RNA–Protein interactions for RNA: YDL003W

MCD1, Transcript of Essential alpha-kleisin subunit of the cohesin complex, yeastyeast

Gene MCD1, Length 1,701 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MCD1YDL003W URM1P40554 99 aaPredicted RBP3.05□□□□□ -1.92
MCD1YDL003W GND2P53319 492 aa3.05□□□□□ -1.92
MCD1YDL003W TRP4P07285 380 aaPredicted RBP3.04□□□□□ -1.92
MCD1YDL003W ALG7P07286 448 aa3.04□□□□□ -1.92
MCD1YDL003W INO1P11986 533 aa3.04□□□□□ -1.92
MCD1YDL003W SED4P25365 1065 aa3.04□□□□□ -1.92
MCD1YDL003W MTH1P35198 433 aa3.04□□□□□ -1.92
MCD1YDL003W YLL058WQ12198 575 aa3.04□□□□□ -1.92
MCD1YDL003W FUN30P31380 1131 aa3.03□□□□□ -1.92
MCD1YDL003W LYP1P32487 611 aa3.03□□□□□ -1.92
MCD1YDL003W MOT2P34909 587 aaKnown RBP3.03□□□□□ -1.92
MCD1YDL003W SNF7P39929 240 aaKnown RBP3.03□□□□□ -1.92
MCD1YDL003W YGL176CP46945 554 aa3.03□□□□□ -1.92
MCD1YDL003W SRT1Q03175 343 aa3.03□□□□□ -1.92
MCD1YDL003W RKM4Q12504 494 aa3.03□□□□□ -1.92
MCD1YDL003W PEX2P32800 271 aa3.02□□□□□ -1.93
MCD1YDL003W YKL107WP34251 309 aa3.02□□□□□ -1.93
MCD1YDL003W TYW3P53177 273 aa3.02□□□□□ -1.93
MCD1YDL003W MUK1Q02866 612 aa3.02□□□□□ -1.93
MCD1YDL003W ESF1Q06344 628 aaKnown RBP3.02□□□□□ -1.93
MCD1YDL003W HBT1Q07653 1046 aaKnown RBP3.02□□□□□ -1.93
MCD1YDL003W NDJ1Q12366 352 aa3.02□□□□□ -1.93
MCD1YDL003W PPR1P07272 904 aaPredicted RBP3.02□□□□□ -1.93
MCD1YDL003W BUL1P48524 976 aa3.02□□□□□ -1.93
MCD1YDL003W SPR28Q04921 423 aa3.02□□□□□ -1.93
MCD1YDL003W HRQ1Q05549 1077 aa3.02□□□□□ -1.93
MCD1YDL003W YPR196WQ06595 470 aa3.02□□□□□ -1.93
MCD1YDL003W TRP2P00899 507 aaKnown RBP3.01□□□□□ -1.93
MCD1YDL003W YKL151CP36059 337 aa3.01□□□□□ -1.93
MCD1YDL003W GIC1P38785 314 aa3.01□□□□□ -1.93
MCD1YDL003W POL32P47110 350 aa3.01□□□□□ -1.93
MCD1YDL003W NAB6Q03735 1134 aaKnown RBP RIP-Chip data3.01□□□□□ -1.93not detected
MCD1YDL003W UPC2Q12151 913 aa3.01□□□□□ -1.93
MCD1YDL003W SRP1Q02821 542 aaKnown RBP3□□□□□ -1.93
MCD1YDL003W EBP2P36049 427 aaKnown RBP2.99□□□□□ -1.93
MCD1YDL003W SPO20Q04359 397 aa2.99□□□□□ -1.93
MCD1YDL003W DAS1P47005 663 aa2.99□□□□□ -1.93
MCD1YDL003W YLR225CQ05948 407 aaKnown RBP2.99□□□□□ -1.93
MCD1YDL003W YPL066WQ12194 479 aa2.99□□□□□ -1.93
MCD1YDL003W RPC82P32349 654 aa2.98□□□□□ -1.93
MCD1YDL003W PPZ2P33329 710 aa2.98□□□□□ -1.93
MCD1YDL003W SFB2P53953 876 aa2.98□□□□□ -1.93
MCD1YDL003W PEX19Q07418 342 aa2.98□□□□□ -1.93
MCD1YDL003W AFT2Q08957 416 aa2.98□□□□□ -1.93
MCD1YDL003W MET3P08536 511 aa2.97□□□□□ -1.93
MCD1YDL003W GFA1P14742 717 aaKnown RBP2.97□□□□□ -1.93
MCD1YDL003W PIN4P34217 668 aaKnown RBP RIP-Chip data2.97□□□□□ -1.93not detected
MCD1YDL003W MRH1Q12117 320 aaPredicted RBP2.97□□□□□ -1.93
MCD1YDL003W CDC43P18898 376 aa2.96□□□□□ -1.93
MCD1YDL003W YHL017WP38745 532 aa2.96□□□□□ -1.93
MCD1YDL003W SDS3P40505 327 aa2.96□□□□□ -1.93
MCD1YDL003W RAI1P53063 387 aaKnown RBP2.96□□□□□ -1.93
MCD1YDL003W DLT1Q04216 342 aa2.96□□□□□ -1.93
MCD1YDL003W HOF1Q05080 669 aa2.96□□□□□ -1.93
MCD1YDL003W FRE5Q08908 694 aa2.96□□□□□ -1.93
MCD1YDL003W PPS1P38148 807 aa2.96□□□□□ -1.94
MCD1YDL003W VPS30Q02948 557 aa2.96□□□□□ -1.94
MCD1YDL003W TRM13Q12383 476 aa2.96□□□□□ -1.94
MCD1YDL003W FYV10P40492 516 aa2.95□□□□□ -1.94
MCD1YDL003W YJR107WP47145 328 aa2.95□□□□□ -1.94
MCD1YDL003W EEB1Q02891 456 aa2.95□□□□□ -1.94
MCD1YDL003W MDM10P18409 493 aa2.94□□□□□ -1.94
MCD1YDL003W HCA4P20448 770 aaKnown RBP2.94□□□□□ -1.94
MCD1YDL003W STE14P32584 239 aa2.94□□□□□ -1.94
MCD1YDL003W PET112P33893 541 aa2.94□□□□□ -1.94
MCD1YDL003W TDP1P38319 544 aa2.94□□□□□ -1.94
MCD1YDL003W KRI1P42846 591 aaKnown RBP2.94□□□□□ -1.94
MCD1YDL003W RMD1Q03441 430 aa2.94□□□□□ -1.94
MCD1YDL003W MSL5Q12186 476 aaKnown RBP RIP-Chip data2.94□□□□□ -1.94not detected
MCD1YDL003W NOT3P06102 836 aaKnown RBP2.93□□□□□ -1.94
MCD1YDL003W CDC34P14682 295 aa2.93□□□□□ -1.94
MCD1YDL003W ATE1P16639 503 aa2.93□□□□□ -1.94
MCD1YDL003W NPP2P39997 493 aa2.93□□□□□ -1.94
MCD1YDL003W SEN54Q02825 467 aaPredicted RBP2.93□□□□□ -1.94
MCD1YDL003W CRR1Q05790 422 aa2.93□□□□□ -1.94
MCD1YDL003W DUS3Q06053 668 aaKnown RBP2.93□□□□□ -1.94
MCD1YDL003W YAP7Q08182 245 aa2.93□□□□□ -1.94
MCD1YDL003W SWM1Q12379 170 aa2.93□□□□□ -1.94
MCD1YDL003W TUB1P09733 447 aaKnown RBP2.93□□□□□ -1.94
MCD1YDL003W CAF20P12962 161 aaKnown RBP2.93□□□□□ -1.94
MCD1YDL003W RIX1P38883 763 aaPredicted RBP2.93□□□□□ -1.94
MCD1YDL003W ELO3P40319 345 aa2.93□□□□□ -1.94
MCD1YDL003W GYP7P48365 746 aa2.93□□□□□ -1.94
MCD1YDL003W DUT1P33317 147 aa2.92□□□□□ -1.94
MCD1YDL003W CTF13P35203 478 aa2.92□□□□□ -1.94
MCD1YDL003W MNN4P36044 1178 aa2.92□□□□□ -1.94
MCD1YDL003W IMO32P53219 342 aa2.92□□□□□ -1.94
MCD1YDL003W ERG5P54781 538 aa2.92□□□□□ -1.94
MCD1YDL003W COQ11Q05892 277 aa2.92□□□□□ -1.94
MCD1YDL003W ICT1Q12385 394 aa2.92□□□□□ -1.94
MCD1YDL003W BNR1P40450 1375 aa2.91□□□□□ -1.94
MCD1YDL003W CDC48P25694 835 aaKnown RBP2.91□□□□□ -1.94
MCD1YDL003W SEC21P32074 935 aaKnown RBP2.91□□□□□ -1.94
MCD1YDL003W CDC12P32468 407 aaKnown RBP2.91□□□□□ -1.94
MCD1YDL003W SLU7Q02775 382 aaKnown RBP2.91□□□□□ -1.94
MCD1YDL003W SSL1Q04673 461 aaPredicted RBP2.91□□□□□ -1.94
MCD1YDL003W TRM11Q12463 433 aa2.91□□□□□ -1.94
MCD1YDL003W YNL162W-AQ3E7A8 72 aa2.91□□□□□ -1.94
MCD1YDL003W SKI3P17883 1432 aaKnown RBP2.91□□□□□ -1.94
MCD1YDL003W KIN3P22209 435 aa2.9□□□□□ -1.94
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms