RNA–Protein interactions for RNA: YBR170C

NPL4, Transcript of Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase, yeastyeast

Gene NPL4, Length 1,743 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NPL4YBR170C LCD1Q04377 747 aa5.39□□□□□ -1.55
NPL4YBR170C HFD1Q04458 532 aa5.39□□□□□ -1.55
NPL4YBR170C THS1P04801 734 aaKnown RBP5.38□□□□□ -1.55
NPL4YBR170C RPL11AP0C0W9 174 aaKnown RBP5.38□□□□□ -1.55
NPL4YBR170C PCL2P25693 308 aa5.38□□□□□ -1.55
NPL4YBR170C HIR1P32479 840 aa5.38□□□□□ -1.55
NPL4YBR170C AFR1P33304 620 aa5.38□□□□□ -1.55
NPL4YBR170C MET13P53128 600 aa5.38□□□□□ -1.55
NPL4YBR170C YDL121CQ07541 149 aa5.38□□□□□ -1.55
NPL4YBR170C YPL260WQ08977 551 aa5.38□□□□□ -1.55
NPL4YBR170C RPL11BQ3E757 174 aaPredicted RBP5.38□□□□□ -1.55
NPL4YBR170C ADE8P04161 214 aa5.37□□□□□ -1.55
NPL4YBR170C RAD18P10862 487 aa5.37□□□□□ -1.55
NPL4YBR170C NFS1P25374 497 aa5.37□□□□□ -1.55
NPL4YBR170C YEL1P34225 687 aa5.37□□□□□ -1.55
NPL4YBR170C SEG2P34250 1132 aa5.37□□□□□ -1.55
NPL4YBR170C YKL222CP35995 705 aa5.37□□□□□ -1.55
NPL4YBR170C YRO2P38079 344 aa5.37□□□□□ -1.55
NPL4YBR170C POL5P39985 1022 aaKnown RBP5.37□□□□□ -1.55
NPL4YBR170C ECL1P48235 211 aa5.37□□□□□ -1.55
NPL4YBR170C PEX14P53112 341 aa5.37□□□□□ -1.55
NPL4YBR170C TRE2Q08693 809 aa5.37□□□□□ -1.55
NPL4YBR170C ALG6Q12001 544 aaKnown RBP5.37□□□□□ -1.55
NPL4YBR170C RET1P22276 1149 aaKnown RBP5.37□□□□□ -1.55
NPL4YBR170C TRX2P22803 104 aaKnown RBP5.37□□□□□ -1.55
NPL4YBR170C CDC12P32468 407 aaKnown RBP5.37□□□□□ -1.55
NPL4YBR170C ERT1P38140 529 aa5.37□□□□□ -1.55
NPL4YBR170C HSE1P38753 452 aa5.37□□□□□ -1.55
NPL4YBR170C QNS1P38795 714 aaKnown RBP5.37□□□□□ -1.55
NPL4YBR170C YGR045CP53229 120 aa5.37□□□□□ -1.55
NPL4YBR170C SDH1Q00711 640 aa5.37□□□□□ -1.55
NPL4YBR170C NYV1Q12255 253 aa5.37□□□□□ -1.55
NPL4YBR170C SFL1P20134 766 aa5.36□□□□□ -1.55
NPL4YBR170C KIP1P28742 1111 aa5.36□□□□□ -1.55
NPL4YBR170C PLC1P32383 869 aa5.36□□□□□ -1.55
NPL4YBR170C MTC2P34246 357 aa5.36□□□□□ -1.55
NPL4YBR170C MXR1P40029 184 aa5.36□□□□□ -1.55
NPL4YBR170C PEA2P40091 420 aa5.36□□□□□ -1.55
NPL4YBR170C TOK1P40310 691 aa5.36□□□□□ -1.55
NPL4YBR170C TY4A-JP47023 414 aa5.36□□□□□ -1.55
NPL4YBR170C NCE103P53615 221 aa5.36□□□□□ -1.55
NPL4YBR170C YNL034WP53963 612 aa5.36□□□□□ -1.55
NPL4YBR170C YNL018CP53976 612 aa5.36□□□□□ -1.55
NPL4YBR170C VMS1Q04311 632 aaKnown RBP5.36□□□□□ -1.55
NPL4YBR170C AVO1Q08236 1176 aa5.36□□□□□ -1.55
NPL4YBR170C SPO21Q12411 609 aa5.36□□□□□ -1.55
NPL4YBR170C LRG1P35688 1017 aa5.35□□□□□ -1.55
NPL4YBR170C POL12P38121 705 aaPredicted RBP5.35□□□□□ -1.55
NPL4YBR170C GYP8P43570 497 aa5.35□□□□□ -1.55
NPL4YBR170C YJR096WP47137 282 aa5.35□□□□□ -1.55
NPL4YBR170C YGR283CP53336 341 aaPredicted RBP5.35□□□□□ -1.55
NPL4YBR170C SRP1Q02821 542 aaKnown RBP5.35□□□□□ -1.55
NPL4YBR170C RSA3Q05942 220 aaKnown RBP5.35□□□□□ -1.55
NPL4YBR170C YLL054CQ12244 843 aa5.35□□□□□ -1.55
NPL4YBR170C MPD2Q99316 277 aa5.35□□□□□ -1.55
NPL4YBR170C PIF1P07271 859 aa5.34□□□□□ -1.55
NPL4YBR170C ERS1P17261 260 aa5.34□□□□□ -1.55
NPL4YBR170C NPP1P25353 742 aa5.34□□□□□ -1.55
NPL4YBR170C YCR015CP25616 317 aa5.34□□□□□ -1.55
NPL4YBR170C TFC4P33339 1025 aa5.34□□□□□ -1.55
NPL4YBR170C CAF16P43569 289 aa5.34□□□□□ -1.55
NPL4YBR170C PRP43P53131 767 aaKnown RBP5.34□□□□□ -1.55
NPL4YBR170C ATG16Q03818 150 aa5.34□□□□□ -1.55
NPL4YBR170C SST2P11972 698 aaKnown RBP5.34□□□□□ -1.56
NPL4YBR170C REC104P33323 182 aa5.34□□□□□ -1.56
NPL4YBR170C YKL151CP36059 337 aa5.34□□□□□ -1.56
NPL4YBR170C ELA1P53861 379 aaPredicted RBP5.34□□□□□ -1.56
NPL4YBR170C YMR074CQ04773 145 aa5.34□□□□□ -1.56
NPL4YBR170C RSC3Q06639 885 aa5.34□□□□□ -1.56
NPL4YBR170C ELG1Q12050 791 aa5.34□□□□□ -1.56
NPL4YBR170C YEF3P16521 1044 aaKnown RBP5.33□□□□□ -1.56
NPL4YBR170C DPB3P27344 201 aa5.33□□□□□ -1.56
NPL4YBR170C PRP19P32523 503 aaKnown RBP5.33□□□□□ -1.56
NPL4YBR170C STO1P34160 861 aaKnown RBP5.33□□□□□ -1.56
NPL4YBR170C PCM1P38628 557 aaKnown RBP5.33□□□□□ -1.56
NPL4YBR170C GPB2P39717 880 aa5.33□□□□□ -1.56
NPL4YBR170C IES5P40060 125 aa5.33□□□□□ -1.56
NPL4YBR170C YGR021WP53212 290 aa5.33□□□□□ -1.56
NPL4YBR170C ATP25Q03153 612 aa5.33□□□□□ -1.56
NPL4YBR170C HRQ1Q05549 1077 aa5.33□□□□□ -1.56
NPL4YBR170C NSI1Q12457 570 aa5.33□□□□□ -1.56
NPL4YBR170C SLA2P33338 968 aa5.32□□□□□ -1.56
NPL4YBR170C EMC3P36039 253 aa5.32□□□□□ -1.56
NPL4YBR170C CKB2P38930 258 aa5.32□□□□□ -1.56
NPL4YBR170C DUG1P43616 481 aaKnown RBP5.32□□□□□ -1.56
NPL4YBR170C CCM1P48237 864 aaPredicted RBP5.32□□□□□ -1.56
NPL4YBR170C COG8Q04632 607 aa5.32□□□□□ -1.56
NPL4YBR170C GUD1Q07729 489 aa5.32□□□□□ -1.56
NPL4YBR170C ACM1Q08981 209 aa5.32□□□□□ -1.56
NPL4YBR170C DFG16Q99234 619 aa5.32□□□□□ -1.56
NPL4YBR170C MCD4P36051 919 aa5.31□□□□□ -1.56
NPL4YBR170C YBR238CP38330 731 aaKnown RBP5.31□□□□□ -1.56
NPL4YBR170C DAM1P53267 343 aa5.31□□□□□ -1.56
NPL4YBR170C SVL3Q03088 825 aaKnown RBP5.31□□□□□ -1.56
NPL4YBR170C ENV7Q12003 364 aa5.31□□□□□ -1.56
NPL4YBR170C YTM1Q12024 460 aaPredicted RBP5.31□□□□□ -1.56
NPL4YBR170C NKP1Q12493 238 aa5.31□□□□□ -1.56
NPL4YBR170C PRO1P32264 428 aa5.31□□□□□ -1.56
NPL4YBR170C TRZ1P36159 838 aaPredicted RBP5.31□□□□□ -1.56
NPL4YBR170C OAF1P39720 1047 aaPredicted RBP5.31□□□□□ -1.56
Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms