RNA–Protein interactions for RNA: YDR171W

HSP42, Transcript of Small heat shock protein (sHSP) with chaperone activity, yeastyeast

Gene HSP42, Length 1,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HSP42YDR171W RSM24Q03976 319 aa5.4□□□□□ -1.54
HSP42YDR171W YPR071WQ12346 211 aa5.4□□□□□ -1.54
HSP42YDR171W SMC4Q12267 1418 aa5.4□□□□□ -1.55
HSP42YDR171W CYC1P00044 109 aaPredicted RBP5.39□□□□□ -1.55
HSP42YDR171W ADE8P04161 214 aa5.39□□□□□ -1.55
HSP42YDR171W CMP2P14747 604 aa5.39□□□□□ -1.55
HSP42YDR171W GAL11P19659 1081 aa5.39□□□□□ -1.55
HSP42YDR171W CDC11P32458 415 aa5.39□□□□□ -1.55
HSP42YDR171W TIM23P32897 222 aa5.39□□□□□ -1.55
HSP42YDR171W AFR1P33304 620 aa5.39□□□□□ -1.55
HSP42YDR171W NPL3Q01560 414 aaKnown RBP RIP-Chip data5.39□□□□□ -1.55 RIP-Chip
HSP42YDR171W SRT1Q03175 343 aa5.39□□□□□ -1.55
HSP42YDR171W YDL124WQ07551 312 aaKnown RBP5.39□□□□□ -1.55
HSP42YDR171W PPM2Q08282 695 aa5.39□□□□□ -1.55
HSP42YDR171W YLL058WQ12198 575 aa5.39□□□□□ -1.55
HSP42YDR171W OSW2Q12202 724 aa5.39□□□□□ -1.55
HSP42YDR171W MLP2P40457 1679 aa5.39□□□□□ -1.55
HSP42YDR171W DNA2P38859 1522 aa5.38□□□□□ -1.55
HSP42YDR171W CIT2P08679 460 aa5.38□□□□□ -1.55
HSP42YDR171W ERR1P0CX10 437 aa5.38□□□□□ -1.55
HSP42YDR171W ERR2P0CX11 437 aa5.38□□□□□ -1.55
HSP42YDR171W KIN2P13186 1147 aaKnown RBP5.38□□□□□ -1.55
HSP42YDR171W MSD1P15179 658 aaKnown RBP5.38□□□□□ -1.55
HSP42YDR171W SEG2P34250 1132 aa5.38□□□□□ -1.55
HSP42YDR171W BET3P36149 193 aa5.38□□□□□ -1.55
HSP42YDR171W SIT1P39980 628 aa5.38□□□□□ -1.55
HSP42YDR171W BUD6P41697 788 aa5.38□□□□□ -1.55
HSP42YDR171W RTA1P53047 317 aa5.38□□□□□ -1.55
HSP42YDR171W SFB2P53953 876 aa5.38□□□□□ -1.55
HSP42YDR171W VTS1Q08831 523 aaKnown RBP RIP-Chip data5.38□□□□□ -1.55not detected
HSP42YDR171W YPK9Q12697 1472 aa5.38□□□□□ -1.55
HSP42YDR171W CAB3P36076 571 aa5.37□□□□□ -1.55
HSP42YDR171W YER158CP40095 573 aa5.37□□□□□ -1.55
HSP42YDR171W FPR4Q06205 392 aaPredicted RBP5.37□□□□□ -1.55
HSP42YDR171W YPR196WQ06595 470 aa5.37□□□□□ -1.55
HSP42YDR171W SSM4P40318 1319 aa5.37□□□□□ -1.55
HSP42YDR171W YOR1P53049 1477 aa5.37□□□□□ -1.55
HSP42YDR171W GAL10P04397 699 aa5.36□□□□□ -1.55
HSP42YDR171W TOM70P07213 617 aaKnown RBP5.36□□□□□ -1.55
HSP42YDR171W SRM1P21827 482 aa5.36□□□□□ -1.55
HSP42YDR171W FUN30P31380 1131 aa5.36□□□□□ -1.55
HSP42YDR171W TSL1P38427 1098 aaKnown RBP5.36□□□□□ -1.55
HSP42YDR171W GGA2P38817 585 aaKnown RBP5.36□□□□□ -1.55
HSP42YDR171W YAP1801P38856 637 aa5.36□□□□□ -1.55
HSP42YDR171W TOK1P40310 691 aa5.36□□□□□ -1.55
HSP42YDR171W MRPL22P53881 309 aa5.36□□□□□ -1.55
HSP42YDR171W ROT1Q03691 256 aa5.36□□□□□ -1.55
HSP42YDR171W LCD1Q04377 747 aa5.36□□□□□ -1.55
HSP42YDR171W SWR1Q05471 1514 aa5.36□□□□□ -1.55
HSP42YDR171W RKR1Q04781 1562 aa5.36□□□□□ -1.55
HSP42YDR171W PET10P36139 283 aa5.35□□□□□ -1.55
HSP42YDR171W CHZ1P40019 153 aaPredicted RBP5.35□□□□□ -1.55
HSP42YDR171W NUP82P40368 713 aa5.35□□□□□ -1.55
HSP42YDR171W GYP7P48365 746 aa5.35□□□□□ -1.55
HSP42YDR171W ENV11P53246 860 aa5.35□□□□□ -1.55
HSP42YDR171W NRD1P53617 575 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
HSP42YDR171W SNO2P53823 222 aa5.35□□□□□ -1.55
HSP42YDR171W MSC2Q03455 724 aa5.35□□□□□ -1.55
HSP42YDR171W BUL2Q03758 920 aaKnown RBP5.35□□□□□ -1.55
HSP42YDR171W PAN1P32521 1480 aa5.34□□□□□ -1.55
HSP42YDR171W ENA1P13587 1091 aa5.34□□□□□ -1.55
HSP42YDR171W GAS1P22146 559 aaKnown RBP5.34□□□□□ -1.55
HSP42YDR171W CDC48P25694 835 aaKnown RBP5.34□□□□□ -1.55
HSP42YDR171W SRP101P32916 621 aa5.34□□□□□ -1.55
HSP42YDR171W ECM21P38167 1117 aaKnown RBP5.34□□□□□ -1.55
HSP42YDR171W ECL1P48235 211 aa5.34□□□□□ -1.55
HSP42YDR171W ENA2Q01896 1091 aa5.34□□□□□ -1.55
HSP42YDR171W SIZ1Q04195 904 aa5.34□□□□□ -1.55
HSP42YDR171W YOR352WQ08816 343 aa5.34□□□□□ -1.55
HSP42YDR171W ENA5Q12691 1091 aa5.34□□□□□ -1.55
HSP42YDR171W SNQ2P32568 1501 aaKnown RBP5.33□□□□□ -1.56
HSP42YDR171W BUD4P47136 1447 aa5.33□□□□□ -1.56
HSP42YDR171W DOM34P33309 386 aa5.33□□□□□ -1.56
HSP42YDR171W REC104P33323 182 aa5.33□□□□□ -1.56
HSP42YDR171W EBP2P36049 427 aaKnown RBP5.33□□□□□ -1.56
HSP42YDR171W UBP6P43593 499 aaKnown RBP5.33□□□□□ -1.56
HSP42YDR171W OSW7P43611 510 aa5.33□□□□□ -1.56
HSP42YDR171W GTF1P53260 183 aaPredicted RBP5.33□□□□□ -1.56
HSP42YDR171W PLB2Q03674 706 aa5.33□□□□□ -1.56
HSP42YDR171W SGD1Q06132 899 aa5.33□□□□□ -1.56
HSP42YDR171W PHO8P11491 566 aa5.32□□□□□ -1.56
HSP42YDR171W PPG1P32838 368 aa5.32□□□□□ -1.56
HSP42YDR171W YKR078WP36158 585 aaKnown RBP5.32□□□□□ -1.56
HSP42YDR171W ZRG8P40021 1076 aa5.32□□□□□ -1.56
HSP42YDR171W AVT1P47082 602 aa5.32□□□□□ -1.56
HSP42YDR171W CCM1P48237 864 aaPredicted RBP5.32□□□□□ -1.56
HSP42YDR171W RNH70P53331 553 aa5.32□□□□□ -1.56
HSP42YDR171W SPT7P35177 1332 aa5.31□□□□□ -1.56
HSP42YDR171W ATG2P53855 1592 aa5.31□□□□□ -1.56
HSP42YDR171W GCV2P49095 1034 aa5.31□□□□□ -1.56
HSP42YDR171W RNQ1P25367 405 aa5.3□□□□□ -1.56
HSP42YDR171W TSA1P34760 196 aaKnown RBP5.3□□□□□ -1.56
HSP42YDR171W LAM1P38851 1228 aa5.3□□□□□ -1.56
HSP42YDR171W MND2P40577 368 aa5.3□□□□□ -1.56
HSP42YDR171W YGR012WP53206 393 aa5.3□□□□□ -1.56
HSP42YDR171W CDA2Q06703 312 aa5.3□□□□□ -1.56
HSP42YDR171W YLR125WQ12138 136 aa5.3□□□□□ -1.56
HSP42YDR171W PEP1P32319 1579 aa5.29□□□□□ -1.56
HSP42YDR171W PDR10P51533 1564 aa5.29□□□□□ -1.56
HSP42YDR171W THI4P32318 326 aa5.29□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms