RNA–Protein interactions for RNA: ENST00000639487.1

RTTN-215, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,175 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-215ENST00000639487 CHMP4BQ9H444 224 aaKnown RBP8.53□□□□□ -1.04
RTTN-215ENST00000639487 HDAC5Q9UQL6 1122 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 CAMTA2O94983 1202 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 AMPHP49418 695 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 MYH16Q9H6N6 1097 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 PLXNB2O15031 1838 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 CIAO1O76071 339 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 PIGBQ92521 554 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 GGNBP2Q9H3C7 697 aa8.53□□□□□ -1.04
RTTN-215ENST00000639487 ZMYM6O95789 1325 aa8.52□□□□□ -1.04
RTTN-215ENST00000639487 MAP3K15Q6ZN16 1313 aa8.52□□□□□ -1.04
RTTN-215ENST00000639487 SCN9AQ15858 1988 aa8.52□□□□□ -1.04
RTTN-215ENST00000639487 ATP6V1AP38606 617 aa8.52□□□□□ -1.05
RTTN-215ENST00000639487 C14orf37Q86TY3 774 aa8.52□□□□□ -1.05
RTTN-215ENST00000639487 PGAP2Q9UHJ9 254 aa8.52□□□□□ -1.05
RTTN-215ENST00000639487 SALL2Q9Y467 1007 aaPredicted RBP8.52□□□□□ -1.05
RTTN-215ENST00000639487 MTMR14Q8NCE2 650 aa8.52□□□□□ -1.05
RTTN-215ENST00000639487 SLC4A9Q96Q91 983 aa8.52□□□□□ -1.05
RTTN-215ENST00000639487 PSMD1Q99460 953 aa8.52□□□□□ -1.05
RTTN-215ENST00000639487 ZRANB1Q9UGI0 708 aa8.52□□□□□ -1.05
RTTN-215ENST00000639487 SUGT1Q9Y2Z0 365 aa8.52□□□□□ -1.05
RTTN-215ENST00000639487 PDE3AQ14432 1141 aa8.51□□□□□ -1.05
RTTN-215ENST00000639487 SLC15A2Q16348 729 aa8.51□□□□□ -1.05
RTTN-215ENST00000639487 DUSP27Q5VZP5 1158 aa8.51□□□□□ -1.05
RTTN-215ENST00000639487 PLBD2Q8NHP8 589 aa8.51□□□□□ -1.05
RTTN-215ENST00000639487 C7orf43Q8WVR3 580 aa8.51□□□□□ -1.05
RTTN-215ENST00000639487 MYH1P12882 1939 aa8.51□□□□□ -1.05
RTTN-215ENST00000639487 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.51□□□□□ -1.05
RTTN-215ENST00000639487 HIRIP3Q9BW71 556 aaPredicted RBP8.51□□□□□ -1.05
RTTN-215ENST00000639487 FANCIQ9NVI1 1328 aa8.51□□□□□ -1.05
RTTN-215ENST00000639487 MED23Q9ULK4 1368 aa8.5□□□□□ -1.05
RTTN-215ENST00000639487 DHX37Q8IY37 1157 aaKnown RBP8.5□□□□□ -1.05
RTTN-215ENST00000639487 CFHR5Q9BXR6 569 aa8.5□□□□□ -1.05
RTTN-215ENST00000639487 TPRNQ4KMQ1 711 aa8.5□□□□□ -1.05
RTTN-215ENST00000639487 NYXQ9GZU5 481 aa8.5□□□□□ -1.05
RTTN-215ENST00000639487 SYNPO2Q9UMS6 1093 aa8.5□□□□□ -1.05
RTTN-215ENST00000639487 ZNF496Q96IT1 587 aaPredicted RBP8.49□□□□□ -1.05
RTTN-215ENST00000639487 CCDC87Q9NVE4 849 aa8.49□□□□□ -1.05
RTTN-215ENST00000639487 H7C1W4 665 aa8.49□□□□□ -1.05
RTTN-215ENST00000639487 NOP58Q9Y2X3 529 aaKnown RBP8.49□□□□□ -1.05
RTTN-215ENST00000639487 NOM1Q5C9Z4 860 aaKnown RBP8.48□□□□□ -1.05
RTTN-215ENST00000639487 CCDC191Q8NCU4 936 aa8.48□□□□□ -1.05
RTTN-215ENST00000639487 BCL2L12Q9HB09 334 aa8.48□□□□□ -1.05
RTTN-215ENST00000639487 ANP32CO43423 234 aa8.48□□□□□ -1.05
RTTN-215ENST00000639487 PCCAP05165 728 aaPredicted RBP8.48□□□□□ -1.05
RTTN-215ENST00000639487 FGD1P98174 961 aa8.48□□□□□ -1.05
RTTN-215ENST00000639487 L3MBTL3Q96JM7 780 aaPredicted RBP8.48□□□□□ -1.05
RTTN-215ENST00000639487 COL4A5P29400 1685 aa8.48□□□□□ -1.05
RTTN-215ENST00000639487 MYO5AQ9Y4I1 1855 aaKnown RBP8.48□□□□□ -1.05
