RNA–Protein interactions for RNA: YBR175W

SWD3, Transcript of Essential subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SWD3, Length 948 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWD3YBR175W ESF2P53743 316 aaKnown RBP3.53□□□□□ -1.84
SWD3YBR175W TIF35Q04067 274 aaKnown RBP3.53□□□□□ -1.84
SWD3YBR175W YOR059CQ08448 450 aaKnown RBP3.53□□□□□ -1.84
SWD3YBR175W RKM4Q12504 494 aa3.53□□□□□ -1.84
SWD3YBR175W HBN1Q96VH4 193 aa3.53□□□□□ -1.84
SWD3YBR175W VBA3P25594 458 aa3.52□□□□□ -1.85
SWD3YBR175W PLC1P32383 869 aa3.52□□□□□ -1.85
SWD3YBR175W HBS1P32769 611 aaKnown RBP3.52□□□□□ -1.85
SWD3YBR175W TFC4P33339 1025 aa3.52□□□□□ -1.85
SWD3YBR175W PIN4P34217 668 aaKnown RBP RIP-Chip data3.52□□□□□ -1.85not detected
SWD3YBR175W NNK1P36003 928 aa3.52□□□□□ -1.85
SWD3YBR175W GPT2P36148 743 aa3.52□□□□□ -1.85
SWD3YBR175W TRZ1P36159 838 aaPredicted RBP3.52□□□□□ -1.85
SWD3YBR175W RDH54P38086 958 aa3.52□□□□□ -1.85
SWD3YBR175W NEM1P38757 446 aa3.52□□□□□ -1.85
SWD3YBR175W MGS1P40151 587 aa3.52□□□□□ -1.85
SWD3YBR175W YGL176CP46945 554 aa3.52□□□□□ -1.85
SWD3YBR175W ALT1P52893 592 aa3.52□□□□□ -1.85
SWD3YBR175W PIP2P52960 996 aa3.52□□□□□ -1.85
SWD3YBR175W YGR045CP53229 120 aa3.52□□□□□ -1.85
SWD3YBR175W MET14Q02196 202 aa3.52□□□□□ -1.85
SWD3YBR175W RKM2Q03942 479 aa3.52□□□□□ -1.85
SWD3YBR175W UTP5Q04177 643 aaKnown RBP3.52□□□□□ -1.85
SWD3YBR175W HFD1Q04458 532 aa3.52□□□□□ -1.85
SWD3YBR175W AVO1Q08236 1176 aa3.52□□□□□ -1.85
SWD3YBR175W YPL066WQ12194 479 aa3.52□□□□□ -1.85
SWD3YBR175W SCP160P06105 1222 aaKnown RBP RIP-Chip data3.51□□□□□ -1.85not detected
SWD3YBR175W DED1P06634 604 aaKnown RBP3.51□□□□□ -1.85
SWD3YBR175W GSY1P23337 708 aa3.51□□□□□ -1.85
SWD3YBR175W MRS6P32864 603 aaKnown RBP3.51□□□□□ -1.85
SWD3YBR175W SMY2P32909 740 aaKnown RBP3.51□□□□□ -1.85
SWD3YBR175W POL12P38121 705 aaPredicted RBP3.51□□□□□ -1.85
SWD3YBR175W RPT2P40327 437 aaKnown RBP3.51□□□□□ -1.85
SWD3YBR175W MMM1P41800 426 aa3.51□□□□□ -1.85
SWD3YBR175W SLS1P42900 643 aa3.51□□□□□ -1.85
SWD3YBR175W IES1P43579 692 aa3.51□□□□□ -1.85
SWD3YBR175W CIT3P43635 486 aa3.51□□□□□ -1.85
SWD3YBR175W MTQ2Q03920 221 aaPredicted RBP3.51□□□□□ -1.85
SWD3YBR175W ALG6Q12001 544 aaKnown RBP3.51□□□□□ -1.85
SWD3YBR175W DFG16Q99234 619 aa3.51□□□□□ -1.85
SWD3YBR175W MPH2P0CD99 609 aa3.5□□□□□ -1.85
SWD3YBR175W RAD53P22216 821 aa3.5□□□□□ -1.85
SWD3YBR175W SYP1P25623 870 aaKnown RBP3.5□□□□□ -1.85
SWD3YBR175W MCM7P38132 845 aa3.5□□□□□ -1.85
SWD3YBR175W YBR284WP38150 797 aa3.5□□□□□ -1.85
SWD3YBR175W YAR028WP39548 234 aa3.5□□□□□ -1.85
SWD3YBR175W UBP6P43593 499 aaKnown RBP3.5□□□□□ -1.85
SWD3YBR175W LAP2Q10740 671 aa3.5□□□□□ -1.85
