RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
PHGDH-220ENST00000641570 KSR2Q6VAB6 950 aa16.39■□□□□ 0.21
PHGDH-220ENST00000641570 PROM2Q8N271 834 aa16.39■□□□□ 0.21
PHGDH-220ENST00000641570 DNAAF4Q8WXU2 420 aa16.39■□□□□ 0.21
PHGDH-220ENST00000641570 TBC1D2BQ9UPU7 963 aa16.39■□□□□ 0.21
PHGDH-220ENST00000641570 MAP3K2Q9Y2U5 619 aa16.39■□□□□ 0.21
PHGDH-220ENST00000641570 MAP3K15Q6ZN16 1313 aa16.39■□□□□ 0.21
PHGDH-220ENST00000641570 PI4KAP2A4QPH2 592 aa16.38■□□□□ 0.21
PHGDH-220ENST00000641570 CCT4P50991 539 aaKnown RBP16.38■□□□□ 0.21
PHGDH-220ENST00000641570 G2E3Q7L622 706 aa16.38■□□□□ 0.21
PHGDH-220ENST00000641570 ITPRIPQ8IWB1 547 aa16.38■□□□□ 0.21
PHGDH-220ENST00000641570 PI4KAP1Q8N8J0 262 aa16.38■□□□□ 0.21
PHGDH-220ENST00000641570 CLUAP1Q96AJ1 413 aa16.38■□□□□ 0.21
PHGDH-220ENST00000641570 ERVV-1B6SEH8 477 aa16.37■□□□□ 0.21
PHGDH-220ENST00000641570 PLIN1O60240 522 aa16.37■□□□□ 0.21
PHGDH-220ENST00000641570 ZNF827Q17R98 1081 aa16.37■□□□□ 0.21
PHGDH-220ENST00000641570 TTLL7Q6ZT98 887 aa16.37■□□□□ 0.21
PHGDH-220ENST00000641570 AKT1S1Q96B36 256 aa16.37■□□□□ 0.21
PHGDH-220ENST00000641570 COL5A3P25940 1745 aaPredicted RBP16.36■□□□□ 0.21
PHGDH-220ENST00000641570 TRIM27P14373 513 aa16.36■□□□□ 0.21
PHGDH-220ENST00000641570 ARHGEF1Q92888 912 aaKnown RBP16.36■□□□□ 0.21
PHGDH-220ENST00000641570 MYD88Q99836 296 aa16.36■□□□□ 0.21
PHGDH-220ENST00000641570 SRCIN1Q9C0H9 1055 aa16.36■□□□□ 0.21
PHGDH-220ENST00000641570 NARFQ9UHQ1 456 aa16.36■□□□□ 0.21
PHGDH-220ENST00000641570 PDE3AQ14432 1141 aa16.35■□□□□ 0.21
PHGDH-220ENST00000641570 HDAC5Q9UQL6 1122 aa16.35■□□□□ 0.21
PHGDH-220ENST00000641570 F6X3S4 739 aa16.34■□□□□ 0.21
PHGDH-220ENST00000641570 GTF2E1P29083 439 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-220ENST00000641570 USPL1Q5W0Q7 1092 aa16.34■□□□□ 0.21
PHGDH-220ENST00000641570 CLEC4GQ6UXB4 293 aa16.34■□□□□ 0.21
PHGDH-220ENST00000641570 METTL22Q9BUU2 404 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-220ENST00000641570 ANO8Q9HCE9 1232 aaPredicted RBP16.34■□□□□ 0.21
PHGDH-220ENST00000641570 RGL2O15211 777 aa16.33■□□□□ 0.2
PHGDH-220ENST00000641570 GIGYF2Q6Y7W6 1299 aaKnown RBP16.33■□□□□ 0.2
PHGDH-220ENST00000641570 SETDB2Q96T68 719 aa16.33■□□□□ 0.2
PHGDH-220ENST00000641570 C9orf78Q9NZ63 289 aaPredicted RBP16.33■□□□□ 0.2
PHGDH-220ENST00000641570 USP42Q9H9J4 1324 aaKnown RBP16.33■□□□□ 0.2
PHGDH-220ENST00000641570 PXDNLA1KZ92 1463 aa16.33■□□□□ 0.2
PHGDH-220ENST00000641570 RREB1Q92766 1687 aa16.33■□□□□ 0.2
PHGDH-220ENST00000641570 CAMTA2O94983 1202 aa16.32■□□□□ 0.2
PHGDH-220ENST00000641570 HSP90B1P14625 803 aaKnown RBP16.32■□□□□ 0.2
PHGDH-220ENST00000641570 PARP10Q53GL7 1025 aa16.32■□□□□ 0.2
PHGDH-220ENST00000641570 BICDL1Q6ZP65 573 aa16.32■□□□□ 0.2
PHGDH-220ENST00000641570 PPP1R42Q7Z4L9 355 aa16.32■□□□□ 0.2
PHGDH-220ENST00000641570 TAF1LQ8IZX4 1826 aa16.32■□□□□ 0.2
PHGDH-220ENST00000641570 LINS1Q8NG48 757 aa16.32■□□□□ 0.2
PHGDH-220ENST00000641570 DDX19BQ9UMR2 479 aa16.32■□□□□ 0.2
PHGDH-220ENST00000641570 NIP7Q9Y221 180 aaKnown RBP eCLIP16.32■□□□□ 0.2
PHGDH-220ENST00000641570 ADCY9O60503 1353 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 ABCC4O15439 1325 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 PNPLA7Q6ZV29 1317 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 ALDH1L1O75891 902 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 GPTP24298 496 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 TCIRG1Q13488 830 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 LRP10Q7Z4F1 713 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 NLGN1Q8N2Q7 840 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 PANK1Q8TE04 598 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 CWC25Q9NXE8 425 aaPredicted RBP16.31■□□□□ 0.2
PHGDH-220ENST00000641570 SRP68Q9UHB9 627 aaKnown RBP16.31■□□□□ 0.2
PHGDH-220ENST00000641570 NUP188Q5SRE5 1749 aa16.31■□□□□ 0.2
PHGDH-220ENST00000641570 CACNA1FO60840 1977 aa16.3■□□□□ 0.2
PHGDH-220ENST00000641570 ATP5J2-PTCD1G3V325 749 aa16.3■□□□□ 0.2
PHGDH-220ENST00000641570 R3HDM1Q15032 1099 aaKnown RBP16.3■□□□□ 0.2
PHGDH-220ENST00000641570 TMEM57Q8N5G2 664 aa16.3■□□□□ 0.2
PHGDH-220ENST00000641570 NYXQ9GZU5 481 aa16.3■□□□□ 0.2
PHGDH-220ENST00000641570 ATP10DQ9P241 1426 aa16.29■□□□□ 0.2
PHGDH-220ENST00000641570 GNAI3P08754 354 aa16.29■□□□□ 0.2
PHGDH-220ENST00000641570 POLD1P28340 1107 aa16.29■□□□□ 0.2
PHGDH-220ENST00000641570 MVPQ14764 893 aaKnown RBP16.29■□□□□ 0.2
PHGDH-220ENST00000641570 SMIM5Q71RC9 77 aa16.29■□□□□ 0.2
PHGDH-220ENST00000641570 NBPF5PQ86XG9 351 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-220ENST00000641570 COL23A1Q86Y22 540 aaPredicted RBP16.29■□□□□ 0.2
PHGDH-220ENST00000641570 CCDC191Q8NCU4 936 aa16.29■□□□□ 0.2
PHGDH-220ENST00000641570 SLC16A10Q8TF71 515 aa16.29■□□□□ 0.2
PHGDH-220ENST00000641570 COG6Q9Y2V7 657 aa16.29■□□□□ 0.2
PHGDH-220ENST00000641570 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
PHGDH-220ENST00000641570 FAM177BA6PVY3 158 aa16.28■□□□□ 0.2
PHGDH-220ENST00000641570 HLFQ16534 295 aa16.28■□□□□ 0.2
PHGDH-220ENST00000641570 UTP14AQ9BVJ6 771 aaKnown RBP16.28■□□□□ 0.2
PHGDH-220ENST00000641570 CARMIL3Q8ND23 1372 aa16.27■□□□□ 0.2
PHGDH-220ENST00000641570 UBTFL1P0CB47 393 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-220ENST00000641570 IRX6P78412 446 aaPredicted RBP16.27■□□□□ 0.2
PHGDH-220ENST00000641570 ST5P78524 1137 aa16.27■□□□□ 0.2
PHGDH-220ENST00000641570 BEND3Q5T5X7 828 aa16.27■□□□□ 0.2
PHGDH-220ENST00000641570 INTS3Q68E01 1043 aaKnown RBP16.27■□□□□ 0.2
PHGDH-220ENST00000641570 TRMT112Q9UI30 125 aaKnown RBP16.27■□□□□ 0.2
PHGDH-220ENST00000641570 NEURL1BA8MQ27 555 aa16.26■□□□□ 0.19
PHGDH-220ENST00000641570 GYS1P13807 737 aa16.26■□□□□ 0.19
PHGDH-220ENST00000641570 CWF19L2Q2TBE0 894 aaKnown RBP16.26■□□□□ 0.19
PHGDH-220ENST00000641570 MSL1Q68DK7 614 aa16.26■□□□□ 0.19
PHGDH-220ENST00000641570 TPTE2Q6XPS3 522 aa16.26■□□□□ 0.19
PHGDH-220ENST00000641570 RNF123Q5XPI4 1314 aa16.25■□□□□ 0.19
PHGDH-220ENST00000641570 PSDA5PKW4 1024 aaPredicted RBP16.25■□□□□ 0.19
PHGDH-220ENST00000641570 AAMPQ13685 434 aa16.25■□□□□ 0.19
PHGDH-220ENST00000641570 FKBP8Q14318 412 aa16.25■□□□□ 0.19
PHGDH-220ENST00000641570 TBC1D9BQ66K14 1250 aa16.25■□□□□ 0.19
PHGDH-220ENST00000641570 CNBD1Q8NA66 436 aa16.25■□□□□ 0.19
PHGDH-220ENST00000641570 MYH14Q7Z406 1995 aaKnown RBP16.25■□□□□ 0.19
PHGDH-220ENST00000641570 UBR3Q6ZT12 1888 aa16.25■□□□□ 0.19
PHGDH-220ENST00000641570 SCN7AQ01118 1682 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms