RNA–Protein interactions for RNA: YDR288W

NSE3, Transcript of Component of the SMC5-SMC6 complex, yeast

Gene NSE3, Length 912 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NSE3	YDR288W	CDC48	P25694	835 aa	Known RBP	6.29	□□□□□ -1.4
NSE3	YDR288W	GIC1	P38785	314 aa		6.29	□□□□□ -1.4
NSE3	YDR288W	TOK1	P40310	691 aa		6.29	□□□□□ -1.4
NSE3	YDR288W	LPX1	Q12405	387 aa	Known RBP	6.29	□□□□□ -1.4
NSE3	YDR288W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	6.28	□□□□□ -1.4	not detected
NSE3	YDR288W	NPP1	P25353	742 aa		6.28	□□□□□ -1.4
NSE3	YDR288W	MAC1	P35192	417 aa		6.28	□□□□□ -1.4
NSE3	YDR288W	TSL1	P38427	1098 aa	Known RBP	6.28	□□□□□ -1.4
NSE3	YDR288W	FPR3	P38911	411 aa	Known RBP	6.28	□□□□□ -1.4
NSE3	YDR288W	GDH3	P39708	457 aa		6.28	□□□□□ -1.4
NSE3	YDR288W	ALG2	P43636	503 aa		6.28	□□□□□ -1.4
NSE3	YDR288W	NIT3	P49954	291 aa		6.28	□□□□□ -1.4
NSE3	YDR288W	SPC42	P36094	363 aa		6.27	□□□□□ -1.41
NSE3	YDR288W	ERT1	P38140	529 aa		6.27	□□□□□ -1.41
NSE3	YDR288W	MNN1	P39106	762 aa		6.27	□□□□□ -1.41
NSE3	YDR288W	SFB2	P53953	876 aa		6.27	□□□□□ -1.41
NSE3	YDR288W	UTP14	Q04500	899 aa	Known RBP	6.27	□□□□□ -1.41
NSE3	YDR288W	CMP2	P14747	604 aa		6.26	□□□□□ -1.41
NSE3	YDR288W	RFA1	P22336	621 aa	Known RBP	6.26	□□□□□ -1.41
NSE3	YDR288W	RPC82	P32349	654 aa		6.26	□□□□□ -1.41
NSE3	YDR288W	ETP1	P38748	585 aa	Known RBP	6.26	□□□□□ -1.41
NSE3	YDR288W	YAP1801	P38856	637 aa		6.26	□□□□□ -1.41
NSE3	YDR288W	ORC3	P54790	616 aa		6.26	□□□□□ -1.41
NSE3	YDR288W	DOS2	P54858	310 aa		6.26	□□□□□ -1.41
NSE3	YDR288W	ENA1	P13587	1091 aa		6.25	□□□□□ -1.41
NSE3	YDR288W	RAD53	P22216	821 aa		6.25	□□□□□ -1.41
NSE3	YDR288W	MSH2	P25847	964 aa		6.25	□□□□□ -1.41
NSE3	YDR288W	AFR1	P33304	620 aa		6.25	□□□□□ -1.41
NSE3	YDR288W	ABZ1	P37254	787 aa	Predicted RBP	6.25	□□□□□ -1.41
NSE3	YDR288W	POL12	P38121	705 aa	Predicted RBP	6.25	□□□□□ -1.41
NSE3	YDR288W	ENA2	Q01896	1091 aa		6.25	□□□□□ -1.41
NSE3	YDR288W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	6.25	□□□□□ -1.41	not detected
NSE3	YDR288W	ENA5	Q12691	1091 aa		6.25	□□□□□ -1.41
NSE3	YDR288W	CYC1	P00044	109 aa	Predicted RBP	6.24	□□□□□ -1.41
NSE3	YDR288W	GSY1	P23337	708 aa		6.24	□□□□□ -1.41
NSE3	YDR288W	ECM21	P38167	1117 aa	Known RBP	6.24	□□□□□ -1.41
NSE3	YDR288W	DSS1	P39112	969 aa		6.24	□□□□□ -1.41
NSE3	YDR288W	NPP2	P39997	493 aa		6.24	□□□□□ -1.41
NSE3	YDR288W	CTH1	P47976	325 aa		6.24	□□□□□ -1.41
NSE3	YDR288W	DAM1	P53267	343 aa		6.24	□□□□□ -1.41
NSE3	YDR288W	VPS30	Q02948	557 aa		6.24	□□□□□ -1.41
NSE3	YDR288W	BUL2	Q03758	920 aa	Known RBP	6.24	□□□□□ -1.41
NSE3	YDR288W	XYL2	Q07993	356 aa		6.24	□□□□□ -1.41
NSE3	YDR288W	SFP1	P32432	683 aa		6.23	□□□□□ -1.41
NSE3	YDR288W	PEX6	P33760	1030 aa		6.23	□□□□□ -1.41
NSE3	YDR288W	INP52	P50942	1183 aa		6.23	□□□□□ -1.41
NSE3	YDR288W	UGO1	Q03327	502 aa		6.23	□□□□□ -1.41
NSE3	YDR288W	MSC2	Q03455	724 aa		6.23	□□□□□ -1.41
