RNA–Protein interactions for RNA: YDL212W

SHR3, Transcript of Endoplasmic reticulum packaging chaperone, yeastyeast

Gene SHR3, Length 633 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHR3YDL212W YAP6Q03935 383 aa6.21□□□□□ -1.42
SHR3YDL212W TPO1Q07824 586 aa6.21□□□□□ -1.42
SHR3YDL212W ENA5Q12691 1091 aa6.21□□□□□ -1.42
SHR3YDL212W YHR020WP38708 688 aaKnown RBP6.2□□□□□ -1.42
SHR3YDL212W TIM54P47045 478 aa6.2□□□□□ -1.42
SHR3YDL212W YGR012WP53206 393 aa6.2□□□□□ -1.42
SHR3YDL212W RXT3Q07458 294 aa6.2□□□□□ -1.42
SHR3YDL212W ACK1Q07622 623 aaPredicted RBP6.2□□□□□ -1.42
SHR3YDL212W ADY3Q07732 790 aa6.2□□□□□ -1.42
SHR3YDL212W DOM34P33309 386 aa6.19□□□□□ -1.42
SHR3YDL212W YRO2P38079 344 aa6.19□□□□□ -1.42
SHR3YDL212W YBR284WP38150 797 aa6.18□□□□□ -1.42
SHR3YDL212W CCC2P38995 1004 aa6.18□□□□□ -1.42
SHR3YDL212W ERP6P53198 216 aa6.18□□□□□ -1.42
SHR3YDL212W PBP1P53297 722 aaKnown RBP6.18□□□□□ -1.42
SHR3YDL212W CLU1Q03690 1277 aaKnown RBP6.18□□□□□ -1.42
SHR3YDL212W EAF1Q06337 982 aa6.18□□□□□ -1.42
SHR3YDL212W YCR015CP25616 317 aa6.17□□□□□ -1.42
SHR3YDL212W YKR078WP36158 585 aaKnown RBP6.17□□□□□ -1.42
SHR3YDL212W POA1P38218 177 aa6.17□□□□□ -1.42
SHR3YDL212W TOK1P40310 691 aa6.17□□□□□ -1.42
SHR3YDL212W IOC3P43596 787 aa6.17□□□□□ -1.42
SHR3YDL212W YJL049WP47048 450 aa6.17□□□□□ -1.42
SHR3YDL212W YKE2P52553 114 aa6.17□□□□□ -1.42
SHR3YDL212W HUL5P53119 910 aa6.17□□□□□ -1.42
SHR3YDL212W SPO75Q07798 868 aa6.17□□□□□ -1.42
SHR3YDL212W HBN1Q96VH4 193 aa6.17□□□□□ -1.42
SHR3YDL212W SPE1P08432 466 aa6.16□□□□□ -1.42
SHR3YDL212W TOP3P13099 656 aa6.16□□□□□ -1.42
SHR3YDL212W LST4P34239 828 aa6.16□□□□□ -1.42
SHR3YDL212W YBR238CP38330 731 aaKnown RBP6.16□□□□□ -1.42
SHR3YDL212W MET12P46151 657 aa6.16□□□□□ -1.42
SHR3YDL212W TMA10Q06177 86 aa6.16□□□□□ -1.42
SHR3YDL212W BDF2Q07442 638 aa6.16□□□□□ -1.42
SHR3YDL212W YPR071WQ12346 211 aa6.16□□□□□ -1.42
SHR3YDL212W YLR358CO13565 187 aa6.15□□□□□ -1.42
SHR3YDL212W CIT1P00890 479 aa6.15□□□□□ -1.42
SHR3YDL212W ADE8P04161 214 aa6.15□□□□□ -1.42
SHR3YDL212W MSD1P15179 658 aaKnown RBP6.15□□□□□ -1.42
SHR3YDL212W ARE1P25628 610 aa6.15□□□□□ -1.42
SHR3YDL212W CDC48P25694 835 aaKnown RBP6.15□□□□□ -1.42
SHR3YDL212W GIP4P39732 760 aa6.15□□□□□ -1.42
SHR3YDL212W TPO2P53283 614 aa6.15□□□□□ -1.42
SHR3YDL212W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.15□□□□□ -1.42 RIP-Chip
SHR3YDL212W YLR224WQ05947 369 aa6.15□□□□□ -1.42
SHR3YDL212W YPR196WQ06595 470 aa6.15□□□□□ -1.42
SHR3YDL212W WHI4Q07655 649 aaKnown RBP6.15□□□□□ -1.42
SHR3YDL212W HSF1P10961 833 aa6.14□□□□□ -1.43
SHR3YDL212W CTS1P29029 562 aa6.14□□□□□ -1.43
SHR3YDL212W NNF1P47149 201 aa6.14□□□□□ -1.43
SHR3YDL212W YGR125WP53273 1036 aa6.14□□□□□ -1.43
SHR3YDL212W TAF8Q03750 510 aa6.14□□□□□ -1.43
SHR3YDL212W LCD1Q04377 747 aa6.14□□□□□ -1.43
SHR3YDL212W NSE3Q05541 303 aa6.14□□□□□ -1.43
SHR3YDL212W OSH2Q12451 1283 aa6.14□□□□□ -1.43
SHR3YDL212W HIS5P07172 385 aa6.13□□□□□ -1.43
SHR3YDL212W HSP60P19882 572 aaKnown RBP6.13□□□□□ -1.43
SHR3YDL212W RPC82P32349 654 aa6.13□□□□□ -1.43
SHR3YDL212W YKL222CP35995 705 aa6.13□□□□□ -1.43
SHR3YDL212W OCA5P38738 679 aa6.13□□□□□ -1.43
SHR3YDL212W NOP12Q08208 459 aaKnown RBP6.13□□□□□ -1.43
SHR3YDL212W FLC1Q08967 793 aa6.13□□□□□ -1.43
SHR3YDL212W NOT3P06102 836 aaKnown RBP6.12□□□□□ -1.43
SHR3YDL212W PET10P36139 283 aa6.12□□□□□ -1.43
SHR3YDL212W PLB1P39105 664 aa6.12□□□□□ -1.43
SHR3YDL212W BET3P36149 193 aa6.11□□□□□ -1.43
SHR3YDL212W SHM2P37291 469 aaKnown RBP6.11□□□□□ -1.43
SHR3YDL212W RSP5P39940 809 aaKnown RBP6.11□□□□□ -1.43
SHR3YDL212W CHA4P43634 648 aa6.11□□□□□ -1.43
SHR3YDL212W RTA1P53047 317 aa6.11□□□□□ -1.43
SHR3YDL212W RAI1P53063 387 aaKnown RBP6.11□□□□□ -1.43
SHR3YDL212W CDC53Q12018 815 aaKnown RBP6.11□□□□□ -1.43
SHR3YDL212W YOL098CQ12496 1037 aa6.11□□□□□ -1.43
SHR3YDL212W CDC11P32458 415 aa6.1□□□□□ -1.43
SHR3YDL212W MPT5P39016 859 aaKnown RBP RIP-Chip data6.1□□□□□ -1.43not detected
SHR3YDL212W CCM1P48237 864 aaPredicted RBP6.1□□□□□ -1.43
SHR3YDL212W REC104P33323 182 aa6.09□□□□□ -1.43
SHR3YDL212W URM1P40554 99 aaPredicted RBP6.09□□□□□ -1.43
SHR3YDL212W PSP2P50109 593 aaKnown RBP6.09□□□□□ -1.43
SHR3YDL212W SSL1Q04673 461 aaPredicted RBP6.09□□□□□ -1.43
SHR3YDL212W PPM2Q08282 695 aa6.09□□□□□ -1.43
SHR3YDL212W KCS1Q12494 1050 aa6.09□□□□□ -1.43
SHR3YDL212W CAN1P04817 590 aa6.08□□□□□ -1.44
SHR3YDL212W STE11P23561 717 aa6.08□□□□□ -1.44
SHR3YDL212W RPD3P32561 433 aa6.08□□□□□ -1.44
SHR3YDL212W STE13P33894 931 aa6.08□□□□□ -1.44
SHR3YDL212W MCM6P53091 1017 aaKnown RBP6.08□□□□□ -1.44
SHR3YDL212W ENV7Q12003 364 aa6.08□□□□□ -1.44
SHR3YDL212W STI1P15705 589 aaKnown RBP RIP-Chip data6.07□□□□□ -1.44not detected
SHR3YDL212W UBP6P43593 499 aaKnown RBP6.07□□□□□ -1.44
SHR3YDL212W MNN10P50108 393 aaKnown RBP6.07□□□□□ -1.44
SHR3YDL212W NCS6P53088 359 aa6.07□□□□□ -1.44
SHR3YDL212W YDL124WQ07551 312 aaKnown RBP6.07□□□□□ -1.44
SHR3YDL212W UPC2Q12151 913 aa6.07□□□□□ -1.44
SHR3YDL212W NPC2Q12408 173 aa6.07□□□□□ -1.44
SHR3YDL212W HDA1P53973 706 aa6.06□□□□□ -1.44
SHR3YDL212W STE14P32584 239 aa6.05□□□□□ -1.44
SHR3YDL212W HUL4P40985 892 aa6.05□□□□□ -1.44
SHR3YDL212W TOM70P07213 617 aaKnown RBP6.04□□□□□ -1.44
SHR3YDL212W FBP1P09201 348 aa6.04□□□□□ -1.44
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms