RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C ERR1P0CX10 437 aa4.43□□□□□ -1.7
RRP42YDL111C ERR2P0CX11 437 aa4.43□□□□□ -1.7
RRP42YDL111C DBP5P20449 482 aaKnown RBP4.43□□□□□ -1.7
RRP42YDL111C SRM1P21827 482 aa4.43□□□□□ -1.7
RRP42YDL111C MSH2P25847 964 aa4.43□□□□□ -1.7
RRP42YDL111C RFC5P38251 354 aa4.43□□□□□ -1.7
RRP42YDL111C UBP12P39538 1254 aa4.43□□□□□ -1.7
RRP42YDL111C GAL10P04397 699 aa4.42□□□□□ -1.7
RRP42YDL111C MLS1P30952 554 aa4.42□□□□□ -1.7
RRP42YDL111C RTS3P53289 263 aa4.42□□□□□ -1.7
RRP42YDL111C UGO1Q03327 502 aa4.42□□□□□ -1.7
RRP42YDL111C ATG13Q06628 738 aa4.42□□□□□ -1.7
RRP42YDL111C YDL124WQ07551 312 aaKnown RBP4.42□□□□□ -1.7
RRP42YDL111C CMP2P14747 604 aa4.41□□□□□ -1.7
RRP42YDL111C MOT2P34909 587 aaKnown RBP4.41□□□□□ -1.7
RRP42YDL111C MPH1P40562 993 aa4.41□□□□□ -1.7
RRP42YDL111C NOP2P40991 618 aaKnown RBP4.41□□□□□ -1.7
RRP42YDL111C ALR2P43553 858 aa4.41□□□□□ -1.7
RRP42YDL111C YGL176CP46945 554 aa4.41□□□□□ -1.7
RRP42YDL111C ATG36P46983 293 aa4.41□□□□□ -1.7
RRP42YDL111C TPO2P53283 614 aa4.41□□□□□ -1.7
RRP42YDL111C RIB2Q12362 591 aaKnown RBP4.41□□□□□ -1.7
RRP42YDL111C TAD3Q9URQ3 322 aa4.41□□□□□ -1.7
RRP42YDL111C CDC20P26309 610 aa4.4□□□□□ -1.71
RRP42YDL111C SFP1P32432 683 aa4.4□□□□□ -1.71
RRP42YDL111C CDC11P32458 415 aa4.4□□□□□ -1.71
RRP42YDL111C TRM2P33753 639 aa4.4□□□□□ -1.71
RRP42YDL111C MCM7P38132 845 aa4.4□□□□□ -1.71
RRP42YDL111C CRP1P38845 465 aaKnown RBP4.4□□□□□ -1.71
RRP42YDL111C GEM1P39722 662 aa4.4□□□□□ -1.71
RRP42YDL111C YJR008WP47085 338 aa4.4□□□□□ -1.71
RRP42YDL111C RTA1P53047 317 aa4.4□□□□□ -1.71
RRP42YDL111C DNM1P54861 757 aa4.4□□□□□ -1.71
RRP42YDL111C NTG2Q08214 380 aa4.4□□□□□ -1.71
RRP42YDL111C YPL066WQ12194 479 aa4.4□□□□□ -1.71
RRP42YDL111C SVS1Q12254 260 aa4.4□□□□□ -1.71
RRP42YDL111C CDC6P09119 513 aa4.39□□□□□ -1.71
RRP42YDL111C KIN2P13186 1147 aaKnown RBP4.39□□□□□ -1.71
RRP42YDL111C BET3P36149 193 aa4.39□□□□□ -1.71
RRP42YDL111C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71 RIP-Chip
RRP42YDL111C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
RRP42YDL111C SIZ1Q04195 904 aa4.39□□□□□ -1.71
RRP42YDL111C ACK1Q07622 623 aaPredicted RBP4.39□□□□□ -1.71
RRP42YDL111C GPB1Q08886 897 aa4.39□□□□□ -1.71
RRP42YDL111C PUS9Q12069 462 aa4.39□□□□□ -1.71
RRP42YDL111C GNT1Q12096 491 aa4.39□□□□□ -1.71
RRP42YDL111C RPL8AP17076 256 aaKnown RBP4.38□□□□□ -1.71
RRP42YDL111C STE11P23561 717 aa4.38□□□□□ -1.71
RRP42YDL111C APL1P27351 700 aa4.38□□□□□ -1.71
RRP42YDL111C HBS1P32769 611 aaKnown RBP4.38□□□□□ -1.71
RRP42YDL111C MBP1P39678 833 aa4.38□□□□□ -1.71
RRP42YDL111C GDH3P39708 457 aa4.38□□□□□ -1.71
RRP42YDL111C YEN1P40028 759 aa4.38□□□□□ -1.71
RRP42YDL111C HSV2P50079 448 aaPredicted RBP4.38□□□□□ -1.71
RRP42YDL111C PBP1P53297 722 aaKnown RBP4.38□□□□□ -1.71
RRP42YDL111C YNR029CP53729 429 aaKnown RBP4.38□□□□□ -1.71
RRP42YDL111C RXT3Q07458 294 aa4.38□□□□□ -1.71
RRP42YDL111C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.38□□□□□ -1.71not detected
RRP42YDL111C ADR1P07248 1323 aa4.38□□□□□ -1.71
RRP42YDL111C MRC1P25588 1096 aa4.37□□□□□ -1.71
RRP42YDL111C PEX6P33760 1030 aa4.37□□□□□ -1.71
RRP42YDL111C LST4P34239 828 aa4.37□□□□□ -1.71
RRP42YDL111C PAF1P38351 445 aa4.37□□□□□ -1.71
RRP42YDL111C CCC2P38995 1004 aa4.37□□□□□ -1.71
RRP42YDL111C NUG1P40010 520 aaKnown RBP4.37□□□□□ -1.71
RRP42YDL111C SIP5P40210 489 aaKnown RBP4.37□□□□□ -1.71
RRP42YDL111C GUS1P46655 708 aaKnown RBP RIP-Chip data4.37□□□□□ -1.71not detected
RRP42YDL111C MNN10P50108 393 aaKnown RBP4.37□□□□□ -1.71
RRP42YDL111C ZDS1P50111 915 aaKnown RBP4.37□□□□□ -1.71
RRP42YDL111C VPS62P53285 467 aa4.37□□□□□ -1.71
RRP42YDL111C HBN1Q96VH4 193 aa4.37□□□□□ -1.71
RRP42YDL111C HCM1P25364 564 aa4.36□□□□□ -1.71
RRP42YDL111C SIT1P39980 628 aa4.36□□□□□ -1.71
RRP42YDL111C MXR1P40029 184 aa4.36□□□□□ -1.71
RRP42YDL111C MSE1P48525 536 aa4.36□□□□□ -1.71
RRP42YDL111C MAL11P53048 616 aa4.36□□□□□ -1.71
RRP42YDL111C TFB2Q02939 513 aa4.36□□□□□ -1.71
RRP42YDL111C RPL11AP0C0W9 174 aaKnown RBP4.35□□□□□ -1.71
RRP42YDL111C ACE2P21192 770 aa4.35□□□□□ -1.71
RRP42YDL111C UBP6P43593 499 aaKnown RBP4.35□□□□□ -1.71
RRP42YDL111C PMT3P47190 753 aa4.35□□□□□ -1.71
RRP42YDL111C MSC2Q03455 724 aa4.35□□□□□ -1.71
RRP42YDL111C SPP382Q06411 708 aaPredicted RBP4.35□□□□□ -1.71
RRP42YDL111C URN1Q06525 465 aaKnown RBP4.35□□□□□ -1.71
RRP42YDL111C RPL11BQ3E757 174 aaPredicted RBP4.35□□□□□ -1.71
RRP42YDL111C MDM12Q92328 271 aa4.35□□□□□ -1.71
RRP42YDL111C TOM70P07213 617 aaKnown RBP4.34□□□□□ -1.71
RRP42YDL111C DBP2P24783 546 aaKnown RBP4.34□□□□□ -1.71
RRP42YDL111C AAR2P32357 355 aaPredicted RBP4.34□□□□□ -1.71
RRP42YDL111C SLA2P33338 968 aa4.34□□□□□ -1.71
RRP42YDL111C PET10P36139 283 aa4.34□□□□□ -1.71
RRP42YDL111C UGA2P38067 497 aa4.34□□□□□ -1.71
RRP42YDL111C PNT1P38969 423 aa4.34□□□□□ -1.71
RRP42YDL111C RRT14P40470 206 aa4.34□□□□□ -1.71
RRP42YDL111C HLJ1P48353 224 aa4.34□□□□□ -1.71
RRP42YDL111C MCM6P53091 1017 aaKnown RBP4.34□□□□□ -1.71
RRP42YDL111C TMA10Q06177 86 aa4.34□□□□□ -1.71
RRP42YDL111C YDR306CQ06640 478 aa4.34□□□□□ -1.71
RRP42YDL111C ACM1Q08981 209 aa4.34□□□□□ -1.71
RRP42YDL111C HMI1Q12039 706 aa4.34□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 12.5 ms