NSE3	YDR288W	YGR161W-C	Q3E744	92 aa		6.23	□□□□□ -1.41
NSE3	YDR288W	ZRG8	P40021	1076 aa		6.22	□□□□□ -1.41
NSE3	YDR288W	SNO2	P53823	222 aa		6.22	□□□□□ -1.41
NSE3	YDR288W	SIZ1	Q04195	904 aa		6.22	□□□□□ -1.41
NSE3	YDR288W	YDR514C	Q04408	483 aa		6.22	□□□□□ -1.41
NSE3	YDR288W	NOT3	P06102	836 aa	Known RBP	6.21	□□□□□ -1.42
NSE3	YDR288W	MPH2	P0CD99	609 aa		6.21	□□□□□ -1.42
NSE3	YDR288W	SRP101	P32916	621 aa		6.21	□□□□□ -1.42
NSE3	YDR288W	PSP2	P50109	593 aa	Known RBP	6.21	□□□□□ -1.42
NSE3	YDR288W	YGR012W	P53206	393 aa		6.21	□□□□□ -1.42
NSE3	YDR288W	NTG2	Q08214	380 aa		6.21	□□□□□ -1.42
NSE3	YDR288W	DFG16	Q99234	619 aa		6.21	□□□□□ -1.42
NSE3	YDR288W	RPS9A	O13516	197 aa	Known RBP	6.2	□□□□□ -1.42
NSE3	YDR288W	GAL10	P04397	699 aa		6.2	□□□□□ -1.42
NSE3	YDR288W	HSF1	P10961	833 aa		6.2	□□□□□ -1.42
NSE3	YDR288W	SPC29	P33419	253 aa		6.2	□□□□□ -1.42
NSE3	YDR288W	EMC3	P36039	253 aa		6.2	□□□□□ -1.42
NSE3	YDR288W	CEP3	P40969	608 aa		6.2	□□□□□ -1.42
NSE3	YDR288W	ENV7	Q12003	364 aa		6.2	□□□□□ -1.42
NSE3	YDR288W	RIB2	Q12362	591 aa	Known RBP	6.2	□□□□□ -1.42
NSE3	YDR288W	NOP14	Q99207	810 aa	Known RBP	6.2	□□□□□ -1.42
NSE3	YDR288W	YBR238C	P38330	731 aa	Known RBP	6.19	□□□□□ -1.42
NSE3	YDR288W	GYP8	P43570	497 aa		6.19	□□□□□ -1.42
NSE3	YDR288W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	6.19	□□□□□ -1.42	not detected
NSE3	YDR288W	YKE2	P52553	114 aa		6.19	□□□□□ -1.42
NSE3	YDR288W	MAL11	P53048	616 aa		6.19	□□□□□ -1.42
NSE3	YDR288W	RAI1	P53063	387 aa	Known RBP	6.19	□□□□□ -1.42
NSE3	YDR288W	PBP1	P53297	722 aa	Known RBP	6.19	□□□□□ -1.42
NSE3	YDR288W	YGR283C	P53336	341 aa	Predicted RBP	6.19	□□□□□ -1.42
NSE3	YDR288W	ROT1	Q03691	256 aa		6.19	□□□□□ -1.42
NSE3	YDR288W	SGD1	Q06132	899 aa		6.19	□□□□□ -1.42
NSE3	YDR288W	MDM12	Q92328	271 aa		6.19	□□□□□ -1.42
NSE3	YDR288W	VBA3	P25594	458 aa		6.18	□□□□□ -1.42
NSE3	YDR288W	NOG2	P53742	486 aa	Known RBP	6.18	□□□□□ -1.42
NSE3	YDR288W	REH1	Q06709	432 aa		6.18	□□□□□ -1.42
NSE3	YDR288W	SAP190	P36123	1033 aa		6.17	□□□□□ -1.42
NSE3	YDR288W	ECL1	P48235	211 aa		6.17	□□□□□ -1.42
NSE3	YDR288W	GTF1	P53260	183 aa	Predicted RBP	6.17	□□□□□ -1.42
NSE3	YDR288W	MRPL22	P53881	309 aa		6.17	□□□□□ -1.42
NSE3	YDR288W	TFB2	Q02939	513 aa		6.17	□□□□□ -1.42
NSE3	YDR288W	MET7	Q08645	548 aa		6.17	□□□□□ -1.42
NSE3	YDR288W	DAL7	P21826	554 aa		6.16	□□□□□ -1.42
NSE3	YDR288W	SRM1	P21827	482 aa		6.16	□□□□□ -1.42
NSE3	YDR288W	LRG1	P35688	1017 aa		6.16	□□□□□ -1.42
NSE3	YDR288W	POA1	P38218	177 aa		6.16	□□□□□ -1.42
NSE3	YDR288W	PUS2	P53167	370 aa		6.16	□□□□□ -1.42
NSE3	YDR288W	DNM1	P54861	757 aa		6.16	□□□□□ -1.42
NSE3	YDR288W	ATP25	Q03153	612 aa		6.16	□□□□□ -1.42
NSE3	YDR288W	YDL177C	Q12257	170 aa		6.16	□□□□□ -1.42
NSE3	YDR288W	ADR1	P07248	1323 aa		6.16	□□□□□ -1.42
NSE3	YDR288W	PER1	P25625	357 aa		6.15	□□□□□ -1.42
NSE3	YDR288W	URA1	P28272	314 aa	Predicted RBP	6.15	□□□□□ -1.42

Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms