 aa14.71□□□□□ -0.05
SHU1YHL006C ENV11P53246 860 aa14.7□□□□□ -0.06
SHU1YHL006C SPO71Q03868 1245 aa14.7□□□□□ -0.06
SHU1YHL006C ZPS1Q12512 249 aa14.7□□□□□ -0.06
SHU1YHL006C FOB1O13329 566 aa14.69□□□□□ -0.06
SHU1YHL006C TOM70P07213 617 aaKnown RBP14.69□□□□□ -0.06
SHU1YHL006C MRPL7P36519 292 aa14.69□□□□□ -0.06
SHU1YHL006C VID24P38263 362 aa14.69□□□□□ -0.06
SHU1YHL006C OYE3P41816 400 aaPredicted RBP14.69□□□□□ -0.06
SHU1YHL006C YDL057WQ07379 328 aa14.69□□□□□ -0.06
SHU1YHL006C HIS4P00815 799 aaKnown RBP14.68□□□□□ -0.06
SHU1YHL006C NAM7P30771 971 aaKnown RBP14.68□□□□□ -0.06
SHU1YHL006C SYN8P31377 255 aa14.68□□□□□ -0.06
SHU1YHL006C CUL3P53202 744 aa14.68□□□□□ -0.06
SHU1YHL006C TAM41P53230 385 aa14.68□□□□□ -0.06
SHU1YHL006C TOF1P53840 1238 aa14.68□□□□□ -0.06
SHU1YHL006C SPP1Q03012 353 aa14.68□□□□□ -0.06
SHU1YHL006C COG8Q04632 607 aa14.68□□□□□ -0.06
SHU1YHL006C RPC53P25441 422 aa14.67□□□□□ -0.06
SHU1YHL006C RPT1P33299 467 aaKnown RBP14.67□□□□□ -0.06
SHU1YHL006C MRX3P38172 270 aa14.67□□□□□ -0.06
SHU1YHL006C PEX14P53112 341 aa14.67□□□□□ -0.06
SHU1YHL006C ECM7Q06200 448 aa14.67□□□□□ -0.06
SHU1YHL006C PPS1P38148 807 aa14.66□□□□□ -0.06
SHU1YHL006C SCP160P06105 1222 aaKnown RBP RIP-Chip data14.65□□□□□ -0.06not detected
SHU1YHL006C MBR1P23493 339 aa14.65□□□□□ -0.06
SHU1YHL006C RSA4P25382 515 aaKnown RBP14.65□□□□□ -0.06
SHU1YHL006C YSC83P32792 385 aa14.65□□□□□ -0.06
SHU1YHL006C YHR202WP38887 602 aa14.65□□□□□ -0.06
SHU1YHL006C SEC21P32074 935 aaKnown RBP14.64□□□□□ -0.07
SHU1YHL006C SKG6P32900 734 aaPredicted RBP14.64□□□□□ -0.07
SHU1YHL006C GCS1P35197 352 aa14.64□□□□□ -0.07
SHU1YHL006C MNN4P36044 1178 aa14.64□□□□□ -0.07
SHU1YHL006C RDH54P38086 958 aa14.64□□□□□ -0.07
SHU1YHL006C XDJ1P39102 459 aa14.64□□□□□ -0.07
SHU1YHL006C YIR014WP40570 242 aa14.64□□□□□ -0.07
SHU1YHL006C CUE3P53137 624 aaKnown RBP14.64□□□□□ -0.07
SHU1YHL006C YNR014WP53719 212 aa14.64□□□□□ -0.07
SHU1YHL006C VTC3Q02725 835 aa14.64□□□□□ -0.07
SHU1YHL006C TRS130Q03660 1102 aa14.64□□□□□ -0.07
SHU1YHL006C LCD1Q04377 747 aa14.64□□□□□ -0.07
SHU1YHL006C BIK1P11709 440 aa14.63□□□□□ -0.07
SHU1YHL006C SSD1P24276 1250 aaKnown RBP RIP-Chip data14.63□□□□□ -0.07not detected
SHU1YHL006C VPS35P34110 944 aa14.63□□□□□ -0.07
SHU1YHL006C APM2P38700 605 aa14.63□□□□□ -0.07
SHU1YHL006C PSR2Q07949 397 aa14.63□□□□□ -0.07
SHU1YHL006C YEL1P34225 687 aa14.62□□□□□ -0.07
SHU1YHL006C CCL1P37366 393 aa14.62□□□□□ -0.07
SHU1YHL006C UBP13P38187 747 aa14.62□□□□□ -0.07
SHU1YHL006C YER186CP40101 306 aa14.62□□□□□ -0.07
SHU1YHL006C ORC5P50874 479 aa14.62□□□□□ -0.07
SHU1YHL006C PKH2Q12236 1081 aaKnown RBP14.62□□□□□ -0.07
SHU1YHL006C BIO2P32451 375 aa14.61□□□□□ -0.07
SHU1YHL006C VTC2P43585 828 aa14.61□□□□□ -0.07
SHU1YHL006C ISM1P48526 1002 aa14.61□□□□□ -0.07
SHU1YHL006C SEC5P89102 971 aa14.61□□□□□ -0.07
SHU1YHL006C CUR1Q06469 252 aa14.61□□□□□ -0.07
SHU1YHL006C PCK1P10963 549 aa14.6□□□□□ -0.07
SHU1YHL006C HEL1P36113 551 aa14.6□□□□□ -0.07
SHU1YHL006C YIR016WP40572 265 aa14.6□□□□□ -0.07
SHU1YHL006C HRQ1Q05549 1077 aa14.6□□□□□ -0.07
Retrieved 100 of 5,963 RNA–protein pairs in 148.5 ms