SWD3YBR175W SWR1Q05471 1514 aa3.49□□□□□ -1.85
SWD3YBR175W GAL1P04385 528 aa3.49□□□□□ -1.85
SWD3YBR175W RPS4AP0CX35 261 aaKnown RBP3.49□□□□□ -1.85
SWD3YBR175W RPS4BP0CX36 261 aaKnown RBP3.49□□□□□ -1.85
SWD3YBR175W MSD1P15179 658 aaKnown RBP3.49□□□□□ -1.85
SWD3YBR175W DBP5P20449 482 aaKnown RBP3.49□□□□□ -1.85
SWD3YBR175W NFS1P25374 497 aa3.49□□□□□ -1.85
SWD3YBR175W YCR015CP25616 317 aa3.49□□□□□ -1.85
SWD3YBR175W PTP2P29461 750 aa3.49□□□□□ -1.85
SWD3YBR175W SSH4P32343 579 aa3.49□□□□□ -1.85
SWD3YBR175W DOM34P33309 386 aa3.49□□□□□ -1.85
SWD3YBR175W HSP78P33416 811 aa3.49□□□□□ -1.85
SWD3YBR175W PTH2P34222 208 aa3.49□□□□□ -1.85
SWD3YBR175W ADD66P36040 267 aa3.49□□□□□ -1.85
SWD3YBR175W MNN4P36044 1178 aa3.49□□□□□ -1.85
SWD3YBR175W EXO84P38261 753 aa3.49□□□□□ -1.85
SWD3YBR175W HSE1P38753 452 aa3.49□□□□□ -1.85
SWD3YBR175W SAH1P39954 449 aaKnown RBP3.49□□□□□ -1.85
SWD3YBR175W CNN1P43618 361 aa3.49□□□□□ -1.85
SWD3YBR175W ELA1P53861 379 aaPredicted RBP3.49□□□□□ -1.85
SWD3YBR175W MDM1Q01846 1127 aa3.49□□□□□ -1.85
SWD3YBR175W RAT1Q02792 1006 aaKnown RBP3.49□□□□□ -1.85
SWD3YBR175W EST2Q06163 884 aa3.49□□□□□ -1.85
SWD3YBR175W ERP4Q12450 207 aa3.49□□□□□ -1.85
SWD3YBR175W CDC9P04819 755 aa3.48□□□□□ -1.85
SWD3YBR175W SRD1P09007 221 aa3.48□□□□□ -1.85
SWD3YBR175W RAD18P10862 487 aa3.48□□□□□ -1.85
SWD3YBR175W NFU1P32860 256 aa3.48□□□□□ -1.85
SWD3YBR175W NIC96P34077 839 aa3.48□□□□□ -1.85
SWD3YBR175W TSA1P34760 196 aaKnown RBP3.48□□□□□ -1.85
SWD3YBR175W WHI3P34761 661 aaKnown RBP3.48□□□□□ -1.85
SWD3YBR175W PET10P36139 283 aa3.48□□□□□ -1.85
SWD3YBR175W ATG14P38270 344 aa3.48□□□□□ -1.85
SWD3YBR175W RIM4P38741 713 aa3.48□□□□□ -1.85
SWD3YBR175W YAP1801P38856 637 aa3.48□□□□□ -1.85
SWD3YBR175W ALG2P43636 503 aa3.48□□□□□ -1.85
SWD3YBR175W VPS53P47061 822 aa3.48□□□□□ -1.85
SWD3YBR175W YJR096WP47137 282 aa3.48□□□□□ -1.85
SWD3YBR175W MET13P53128 600 aa3.48□□□□□ -1.85
SWD3YBR175W YDR306CQ06640 478 aa3.48□□□□□ -1.85
SWD3YBR175W RRP6Q12149 733 aaKnown RBP3.48□□□□□ -1.85
SWD3YBR175W YPR071WQ12346 211 aa3.48□□□□□ -1.85
SWD3YBR175W RRI2Q12348 645 aa3.48□□□□□ -1.85
SWD3YBR175W NSI1Q12457 570 aa3.48□□□□□ -1.85
SWD3YBR175W PHR1P05066 565 aaKnown RBP RIP-Chip data3.47□□□□□ -1.85not detected
SWD3YBR175W APA1P16550 321 aaKnown RBP3.47□□□□□ -1.85
SWD3YBR175W SFL1P20134 766 aa3.47□□□□□ -1.85
SWD3YBR175W AEP2P22136 580 aa3.47□□□□□ -1.85
SWD3YBR175W RET1P22276 1149 aaKnown RBP3.47□□□□□ -1.85
SWD3YBR175W PCL2P25693 308 aa3.47□□□□□ -1.85
SWD3YBR175W AAR2P32357 355 aaPredicted RBP3.47□□□□□ -1.85
SWD3YBR175W PRP19P32523 503 aaKnown RBP3.47□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms