RNA–Protein interactions for RNA: ENST00000641587.1

PHGDH-222, Transcript of phosphoglycerate dehydrogenase, human

Gene PHGDH, Length 566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PHGDH-222	ENST00000641587	NPHP1	O15259	732 aa		13.44	□□□□□ -0.26
PHGDH-222	ENST00000641587	GAS2L2	Q8NHY3	880 aa		13.44	□□□□□ -0.26
PHGDH-222	ENST00000641587	FMNL2	Q96PY5	1086 aa		13.44	□□□□□ -0.26
PHGDH-222	ENST00000641587	SETDB2	Q96T68	719 aa		13.44	□□□□□ -0.26
PHGDH-222	ENST00000641587	CEMIP	Q8WUJ3	1361 aa		13.44	□□□□□ -0.26
PHGDH-222	ENST00000641587	LTBP3	Q9NS15	1303 aa		13.43	□□□□□ -0.26
PHGDH-222	ENST00000641587	SRGN	P10124	158 aa		13.43	□□□□□ -0.26
PHGDH-222	ENST00000641587	CHADL	Q6NUI6	762 aa		13.43	□□□□□ -0.26
PHGDH-222	ENST00000641587	DZIP3	Q86Y13	1208 aa	Known RBP	13.43	□□□□□ -0.26
PHGDH-222	ENST00000641587	PHACTR3	Q96KR7	559 aa		13.43	□□□□□ -0.26
PHGDH-222	ENST00000641587	USP16	Q9Y5T5	823 aa		13.43	□□□□□ -0.26
PHGDH-222	ENST00000641587	BTBD11	A6QL63	1104 aa		13.42	□□□□□ -0.26
PHGDH-222	ENST00000641587	PRKAR2B	P31323	418 aa		13.42	□□□□□ -0.26
PHGDH-222	ENST00000641587	ST5	P78524	1137 aa		13.42	□□□□□ -0.26
PHGDH-222	ENST00000641587	STYK1	Q6J9G0	422 aa		13.42	□□□□□ -0.26
PHGDH-222	ENST00000641587	OLFM4	Q6UX06	510 aa		13.42	□□□□□ -0.26
PHGDH-222	ENST00000641587	CNKSR1	Q969H4	720 aa		13.42	□□□□□ -0.26
PHGDH-222	ENST00000641587	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.42	□□□□□ -0.26
PHGDH-222	ENST00000641587	PDZRN3	Q9UPQ7	1066 aa		13.42	□□□□□ -0.26
PHGDH-222	ENST00000641587	DDX10	Q13206	875 aa	Known RBP	13.41	□□□□□ -0.26
PHGDH-222	ENST00000641587	MASTL	Q96GX5	879 aa		13.41	□□□□□ -0.26
PHGDH-222	ENST00000641587	RSPH6A	Q9H0K4	717 aa		13.41	□□□□□ -0.26
PHGDH-222	ENST00000641587	CREBZF	Q9NS37	354 aa		13.41	□□□□□ -0.26
PHGDH-222	ENST00000641587	ZNF541	Q9H0D2	1346 aa		13.4	□□□□□ -0.26
PHGDH-222	ENST00000641587	NPM2	Q86SE8	214 aa	Known RBP	13.4	□□□□□ -0.26
PHGDH-222	ENST00000641587	SCN4A	P35499	1836 aa		13.39	□□□□□ -0.27
PHGDH-222	ENST00000641587	FAM177B	A6PVY3	158 aa		13.39	□□□□□ -0.27
PHGDH-222	ENST00000641587	MCM10	Q7L590	875 aa		13.39	□□□□□ -0.27
PHGDH-222	ENST00000641587	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.39	□□□□□ -0.27
PHGDH-222	ENST00000641587	C7orf43	Q8WVR3	580 aa		13.39	□□□□□ -0.27
PHGDH-222	ENST00000641587	ZNF277	Q9NRM2	450 aa	Predicted RBP	13.39	□□□□□ -0.27
PHGDH-222	ENST00000641587	NPC1L1	Q9UHC9	1359 aa		13.39	□□□□□ -0.27
PHGDH-222	ENST00000641587	CNTNAP1	P78357	1384 aa		13.38	□□□□□ -0.27