RTTN-215ENST00000639487 MYH2Q9UKX2 1941 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 LOC102724428A0A0B4J2F2 783 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 SIK1P57059 783 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 POLA2Q14181 598 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 LINC00116Q8NCU8 138 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 HHIPL1Q96JK4 782 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 GINM1Q9NU53 330 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 POLRMTO00411 1230 aaKnown RBP8.47□□□□□ -1.05
RTTN-215ENST00000639487 VAMP4O75379 141 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 C1orf141Q5JVX7 400 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 GIGYF2Q6Y7W6 1299 aaKnown RBP8.47□□□□□ -1.05
RTTN-215ENST00000639487 TOM1L2Q6ZVM7 507 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 CERS3Q8IU89 383 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 MRPL50Q8N5N7 158 aaKnown RBP8.47□□□□□ -1.05
RTTN-215ENST00000639487 NID2Q14112 1375 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 NLGN1Q8N2Q7 840 aa8.47□□□□□ -1.05
RTTN-215ENST00000639487 PITPNM2Q9BZ72 1349 aa8.46□□□□□ -1.05
RTTN-215ENST00000639487 SIP14410 1827 aa8.46□□□□□ -1.05
RTTN-215ENST00000639487 TXNRD1Q16881 649 aa8.46□□□□□ -1.05
RTTN-215ENST00000639487 TAF7LQ5H9L4 462 aa8.46□□□□□ -1.05
RTTN-215ENST00000639487 BCANQ96GW7 911 aa8.46□□□□□ -1.05
RTTN-215ENST00000639487 SEMA3EO15041 775 aa8.46□□□□□ -1.06
RTTN-215ENST00000639487 NTSR2O95665 410 aa8.46□□□□□ -1.06
RTTN-215ENST00000639487 TMOD3Q9NYL9 352 aa8.46□□□□□ -1.06
RTTN-215ENST00000639487 DBF4Q9UBU7 674 aaPredicted RBP8.46□□□□□ -1.06
RTTN-215ENST00000639487 ZNF804BA4D1E1 1349 aa8.45□□□□□ -1.06
RTTN-215ENST00000639487 PRKAR2BP31323 418 aa8.45□□□□□ -1.06
RTTN-215ENST00000639487 U2SURPO15042 1029 aaKnown RBP8.45□□□□□ -1.06
RTTN-215ENST00000639487 SULT6B1Q6IMI4 303 aa8.45□□□□□ -1.06
RTTN-215ENST00000639487 ZBED3Q96IU2 234 aaPredicted RBP8.45□□□□□ -1.06
RTTN-215ENST00000639487 PHACTR3Q96KR7 559 aa8.45□□□□□ -1.06
RTTN-215ENST00000639487 A0A0U1RQG5 324 aaPredicted RBP8.44□□□□□ -1.06
RTTN-215ENST00000639487 ITPK1Q13572 414 aa8.44□□□□□ -1.06
RTTN-215ENST00000639487 MEX3CQ5U5Q3 659 aaKnown RBP8.44□□□□□ -1.06
RTTN-215ENST00000639487 YTHDC1Q96MU7 727 aaKnown RBP8.44□□□□□ -1.06
RTTN-215ENST00000639487 STARD3NLO95772 234 aa8.44□□□□□ -1.06
RTTN-215ENST00000639487 ZNF530Q6P9A1 599 aaPredicted RBP8.44□□□□□ -1.06
RTTN-215ENST00000639487 DDX17Q92841 729 aaKnown RBP8.44□□□□□ -1.06
RTTN-215ENST00000639487 C8orf37Q96NL8 207 aa8.44□□□□□ -1.06
RTTN-215ENST00000639487 METTL22Q9BUU2 404 aaPredicted RBP8.44□□□□□ -1.06
RTTN-215ENST00000639487 BRIP1Q9BX63 1249 aa8.44□□□□□ -1.06
RTTN-215ENST00000639487 TBC1D2Q9BYX2 928 aa8.44□□□□□ -1.06
RTTN-215ENST00000639487 ADAMTS8Q9UP79 889 aa8.44□□□□□ -1.06
RTTN-215ENST00000639487 MYO3BQ8WXR4 1341 aa8.44□□□□□ -1.06
RTTN-215ENST00000639487 SALL3Q9BXA9 1300 aa8.44□□□□□ -1.06
RTTN-215ENST00000639487 ROBO3Q96MS0 1386 aa8.43□□□□□ -1.06
RTTN-215ENST00000639487 KCNQ2O43526 872 aa8.43□□□□□ -1.06
RTTN-215ENST00000639487 MAP3K10Q02779 954 aa8.43□□□□□ -1.06
RTTN-215ENST00000639487 CCDC30Q5VVM6 783 aa8.43□□□□□ -1.06
RTTN-215ENST00000639487 ZNF652Q9Y2D9 606 aa8.43□□□□□ -1.06
RTTN-215ENST00000639487 HDLBPQ00341 1268 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms