RNA–Protein interactions for RNA: YFR023W

PES4, Transcript of Poly(A) binding protein, suppressor of DNA polymerase epsilon mutation, yeast

Gene PES4, Length 1,836 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PES4	YFR023W	OMS1	Q06668	471 aa		4.2	□□□□□ -1.74
PES4	YFR023W	YPL066W	Q12194	479 aa		4.2	□□□□□ -1.74
PES4	YFR023W	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.19	□□□□□ -1.74	not detected
PES4	YFR023W	MNR2	P35724	969 aa		4.19	□□□□□ -1.74
PES4	YFR023W	YGL176C	P46945	554 aa		4.19	□□□□□ -1.74
PES4	YFR023W	TIM44	Q01852	431 aa		4.19	□□□□□ -1.74
PES4	YFR023W	EEB1	Q02891	456 aa		4.19	□□□□□ -1.74
PES4	YFR023W	HRQ1	Q05549	1077 aa		4.19	□□□□□ -1.74
PES4	YFR023W	PET112	P33893	541 aa		4.18	□□□□□ -1.74
PES4	YFR023W	YOL073C	Q08232	322 aa		4.18	□□□□□ -1.74
PES4	YFR023W	KAR4	P25583	335 aa		4.18	□□□□□ -1.74
PES4	YFR023W	HEM3	P28789	327 aa		4.18	□□□□□ -1.74
PES4	YFR023W	YKL151C	P36059	337 aa		4.18	□□□□□ -1.74
PES4	YFR023W	GIC1	P38785	314 aa		4.18	□□□□□ -1.74
PES4	YFR023W	SRP1	Q02821	542 aa	Known RBP	4.18	□□□□□ -1.74
PES4	YFR023W	MOT2	P34909	587 aa	Known RBP	4.17	□□□□□ -1.74
PES4	YFR023W	QRI1	P43123	477 aa	Known RBP	4.17	□□□□□ -1.74
PES4	YFR023W	YLR040C	Q07988	224 aa		4.17	□□□□□ -1.74
PES4	YFR023W	MCH5	Q08777	521 aa		4.17	□□□□□ -1.74
PES4	YFR023W	TRP4	P07285	380 aa	Predicted RBP	4.16	□□□□□ -1.74
PES4	YFR023W	SUL1	P38359	859 aa		4.16	□□□□□ -1.74
PES4	YFR023W	BUL1	P48524	976 aa		4.16	□□□□□ -1.74
PES4	YFR023W	LAS17	Q12446	633 aa		4.16	□□□□□ -1.74
PES4	YFR023W	SAH1	P39954	449 aa	Known RBP	4.16	□□□□□ -1.74
PES4	YFR023W	ACF2	Q12168	779 aa		4.16	□□□□□ -1.74
PES4	YFR023W	ERG4	P25340	473 aa		4.15	□□□□□ -1.75
PES4	YFR023W	YKR078W	P36158	585 aa	Known RBP	4.14	□□□□□ -1.75
PES4	YFR023W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
PES4	YFR023W	RNT1	Q02555	471 aa		4.14	□□□□□ -1.75
PES4	YFR023W	UPC2	Q12151	913 aa		4.14	□□□□□ -1.75
PES4	YFR023W	CAD1	P24813	409 aa	Known RBP	4.14	□□□□□ -1.75
PES4	YFR023W	ATF1	P40353	525 aa		4.14	□□□□□ -1.75
PES4	YFR023W	TMN2	Q04562	672 aa		4.14	□□□□□ -1.75
PES4	YFR023W	SED4	P25365	1065 aa		4.13	□□□□□ -1.75
PES4	YFR023W	CDC12	P32468	407 aa	Known RBP	4.13	□□□□□ -1.75
PES4	YFR023W	YLR225C	Q05948	407 aa	Known RBP	4.13	□□□□□ -1.75
PES4	YFR023W	GYP7	P48365	746 aa		4.12	□□□□□ -1.75
PES4	YFR023W	YGR053C	P53234	283 aa		4.12	□□□□□ -1.75
PES4	YFR023W	RAI1	P53063	387 aa	Known RBP	4.11	□□□□□ -1.75
PES4	YFR023W	BDF2	Q07442	638 aa		4.11	□□□□□ -1.75
PES4	YFR023W	WHI4	Q07655	649 aa	Known RBP	4.11	□□□□□ -1.75
PES4	YFR023W	IRC10	Q08118	586 aa		4.11	□□□□□ -1.75
PES4	YFR023W	STB4	P50104	949 aa		4.11	□□□□□ -1.75
PES4	YFR023W	PPR1	P07272	904 aa	Predicted RBP	4.1	□□□□□ -1.75
PES4	YFR023W	SBA1	P28707	216 aa	Known RBP	4.1	□□□□□ -1.75
PES4	YFR023W	YER158C	P40095	573 aa		4.1	□□□□□ -1.75
PES4	YFR023W	OYE2	Q03558	400 aa	Known RBP	4.1	□□□□□ -1.75
PES4	YFR023W	YPR196W	Q06595	470 aa		4.1	□□□□□ -1.75
PES4	YFR023W	NAP1	P25293	417 aa	Known RBP	4.09	□□□□□ -1.75
PES4	YFR023W	STE14	P32584	239 aa		4.09	□□□□□ -1.75
PES4	YFR023W	CUE2	P36075	443 aa	Known RBP	4.09	□□□□□ -1.75
PES4	YFR023W	SFB2	P53953	876 aa		4.09	□□□□□ -1.75
PES4	YFR023W	AGP1	P25376	633 aa		4.09	□□□□□ -1.76
PES4	YFR023W	SCT1	P32784	759 aa		4.09	□□□□□ -1.76
PES4	YFR023W	YBR238C	P38330	731 aa	Known RBP	4.09	□□□□□ -1.76
PES4	YFR023W	NPP2	P39997	493 aa		4.09	□□□□□ -1.76
PES4	YFR023W	CDC48	P25694	835 aa	Known RBP	4.08	□□□□□ -1.76
PES4	YFR023W	VPS30	Q02948	557 aa		4.08	□□□□□ -1.76
PES4	YFR023W	DUS3	Q06053	668 aa	Known RBP	4.08	□□□□□ -1.76
PES4	YFR023W	ALG7	P07286	448 aa		4.07	□□□□□ -1.76
PES4	YFR023W	HBT1	Q07653	1046 aa	Known RBP	4.07	□□□□□ -1.76
PES4	YFR023W	SNM1	P40993	198 aa		4.07	□□□□□ -1.76
PES4	YFR023W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
PES4	YFR023W	DAS1	P47005	663 aa		4.07	□□□□□ -1.76
PES4	YFR023W	NOP8	Q08287	484 aa	Predicted RBP	4.07	□□□□□ -1.76
PES4	YFR023W	CLN2	P20438	545 aa		4.06	□□□□□ -1.76
PES4	YFR023W	ABD1	P32783	436 aa	Predicted RBP	4.06	□□□□□ -1.76
PES4	YFR023W	TSL1	P38427	1098 aa	Known RBP	4.06	□□□□□ -1.76
PES4	YFR023W	YKE2	P52553	114 aa		4.06	□□□□□ -1.76
PES4	YFR023W	PEX19	Q07418	342 aa		4.06	□□□□□ -1.76
PES4	YFR023W	MET3	P08536	511 aa		4.05	□□□□□ -1.76
PES4	YFR023W	MTH1	P35198	433 aa		4.05	□□□□□ -1.76
PES4	YFR023W	ERG5	P54781	538 aa		4.05	□□□□□ -1.76
PES4	YFR023W	YML020W	Q03722	664 aa		4.05	□□□□□ -1.76
PES4	YFR023W	NDJ1	Q12366	352 aa		4.05	□□□□□ -1.76
PES4	YFR023W	NOT3	P06102	836 aa	Known RBP	4.05	□□□□□ -1.76
PES4	YFR023W	STE13	P33894	931 aa		4.05	□□□□□ -1.76
PES4	YFR023W	FAA4	P47912	694 aa	Known RBP	4.05	□□□□□ -1.76
PES4	YFR023W	TPO2	P53283	614 aa		4.05	□□□□□ -1.76
PES4	YFR023W	VPS16	Q03308	798 aa		4.05	□□□□□ -1.76
PES4	YFR023W	YMR206W	Q03695	313 aa		4.05	□□□□□ -1.76
PES4	YFR023W	SHE9	Q04172	456 aa		4.05	□□□□□ -1.76
PES4	YFR023W	ESC2	Q06340	456 aa		4.05	□□□□□ -1.76
PES4	YFR023W	TRM11	Q12463	433 aa		4.05	□□□□□ -1.76
PES4	YFR023W	FBP1	P09201	348 aa		4.04	□□□□□ -1.76
PES4	YFR023W	CTF13	P35203	478 aa		4.04	□□□□□ -1.76
PES4	YFR023W	SPC42	P36094	363 aa		4.04	□□□□□ -1.76
PES4	YFR023W	YHL017W	P38745	532 aa		4.04	□□□□□ -1.76
PES4	YFR023W	SDP1	P40479	209 aa		4.04	□□□□□ -1.76
PES4	YFR023W	SLU7	Q02775	382 aa	Known RBP	4.04	□□□□□ -1.76
PES4	YFR023W	GDE1	Q02979	1223 aa		4.04	□□□□□ -1.76
PES4	YFR023W	ADE8	P04161	214 aa		4.03	□□□□□ -1.76
PES4	YFR023W	MBP1	P39678	833 aa		4.03	□□□□□ -1.76
PES4	YFR023W	GND2	P53319	492 aa		4.03	□□□□□ -1.76
PES4	YFR023W	DLT1	Q04216	342 aa		4.03	□□□□□ -1.76
PES4	YFR023W	FAL1	Q12099	399 aa	Known RBP	4.03	□□□□□ -1.76
PES4	YFR023W	SEC21	P32074	935 aa	Known RBP	4.02	□□□□□ -1.77
PES4	YFR023W	PPH3	P32345	308 aa		4.02	□□□□□ -1.77
PES4	YFR023W	SDS3	P40505	327 aa		4.02	□□□□□ -1.77
PES4	YFR023W	LGE1	Q02796	332 aa	Known RBP	4.02	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 19.3 ms