RNA–Protein interactions for RNA: YDR404C

RPB7, Transcript of RNA polymerase II subunit B16, yeastyeast

Gene RPB7, Length 516 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB7YDR404C RKM4Q12504 494 aa5.95□□□□□ -1.46
RPB7YDR404C GCD1P09032 578 aaPredicted RBP5.94□□□□□ -1.46
RPB7YDR404C TSR4P25040 408 aa5.94□□□□□ -1.46
RPB7YDR404C AFG2P32794 780 aa5.94□□□□□ -1.46
RPB7YDR404C PIN4P34217 668 aaKnown RBP RIP-Chip data5.94□□□□□ -1.46not detected
RPB7YDR404C YKL107WP34251 309 aa5.94□□□□□ -1.46
RPB7YDR404C MCM7P38132 845 aa5.94□□□□□ -1.46
RPB7YDR404C YAR028WP39548 234 aa5.94□□□□□ -1.46
RPB7YDR404C MBP1P39678 833 aa5.94□□□□□ -1.46
RPB7YDR404C CNN1P43618 361 aa5.94□□□□□ -1.46
RPB7YDR404C ALT1P52893 592 aa5.94□□□□□ -1.46
RPB7YDR404C UBX5Q06682 500 aa5.94□□□□□ -1.46
RPB7YDR404C YGR161W-CQ3E744 92 aa5.94□□□□□ -1.46
RPB7YDR404C IML1P47170 1584 aa5.93□□□□□ -1.46
RPB7YDR404C ALR2P43553 858 aa5.93□□□□□ -1.46
RPB7YDR404C RTA1P53047 317 aa5.93□□□□□ -1.46
RPB7YDR404C YNR063WP53749 607 aa5.93□□□□□ -1.46
RPB7YDR404C RKM2Q03942 479 aa5.93□□□□□ -1.46
RPB7YDR404C UTP14Q04500 899 aaKnown RBP5.93□□□□□ -1.46
RPB7YDR404C NUP188P52593 1655 aaKnown RBP5.93□□□□□ -1.46
RPB7YDR404C YBT1P32386 1661 aa5.92□□□□□ -1.46
RPB7YDR404C TY1B-NL2Q99337 1749 aaKnown RBP5.92□□□□□ -1.46
RPB7YDR404C MPH1P40562 993 aa5.92□□□□□ -1.46
RPB7YDR404C HUL4P40985 892 aa5.92□□□□□ -1.46
RPB7YDR404C AVT1P47082 602 aa5.92□□□□□ -1.46
RPB7YDR404C TAF8Q03750 510 aa5.92□□□□□ -1.46
RPB7YDR404C TPP1Q03796 238 aa5.91□□□□□ -1.46
RPB7YDR404C PRP9P19736 530 aaKnown RBP5.9□□□□□ -1.46
RPB7YDR404C MLS1P30952 554 aa5.9□□□□□ -1.46
RPB7YDR404C BET3P36149 193 aa5.9□□□□□ -1.46
RPB7YDR404C ALG3P38179 458 aa5.9□□□□□ -1.46
RPB7YDR404C SNF7P39929 240 aaKnown RBP5.9□□□□□ -1.46
RPB7YDR404C OYE3P41816 400 aaPredicted RBP5.9□□□□□ -1.46
RPB7YDR404C HNT2P49775 206 aa5.9□□□□□ -1.46
RPB7YDR404C DNM1P54861 757 aa5.9□□□□□ -1.46
RPB7YDR404C EAR1Q03212 550 aa5.9□□□□□ -1.46
RPB7YDR404C TRE1Q08919 783 aa5.9□□□□□ -1.46
RPB7YDR404C PTC5Q12511 572 aa5.9□□□□□ -1.46
RPB7YDR404C HAP1P0CE41 1502 aa5.89□□□□□ -1.47
RPB7YDR404C ADP1P25371 1049 aa5.89□□□□□ -1.47
RPB7YDR404C MSH2P25847 964 aa5.89□□□□□ -1.47
RPB7YDR404C RGD1P38339 666 aa5.89□□□□□ -1.47
RPB7YDR404C SIP5P40210 489 aaKnown RBP5.89□□□□□ -1.47
RPB7YDR404C YDL124WQ07551 312 aaKnown RBP5.89□□□□□ -1.47
RPB7YDR404C PUS7Q08647 676 aaKnown RBP5.89□□□□□ -1.47
RPB7YDR404C HRK1Q08732 759 aaKnown RBP5.89□□□□□ -1.47
RPB7YDR404C YVC1Q12324 675 aa5.89□□□□□ -1.47
RPB7YDR404C RET1P22276 1149 aaKnown RBP5.88□□□□□ -1.47
RPB7YDR404C GRX4P32642 244 aa5.88□□□□□ -1.47
RPB7YDR404C POL12P38121 705 aaPredicted RBP5.88□□□□□ -1.47
RPB7YDR404C IRC24P40580 263 aa5.88□□□□□ -1.47
RPB7YDR404C YGL081WP53156 320 aa5.88□□□□□ -1.47
RPB7YDR404C YLR257WQ06146 321 aaKnown RBP5.88□□□□□ -1.47
RPB7YDR404C NTG2Q08214 380 aa5.88□□□□□ -1.47
RPB7YDR404C NOP14Q99207 810 aaKnown RBP5.88□□□□□ -1.47
RPB7YDR404C SRM1P21827 482 aa5.87□□□□□ -1.47
RPB7YDR404C PRO1P32264 428 aa5.87□□□□□ -1.47
RPB7YDR404C HBS1P32769 611 aaKnown RBP5.87□□□□□ -1.47
RPB7YDR404C NPL3Q01560 414 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47not detected
RPB7YDR404C GNT1Q12096 491 aa5.87□□□□□ -1.47
RPB7YDR404C HBN1Q96VH4 193 aa5.87□□□□□ -1.47
RPB7YDR404C TOM20P35180 183 aa5.86□□□□□ -1.47
RPB7YDR404C NMD3P38861 518 aaKnown RBP5.86□□□□□ -1.47
RPB7YDR404C CCC2P38995 1004 aa5.86□□□□□ -1.47
RPB7YDR404C UBP12P39538 1254 aa5.86□□□□□ -1.47
RPB7YDR404C RSA3Q05942 220 aaKnown RBP5.86□□□□□ -1.47
RPB7YDR404C SSB1P11484 613 aaKnown RBP5.85□□□□□ -1.47
RPB7YDR404C HSP78P33416 811 aa5.85□□□□□ -1.47
RPB7YDR404C GDH3P39708 457 aa5.85□□□□□ -1.47
RPB7YDR404C SSB2P40150 613 aaKnown RBP5.85□□□□□ -1.47
RPB7YDR404C VPS53P47061 822 aa5.85□□□□□ -1.47
RPB7YDR404C ECL1P48235 211 aa5.85□□□□□ -1.47
RPB7YDR404C HSV2P50079 448 aaPredicted RBP5.85□□□□□ -1.47
RPB7YDR404C SSY1Q03770 852 aa5.85□□□□□ -1.47
RPB7YDR404C ADR1P07248 1323 aa5.84□□□□□ -1.47
RPB7YDR404C TOP3P13099 656 aa5.84□□□□□ -1.47
RPB7YDR404C YBR284WP38150 797 aa5.84□□□□□ -1.47
RPB7YDR404C YHL012WP38709 493 aa5.84□□□□□ -1.47
RPB7YDR404C QNS1P38795 714 aaKnown RBP5.84□□□□□ -1.47
RPB7YDR404C PTC7P38797 343 aa5.84□□□□□ -1.47
RPB7YDR404C CRP1P38845 465 aaKnown RBP5.84□□□□□ -1.47
RPB7YDR404C MAL11P53048 616 aa5.84□□□□□ -1.47
RPB7YDR404C SPP382Q06411 708 aaPredicted RBP5.84□□□□□ -1.47
RPB7YDR404C YDR306CQ06640 478 aa5.84□□□□□ -1.47
RPB7YDR404C DFG16Q99234 619 aa5.84□□□□□ -1.47
RPB7YDR404C YER152CP10356 443 aa5.83□□□□□ -1.48
RPB7YDR404C RPL8AP17076 256 aaKnown RBP5.83□□□□□ -1.48
RPB7YDR404C CDC11P32458 415 aa5.83□□□□□ -1.48
RPB7YDR404C PNT1P38969 423 aa5.83□□□□□ -1.48
RPB7YDR404C PEX7P39108 375 aa5.83□□□□□ -1.48
RPB7YDR404C YEN1P40028 759 aa5.83□□□□□ -1.48
RPB7YDR404C GTS1P40956 396 aa5.83□□□□□ -1.48
RPB7YDR404C GUS1P46655 708 aaKnown RBP RIP-Chip data5.83□□□□□ -1.48not detected
RPB7YDR404C UGO1Q03327 502 aa5.83□□□□□ -1.48
RPB7YDR404C VMR1P38735 1592 aa5.83□□□□□ -1.48
RPB7YDR404C TOM70P07213 617 aaKnown RBP5.82□□□□□ -1.48
RPB7YDR404C KIP1P28742 1111 aa5.82□□□□□ -1.48
RPB7YDR404C PEX6P33760 1030 aa5.82□□□□□ -1.48
RPB7YDR404C ZDS1P50111 915 aaKnown RBP5.82□□□□□ -1.48
RPB7YDR404C YPL260WQ08977 551 aa5.82□□□□□ -1.48
Retrieved 100 of 5,963 RNA–protein pairs in 172.5 ms