RNA–Protein interactions for RNA: YDL043C

PRP11, Transcript of Subunit of the SF3a splicing factor complex, yeast

Gene PRP11, Length 801 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRP11	YDL043C	CCM1	P48237	864 aa	Predicted RBP	4.65	□□□□□ -1.67
PRP11	YDL043C	YGR283C	P53336	341 aa	Predicted RBP	4.65	□□□□□ -1.67
PRP11	YDL043C	HOS3	Q02959	697 aa	Known RBP	4.65	□□□□□ -1.67
PRP11	YDL043C	THS1	P04801	734 aa	Known RBP	4.64	□□□□□ -1.67
PRP11	YDL043C	RAD18	P10862	487 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	PCL2	P25693	308 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	NIT1	P40447	199 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	GYP8	P43570	497 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	YJL045W	P47052	634 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	MET13	P53128	600 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	TNA1	P53322	534 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	NCE103	P53615	221 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	YNR014W	P53719	212 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	HFD1	Q04458	532 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	YLL058W	Q12198	575 aa		4.64	□□□□□ -1.67
PRP11	YDL043C	TMA7	Q3E764	64 aa	Known RBP	4.64	□□□□□ -1.67
PRP11	YDL043C	EUG1	P32474	517 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	STO1	P34160	861 aa	Known RBP	4.63	□□□□□ -1.67
PRP11	YDL043C	EMC3	P36039	253 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	GPT2	P36148	743 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	YKR078W	P36158	585 aa	Known RBP	4.63	□□□□□ -1.67
PRP11	YDL043C	UGA2	P38067	497 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	YBR071W	P38243	211 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	NMD3	P38861	518 aa	Known RBP	4.63	□□□□□ -1.67
PRP11	YDL043C	GPP1	P41277	250 aa	Known RBP	4.63	□□□□□ -1.67
PRP11	YDL043C	CAF16	P43569	289 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	TY4A-J	P47023	414 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	DAM1	P53267	343 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	COG6	P53959	839 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	ATP25	Q03153	612 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	MTQ2	Q03920	221 aa	Predicted RBP	4.63	□□□□□ -1.67
PRP11	YDL043C	COG8	Q04632	607 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	SLX4	Q12098	748 aa		4.63	□□□□□ -1.67
PRP11	YDL043C	SNF5	P18480	905 aa		4.62	□□□□□ -1.67
PRP11	YDL043C	SFL1	P20134	766 aa		4.62	□□□□□ -1.67
PRP11	YDL043C	YSC84	P32793	468 aa		4.62	□□□□□ -1.67
PRP11	YDL043C	TSL1	P38427	1098 aa	Known RBP	4.62	□□□□□ -1.67
PRP11	YDL043C	YFL054C	P43549	646 aa		4.62	□□□□□ -1.67
PRP11	YDL043C	GYP7	P48365	746 aa		4.62	□□□□□ -1.67
PRP11	YDL043C	RSC3	Q06639	885 aa		4.62	□□□□□ -1.67
PRP11	YDL043C	MET7	Q08645	548 aa		4.62	□□□□□ -1.67
PRP11	YDL043C	ENV7	Q12003	364 aa		4.62	□□□□□ -1.67
PRP11	YDL043C	YDR215C	Q12240	137 aa		4.62	□□□□□ -1.67
PRP11	YDL043C	TY1A-NL1	Q12391	440 aa	Known RBP	4.62	□□□□□ -1.67
PRP11	YDL043C	YBR238C	P38330	731 aa	Known RBP	4.61	□□□□□ -1.67
PRP11	YDL043C	RRM3	P38766	723 aa		4.61	□□□□□ -1.67
PRP11	YDL043C	SLN1	P39928	1220 aa	Predicted RBP	4.61	□□□□□ -1.67
