RNA–Protein interactions for RNA: YDL076C

RXT3, Transcript of Component of the Rpd3L histone deacetylase complex, yeastyeast

Gene RXT3, Length 885 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RXT3YDL076C RTT10Q08924 1013 aa5.26□□□□□ -1.57
RXT3YDL076C TOM1Q03280 3268 aa5.26□□□□□ -1.57
RXT3YDL076C GSC2P40989 1895 aa5.26□□□□□ -1.57
RXT3YDL076C LCB1P25045 558 aaKnown RBP5.25□□□□□ -1.57
RXT3YDL076C RAD27P26793 382 aa5.25□□□□□ -1.57
RXT3YDL076C PAH1P32567 862 aa5.25□□□□□ -1.57
RXT3YDL076C DUR3P33413 735 aa5.25□□□□□ -1.57
RXT3YDL076C OCT1P35999 772 aa5.25□□□□□ -1.57
RXT3YDL076C PIC2P40035 300 aa5.25□□□□□ -1.57
RXT3YDL076C MTC3P53077 123 aa5.25□□□□□ -1.57
RXT3YDL076C HEF3P53978 1044 aaKnown RBP5.25□□□□□ -1.57
RXT3YDL076C TDA5Q06417 326 aaKnown RBP5.25□□□□□ -1.57
RXT3YDL076C PMA1P05030 918 aaKnown RBP5.24□□□□□ -1.57
RXT3YDL076C GCR1P07261 785 aa5.24□□□□□ -1.57
RXT3YDL076C FUS1P11710 512 aa5.24□□□□□ -1.57
RXT3YDL076C MDL2P33311 773 aa5.24□□□□□ -1.57
RXT3YDL076C MCD4P36051 919 aa5.24□□□□□ -1.57
RXT3YDL076C SHU2P38957 223 aa5.24□□□□□ -1.57
RXT3YDL076C VPS27P40343 622 aaKnown RBP5.24□□□□□ -1.57
RXT3YDL076C LYS14P40971 790 aa5.24□□□□□ -1.57
RXT3YDL076C NOP2P40991 618 aaKnown RBP5.24□□□□□ -1.57
RXT3YDL076C NET1P47035 1189 aa5.24□□□□□ -1.57
RXT3YDL076C TMA46Q12000 345 aaKnown RBP5.24□□□□□ -1.57
RXT3YDL076C FAL1Q12099 399 aaKnown RBP5.24□□□□□ -1.57
RXT3YDL076C TY3A-GQ12173 290 aa5.24□□□□□ -1.57
RXT3YDL076C TY3A-IQ99219 290 aa5.24□□□□□ -1.57
RXT3YDL076C FBP1P09201 348 aa5.23□□□□□ -1.57
RXT3YDL076C IDI1P15496 288 aa5.23□□□□□ -1.57
RXT3YDL076C DUT1P33317 147 aa5.23□□□□□ -1.57
RXT3YDL076C RIM11P38615 370 aa5.23□□□□□ -1.57
RXT3YDL076C PEX28P38848 579 aa5.23□□□□□ -1.57
RXT3YDL076C PSF2P40359 213 aa5.23□□□□□ -1.57
RXT3YDL076C YRB30P53107 440 aaPredicted RBP5.23□□□□□ -1.57
RXT3YDL076C YGR053CP53234 283 aa5.23□□□□□ -1.57
RXT3YDL076C PEX13P80667 386 aa5.23□□□□□ -1.57
RXT3YDL076C NAN1Q02931 896 aaKnown RBP5.23□□□□□ -1.57
RXT3YDL076C RPN4Q03465 531 aa5.23□□□□□ -1.57
RXT3YDL076C OPI10Q08202 246 aa5.23□□□□□ -1.57
RXT3YDL076C CMR1Q12510 522 aaKnown RBP5.23□□□□□ -1.57
RXT3YDL076C NCB2Q92317 146 aa5.23□□□□□ -1.57
RXT3YDL076C FLO11P08640 1367 aa5.22□□□□□ -1.57
RXT3YDL076C PFK2P16862 959 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
RXT3YDL076C RAD53P22216 821 aa5.22□□□□□ -1.57
RXT3YDL076C ADP1P25371 1049 aa5.22□□□□□ -1.57
RXT3YDL076C SWC3P31376 625 aa5.22□□□□□ -1.57
RXT3YDL076C FUN12P39730 1002 aaKnown RBP5.22□□□□□ -1.57
RXT3YDL076C MSH4P40965 878 aaPredicted RBP5.22□□□□□ -1.57
RXT3YDL076C KRI1P42846 591 aaKnown RBP5.22□□□□□ -1.57
RXT3YDL076C TIM54P47045 478 aa5.22□□□□□ -1.57
RXT3YDL076C PIP2P52960 996 aa5.22□□□□□ -1.57
RXT3YDL076C HEH2Q03281 663 aa5.22□□□□□ -1.57
RXT3YDL076C CDC45Q08032 650 aa5.22□□□□□ -1.57
RXT3YDL076C RPS19AP07280 144 aaKnown RBP5.21□□□□□ -1.58
RXT3YDL076C RPS19BP07281 144 aaPredicted RBP5.21□□□□□ -1.58
RXT3YDL076C CIT2P08679 460 aa5.21□□□□□ -1.58
RXT3YDL076C TAF13P11747 167 aa5.21□□□□□ -1.58
RXT3YDL076C NPR1P22211 790 aa5.21□□□□□ -1.58
RXT3YDL076C RAD24P32641 659 aa5.21□□□□□ -1.58
RXT3YDL076C PBP2P38151 413 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
RXT3YDL076C ERG7P38604 731 aa5.21□□□□□ -1.58
RXT3YDL076C SPF1P39986 1215 aaKnown RBP5.21□□□□□ -1.58
RXT3YDL076C ENP2P48234 707 aaKnown RBP5.21□□□□□ -1.58
RXT3YDL076C PCL8Q08966 492 aa5.21□□□□□ -1.58
RXT3YDL076C CYB2P00175 591 aa5.2□□□□□ -1.58
RXT3YDL076C SEC23P15303 768 aaKnown RBP5.2□□□□□ -1.58
RXT3YDL076C BAS1P22035 811 aa5.2□□□□□ -1.58
RXT3YDL076C CDC60P26637 1090 aaKnown RBP5.2□□□□□ -1.58
RXT3YDL076C RPT3P33298 428 aaKnown RBP5.2□□□□□ -1.58
RXT3YDL076C PTK1P36002 662 aaPredicted RBP5.2□□□□□ -1.58
RXT3YDL076C RRP14P36080 434 aaKnown RBP5.2□□□□□ -1.58
RXT3YDL076C YBL028CP38202 106 aa5.2□□□□□ -1.58
RXT3YDL076C HUL5P53119 910 aa5.2□□□□□ -1.58
RXT3YDL076C EAR1Q03212 550 aa5.2□□□□□ -1.58
RXT3YDL076C CFT2Q12102 859 aaPredicted RBP5.2□□□□□ -1.58
RXT3YDL076C GLO4Q12320 285 aa5.2□□□□□ -1.58
RXT3YDL076C SEC18P18759 758 aaKnown RBP5.19□□□□□ -1.58
RXT3YDL076C MSH3P25336 1018 aa5.19□□□□□ -1.58
RXT3YDL076C YKL069WP36088 180 aa5.19□□□□□ -1.58
RXT3YDL076C FPR3P38911 411 aaKnown RBP5.19□□□□□ -1.58
RXT3YDL076C ACA1P39970 489 aa5.19□□□□□ -1.58
RXT3YDL076C INP51P40559 946 aaKnown RBP5.19□□□□□ -1.58
RXT3YDL076C YFL040WP43562 540 aa5.19□□□□□ -1.58
RXT3YDL076C YGL140CP53120 1219 aa5.19□□□□□ -1.58
RXT3YDL076C BUD9P53226 547 aa5.19□□□□□ -1.58
RXT3YDL076C ALG12P53730 551 aa5.19□□□□□ -1.58
RXT3YDL076C EEB1Q02891 456 aa5.19□□□□□ -1.58
RXT3YDL076C NOG1Q02892 647 aaKnown RBP5.19□□□□□ -1.58
RXT3YDL076C SPO20Q04359 397 aa5.19□□□□□ -1.58
RXT3YDL076C CSI1Q04368 295 aa5.19□□□□□ -1.58
RXT3YDL076C INM2Q05533 292 aa5.19□□□□□ -1.58
RXT3YDL076C HDA2Q06629 674 aa5.19□□□□□ -1.58
RXT3YDL076C PPM2Q08282 695 aa5.19□□□□□ -1.58
RXT3YDL076C YKL077WP36081 392 aa5.18□□□□□ -1.58
RXT3YDL076C MAL31P38156 614 aa5.18□□□□□ -1.58
RXT3YDL076C YNG2P38806 282 aaKnown RBP5.18□□□□□ -1.58
RXT3YDL076C KEL1P38853 1164 aaKnown RBP5.18□□□□□ -1.58
RXT3YDL076C TAT2P38967 592 aa5.18□□□□□ -1.58
RXT3YDL076C YIR042CP40586 236 aa5.18□□□□□ -1.58
RXT3YDL076C VPS62P53285 467 aa5.18□□□□□ -1.58
RXT3YDL076C UBP3Q01477 912 aaKnown RBP RIP-Chip data5.18□□□□□ -1.58not detected
Retrieved 100 of 5,963 RNA–protein pairs in 50.2 ms