RNA–Protein interactions for RNA: YEL013W

VAC8, Transcript of Phosphorylated and palmitoylated vacuolar membrane protein, yeast

Gene VAC8, Length 1,737 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VAC8	YEL013W	MAG2	Q06436	670 aa	Known RBP	4.15	□□□□□ -1.75
VAC8	YEL013W	TAO3	P40468	2376 aa		4.14	□□□□□ -1.75
VAC8	YEL013W	LEU2	P04173	364 aa	Predicted RBP	4.14	□□□□□ -1.75
VAC8	YEL013W	CLN2	P20438	545 aa		4.14	□□□□□ -1.75
VAC8	YEL013W	ESL2	P36168	1195 aa		4.14	□□□□□ -1.75
VAC8	YEL013W	YHL012W	P38709	493 aa		4.14	□□□□□ -1.75
VAC8	YEL013W	SHC1	P39000	512 aa		4.14	□□□□□ -1.75
VAC8	YEL013W	PEX7	P39108	375 aa		4.14	□□□□□ -1.75
VAC8	YEL013W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.14	□□□□□ -1.75	not detected
VAC8	YEL013W	SSY1	Q03770	852 aa		4.14	□□□□□ -1.75
VAC8	YEL013W	RPS24A	P0CX31	135 aa	Known RBP	4.13	□□□□□ -1.75
VAC8	YEL013W	RPS24B	P0CX32	135 aa	Known RBP	4.13	□□□□□ -1.75
VAC8	YEL013W	GRX1	P25373	110 aa	Known RBP	4.13	□□□□□ -1.75
VAC8	YEL013W	MLS1	P30952	554 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	YSC84	P32793	468 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	MAL31	P38156	614 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	PFF1	P38244	976 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	PTC7	P38797	343 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	GPB2	P39717	880 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	CNN1	P43618	361 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	NCS6	P53088	359 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	YPL260W	Q08977	551 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	RIM15	P43565	1770 aa		4.13	□□□□□ -1.75
VAC8	YEL013W	MDL2	P33311	773 aa		4.12	□□□□□ -1.75
VAC8	YEL013W	GTS1	P40956	396 aa		4.12	□□□□□ -1.75
VAC8	YEL013W	TYW3	P53177	273 aa		4.12	□□□□□ -1.75
VAC8	YEL013W	HOS3	Q02959	697 aa	Known RBP	4.12	□□□□□ -1.75
VAC8	YEL013W	GDE1	Q02979	1223 aa		4.12	□□□□□ -1.75
VAC8	YEL013W	SPO21	Q12411	609 aa		4.12	□□□□□ -1.75
VAC8	YEL013W	SAM35	P14693	329 aa		4.12	□□□□□ -1.75
VAC8	YEL013W	DUT1	P33317	147 aa		4.12	□□□□□ -1.75
VAC8	YEL013W	MCM7	P38132	845 aa		4.12	□□□□□ -1.75
VAC8	YEL013W	RGD1	P38339	666 aa		4.12	□□□□□ -1.75
VAC8	YEL013W	NOP7	P53261	605 aa	Known RBP	4.12	□□□□□ -1.75
VAC8	YEL013W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
VAC8	YEL013W	DBP5	P20449	482 aa	Known RBP	4.11	□□□□□ -1.75
VAC8	YEL013W	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
VAC8	YEL013W	TIF35	Q04067	274 aa	Known RBP	4.11	□□□□□ -1.75
VAC8	YEL013W	NBA1	Q08229	501 aa	Known RBP	4.11	□□□□□ -1.75
VAC8	YEL013W	PIN2	Q12057	282 aa		4.11	□□□□□ -1.75
VAC8	YEL013W	COQ4	O13525	335 aa		4.1	□□□□□ -1.75
VAC8	YEL013W	TRP2	P00899	507 aa	Known RBP	4.1	□□□□□ -1.75
VAC8	YEL013W	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.1	□□□□□ -1.75	not detected
VAC8	YEL013W	SRO9	P25567	434 aa	Known RBP	4.1	□□□□□ -1.75
VAC8	YEL013W	SMY1	P32364	656 aa	Known RBP	4.1	□□□□□ -1.75
VAC8	YEL013W	AIM26	P32858	118 aa		4.1	□□□□□ -1.75
VAC8	YEL013W	HSP78	P33416	811 aa		4.1	□□□□□ -1.75
VAC8	YEL013W	PAM1	P37304	830 aa	Known RBP	4.1	□□□□□ -1.75
VAC8	YEL013W	YGR053C	P53234	283 aa		4.1	□□□□□ -1.75
VAC8	YEL013W	YVH1	Q02256	364 aa	Known RBP	4.1	□□□□□ -1.75
VAC8	YEL013W	VPS16	Q03308	798 aa		4.1	□□□□□ -1.75
VAC8	YEL013W	AOS1	Q06624	347 aa		4.1	□□□□□ -1.75
VAC8	YEL013W	ATG13	Q06628	738 aa		4.1	□□□□□ -1.75
VAC8	YEL013W	YLL067C	Q07888	1374 aa		4.1	□□□□□ -1.75
VAC8	YEL013W	TOP1	P04786	769 aa		4.09	□□□□□ -1.75
VAC8	YEL013W	LYP1	P32487	611 aa		4.09	□□□□□ -1.75
VAC8	YEL013W	SEA4	P38164	1038 aa		4.09	□□□□□ -1.75
VAC8	YEL013W	VAC8	P39968	578 aa		4.09	□□□□□ -1.75
VAC8	YEL013W	FAA4	P47912	694 aa	Known RBP	4.09	□□□□□ -1.75
VAC8	YEL013W	FOL2	P51601	243 aa	Known RBP	4.09	□□□□□ -1.75
VAC8	YEL013W	TNA1	P53322	534 aa		4.09	□□□□□ -1.75
VAC8	YEL013W	EEB1	Q02891	456 aa		4.09	□□□□□ -1.75
VAC8	YEL013W	SPO20	Q04359	397 aa		4.09	□□□□□ -1.75
VAC8	YEL013W	RSB1	Q08417	382 aa		4.09	□□□□□ -1.75
VAC8	YEL013W	TOR1	P35169	2470 aa		4.09	□□□□□ -1.75
VAC8	YEL013W	YER152C	P10356	443 aa		4.09	□□□□□ -1.76
VAC8	YEL013W	MOT2	P34909	587 aa	Known RBP	4.09	□□□□□ -1.76
VAC8	YEL013W	POL12	P38121	705 aa	Predicted RBP	4.09	□□□□□ -1.76
VAC8	YEL013W	CCZ1	P38273	704 aa		4.09	□□□□□ -1.76
VAC8	YEL013W	MPH1	P40562	993 aa		4.09	□□□□□ -1.76
VAC8	YEL013W	HNT2	P49775	206 aa		4.09	□□□□□ -1.76
VAC8	YEL013W	ERO1	Q03103	563 aa		4.09	□□□□□ -1.76
VAC8	YEL013W	YLR225C	Q05948	407 aa	Known RBP	4.09	□□□□□ -1.76
VAC8	YEL013W	RSC58	Q07979	502 aa		4.09	□□□□□ -1.76
VAC8	YEL013W	RCL1	Q08096	367 aa	Predicted RBP	4.09	□□□□□ -1.76
VAC8	YEL013W	OSM1	P21375	501 aa	Known RBP	4.08	□□□□□ -1.76
VAC8	YEL013W	ICL1	P28240	557 aa	Predicted RBP	4.08	□□□□□ -1.76
VAC8	YEL013W	RPN3	P40016	523 aa	Known RBP	4.08	□□□□□ -1.76
VAC8	YEL013W	PEA2	P40091	420 aa		4.08	□□□□□ -1.76
VAC8	YEL013W	NUM1	Q00402	2748 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	INO1	P11986	533 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	YKU70	P32807	602 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	ALD6	P54115	500 aa	Known RBP	4.07	□□□□□ -1.76
VAC8	YEL013W	GNT1	Q12096	491 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	FAL1	Q12099	399 aa	Known RBP	4.07	□□□□□ -1.76
VAC8	YEL013W	SPS1	P08458	490 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	BAS1	P22035	811 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	LRG1	P35688	1017 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	BAP2	P38084	609 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	KRI1	P42846	591 aa	Known RBP	4.07	□□□□□ -1.76
VAC8	YEL013W	YGL176C	P46945	554 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	ORC3	P54790	616 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	SPP382	Q06411	708 aa	Predicted RBP	4.07	□□□□□ -1.76
VAC8	YEL013W	LPX1	Q12405	387 aa	Known RBP	4.07	□□□□□ -1.76
VAC8	YEL013W	DFG16	Q99234	619 aa		4.07	□□□□□ -1.76
VAC8	YEL013W	PRI2	P20457	528 aa		4.06	□□□□□ -1.76
VAC8	YEL013W	PIK1	P39104	1066 aa		4.06	□□□□□ -1.76
VAC8	YEL013W	SNF7	P39929	240 aa	Known RBP	4.06	□□□□□ -1.76
VAC8	YEL013W	MXR1	P40029	184 aa		4.06	□□□□□ -1.76
VAC8	YEL013W	AVT1	P47082	602 aa		4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 188.8 ms