PRP11	YDL043C	YJR096W	P47137	282 aa		4.61	□□□□□ -1.67
PRP11	YDL043C	TCB2	P48231	1178 aa		4.61	□□□□□ -1.67
PRP11	YDL043C	ALT1	P52893	592 aa		4.61	□□□□□ -1.67
PRP11	YDL043C	ENV11	P53246	860 aa		4.61	□□□□□ -1.67
PRP11	YDL043C	TPP1	Q03796	238 aa		4.61	□□□□□ -1.67
PRP11	YDL043C	MDM38	Q08179	573 aa		4.61	□□□□□ -1.67
PRP11	YDL043C	PUS7	Q08647	676 aa	Known RBP	4.61	□□□□□ -1.67
PRP11	YDL043C	TRE2	Q08693	809 aa		4.61	□□□□□ -1.67
PRP11	YDL043C	YOR378W	Q08902	515 aa		4.61	□□□□□ -1.67
PRP11	YDL043C	ATP4	P05626	244 aa		4.6	□□□□□ -1.67
PRP11	YDL043C	RPS4A	P0CX35	261 aa	Known RBP	4.6	□□□□□ -1.67
PRP11	YDL043C	RPS4B	P0CX36	261 aa	Known RBP	4.6	□□□□□ -1.67
PRP11	YDL043C	MCD4	P36051	919 aa		4.6	□□□□□ -1.67
PRP11	YDL043C	PCM1	P38628	557 aa	Known RBP	4.6	□□□□□ -1.67
PRP11	YDL043C	NAB3	P38996	802 aa	Known RBP RIP-Chip data	4.6	□□□□□ -1.67	not detected
PRP11	YDL043C	NIT3	P49954	291 aa		4.6	□□□□□ -1.67
PRP11	YDL043C	YKE2	P52553	114 aa		4.6	□□□□□ -1.67
PRP11	YDL043C	MTC3	P53077	123 aa		4.6	□□□□□ -1.67
PRP11	YDL043C	SND1	Q04007	877 aa		4.6	□□□□□ -1.67
PRP11	YDL043C	YDR514C	Q04408	483 aa		4.6	□□□□□ -1.67
PRP11	YDL043C	GUD1	Q07729	489 aa		4.6	□□□□□ -1.67
PRP11	YDL043C	MCA1	Q08601	432 aa		4.6	□□□□□ -1.67
PRP11	YDL043C	COQ4	O13525	335 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	BI4	P03879	638 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	CDC48	P25694	835 aa	Known RBP	4.59	□□□□□ -1.67
PRP11	YDL043C	HOG1	P32485	435 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	PRP19	P32523	503 aa	Known RBP	4.59	□□□□□ -1.67
PRP11	YDL043C	MAC1	P35192	417 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	VPS24	P36095	224 aa	Known RBP	4.59	□□□□□ -1.67
PRP11	YDL043C	GIC1	P38785	314 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	CKB2	P38930	258 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	PIK1	P39104	1066 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	NPP2	P39997	493 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	YER158C	P40095	573 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	DAS1	P47005	663 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	PEX14	P53112	341 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	SNP1	Q00916	300 aa	Predicted RBP	4.59	□□□□□ -1.67
PRP11	YDL043C	SRT1	Q03175	343 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	ATG33	Q06485	197 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	REH1	Q06709	432 aa		4.59	□□□□□ -1.67
PRP11	YDL043C	BUD21	Q08492	214 aa	Predicted RBP	4.59	□□□□□ -1.67
PRP11	YDL043C	YTM1	Q12024	460 aa	Predicted RBP	4.59	□□□□□ -1.67
PRP11	YDL043C	MPH2	P0CD99	609 aa		4.58	□□□□□ -1.68
PRP11	YDL043C	PWP2	P25635	923 aa	Known RBP	4.58	□□□□□ -1.68
PRP11	YDL043C	FUN30	P31380	1131 aa		4.58	□□□□□ -1.68
PRP11	YDL043C	PLC1	P32383	869 aa		4.58	□□□□□ -1.68
PRP11	YDL043C	BOI2	P39969	1040 aa		4.58	□□□□□ -1.68
PRP11	YDL043C	DUG1	P43616	481 aa	Known RBP	4.58	□□□□□ -1.68
PRP11	YDL043C	TGL2	P54857	326 aa		4.58	□□□□□ -1.68
PRP11	YDL043C	EAR1	Q03212	550 aa		4.58	□□□□□ -1.68
PRP11	YDL043C	HMG1	P12683	1054 aa		4.57	□□□□□ -1.68
PRP11	YDL043C	HSC82	P15108	705 aa	Known RBP	4.57	□□□□□ -1.68
PRP11	YDL043C	PER1	P25625	357 aa		4.57	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 17.6 ms