PHGDH-222	ENST00000641587	FOXN1	O15353	648 aa		13.38	□□□□□ -0.27
PHGDH-222	ENST00000641587	DCTN1	Q14203	1278 aa		13.38	□□□□□ -0.27
PHGDH-222	ENST00000641587	CCDC93	Q567U6	631 aa		13.38	□□□□□ -0.27
PHGDH-222	ENST00000641587	TAF1D	Q9H5J8	278 aa	Predicted RBP	13.38	□□□□□ -0.27
PHGDH-222	ENST00000641587	PASK	Q96RG2	1323 aa		13.38	□□□□□ -0.27
PHGDH-222	ENST00000641587	NBPF26	B4DH59	902 aa		13.37	□□□□□ -0.27
PHGDH-222	ENST00000641587	EAPP	Q56P03	285 aa	Predicted RBP	13.37	□□□□□ -0.27
PHGDH-222	ENST00000641587	SOGA3	Q5TF21	947 aa		13.37	□□□□□ -0.27
PHGDH-222	ENST00000641587	DIEXF	Q68CQ4	756 aa	Known RBP	13.37	□□□□□ -0.27
PHGDH-222	ENST00000641587	NBPF10	Q6P3W6	841 aa	Known RBP	13.37	□□□□□ -0.27
PHGDH-222	ENST00000641587	LDHD	Q86WU2	507 aa		13.37	□□□□□ -0.27
PHGDH-222	ENST00000641587	NBPF15	Q8N660	670 aa		13.37	□□□□□ -0.27
PHGDH-222	ENST00000641587	L3MBTL3	Q96JM7	780 aa	Predicted RBP	13.37	□□□□□ -0.27
PHGDH-222	ENST00000641587	ADAMTSL1	Q8N6G6	1762 aa		13.37	□□□□□ -0.27
PHGDH-222	ENST00000641587	NPR1	P16066	1061 aa		13.36	□□□□□ -0.27
PHGDH-222	ENST00000641587	FKBP4	Q02790	459 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
PHGDH-222	ENST00000641587	HLF	Q16534	295 aa		13.36	□□□□□ -0.27
PHGDH-222	ENST00000641587	SLC51A	Q86UW1	340 aa		13.36	□□□□□ -0.27
PHGDH-222	ENST00000641587	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.36	□□□□□ -0.27
PHGDH-222	ENST00000641587	LAMB4	A4D0S4	1761 aa		13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	ABCC12	Q96J65	1359 aa		13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	COL4A5	P29400	1685 aa		13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	KLRG2	A4D1S0	409 aa	Predicted RBP	13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	IQCA1L	A6NCM1	817 aa		13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	SNRPA1	P09661	255 aa	Known RBP	13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	VEGFB	P49765	207 aa		13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	CLEC4G	Q6UXB4	293 aa		13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	ZNF652	Q9Y2D9	606 aa		13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	RNF123	Q5XPI4	1314 aa		13.35	□□□□□ -0.27
PHGDH-222	ENST00000641587	SNED1	Q8TER0	1413 aa		13.34	□□□□□ -0.27
PHGDH-222	ENST00000641587	ITGBL1	O95965	494 aa	Predicted RBP	13.34	□□□□□ -0.27
PHGDH-222	ENST00000641587	MIS18A	Q9NYP9	233 aa		13.34	□□□□□ -0.27
PHGDH-222	ENST00000641587	LTBP1	Q14766	1721 aa		13.33	□□□□□ -0.27
PHGDH-222	ENST00000641587	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.33	□□□□□ -0.28
PHGDH-222	ENST00000641587	EPHX2	P34913	555 aa		13.33	□□□□□ -0.28
PHGDH-222	ENST00000641587	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.33	□□□□□ -0.28
PHGDH-222	ENST00000641587	MAP1S	Q66K74	1059 aa	Predicted RBP	13.33	□□□□□ -0.28
PHGDH-222	ENST00000641587	RTF1	Q92541	710 aa	Known RBP	13.33	□□□□□ -0.28
PHGDH-222	ENST00000641587	HACL1	Q9UJ83	578 aa		13.33	□□□□□ -0.28
PHGDH-222	ENST00000641587	CLEC11A	Q9Y240	323 aa		13.33	□□□□□ -0.28
PHGDH-222	ENST00000641587	TMEM88B	A6NKF7	163 aa		13.32	□□□□□ -0.28
PHGDH-222	ENST00000641587	IARS	P41252	1262 aa	Known RBP	13.32	□□□□□ -0.28
PHGDH-222	ENST00000641587	TPTE2	Q6XPS3	522 aa		13.32	□□□□□ -0.28
PHGDH-222	ENST00000641587	NUTM1	Q86Y26	1132 aa		13.32	□□□□□ -0.28
PHGDH-222	ENST00000641587	SYNE4	Q8N205	404 aa		13.32	□□□□□ -0.28
PHGDH-222	ENST00000641587	NGEF	Q8N5V2	710 aa		13.32	□□□□□ -0.28
PHGDH-222	ENST00000641587	CFAP53	Q96M91	514 aa		13.32	□□□□□ -0.28
PHGDH-222	ENST00000641587	NUP98	P52948	1817 aa		13.32	□□□□□ -0.28
PHGDH-222	ENST00000641587	DLG5	Q8TDM6	1919 aa		13.31	□□□□□ -0.28
PHGDH-222	ENST00000641587	KDM3B	Q7LBC6	1761 aa		13.31	□□□□□ -0.28
PHGDH-222	ENST00000641587	FZD9	O00144	591 aa		13.31	□□□□□ -0.28
PHGDH-222	ENST00000641587	FMR1	Q06787	632 aa	Known RBP eCLIP	13.31	□□□□□ -0.28	8e-7	■■□□□ 12
PHGDH-222	ENST00000641587	GTF2E1	P29083	439 aa	Predicted RBP	13.3	□□□□□ -0.28
PHGDH-222	ENST00000641587	PPP2R1A	P30153	589 aa		13.3	□□□□□ -0.28
PHGDH-222	ENST00000641587	RTKN2	Q8IZC4	609 aa		13.3	□□□□□ -0.28
PHGDH-222	ENST00000641587	CNTROB	Q8N137	903 aa		13.3	□□□□□ -0.28
PHGDH-222	ENST00000641587	NUDC	Q9Y266	331 aa		13.3	□□□□□ -0.28
PHGDH-222	ENST00000641587	CTCF	P49711	727 aa	Predicted RBP	13.29	□□□□□ -0.28
PHGDH-222	ENST00000641587	LBX1	P52954	281 aa		13.29	□□□□□ -0.28
PHGDH-222	ENST00000641587	TTLL7	Q6ZT98	887 aa		13.29	□□□□□ -0.28
PHGDH-222	ENST00000641587	AIDA	Q96BJ3	306 aa		13.29	□□□□□ -0.28
PHGDH-222	ENST00000641587	PRDM10	Q9NQV6	1147 aa		13.29	□□□□□ -0.28
PHGDH-222	ENST00000641587	UBN2	Q6ZU65	1347 aa		13.29	□□□□□ -0.28
PHGDH-222	ENST00000641587	GPT	P24298	496 aa		13.28	□□□□□ -0.28
PHGDH-222	ENST00000641587	ALDH1B1	P30837	517 aa		13.28	□□□□□ -0.28
PHGDH-222	ENST00000641587	TAF7	Q15545	349 aa	Predicted RBP	13.28	□□□□□ -0.28
PHGDH-222	ENST00000641587	CRY2	Q49AN0	593 aa		13.28	□□□□□ -0.28

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