RNA–Protein interactions for RNA: ENST00000636314.1

CLN6-214, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 3 BASIC

Gene CLN6, Length 442 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-214ENST00000636314 THUMPD2Q9BTF0 503 aaKnown RBP24.22■■□□□ 1.47
CLN6-214ENST00000636314 FER1L6Q2WGJ9 1857 aa24.21■■□□□ 1.47
CLN6-214ENST00000636314 A1BGP04217 495 aa24.21■■□□□ 1.47
CLN6-214ENST00000636314 ZNF622Q969S3 477 aaKnown RBP eCLIP24.21■■□□□ 1.47
CLN6-214ENST00000636314 MIS18AQ9NYP9 233 aa24.21■■□□□ 1.47
CLN6-214ENST00000636314 USP16Q9Y5T5 823 aa24.21■■□□□ 1.47
CLN6-214ENST00000636314 PCNTO95613 3336 aa24.2■■□□□ 1.47
CLN6-214ENST00000636314 PRAMEF22A3QJZ6 481 aa24.2■■□□□ 1.46
CLN6-214ENST00000636314 NFKBIEO00221 500 aa24.2■■□□□ 1.46
CLN6-214ENST00000636314 COL13A1Q5TAT6 717 aaPredicted RBP24.2■■□□□ 1.46
CLN6-214ENST00000636314 TBC1D9BQ66K14 1250 aa24.2■■□□□ 1.46
CLN6-214ENST00000636314 ZNF219Q9P2Y4 722 aaPredicted RBP24.2■■□□□ 1.46
CLN6-214ENST00000636314 BCORQ6W2J9 1755 aa24.2■■□□□ 1.46
CLN6-214ENST00000636314 RIPK4P57078 832 aa24.19■■□□□ 1.46
CLN6-214ENST00000636314 CCDC146Q8IYE0 955 aa24.19■■□□□ 1.46
CLN6-214ENST00000636314 LMOD3Q0VAK6 560 aa24.18■■□□□ 1.46
CLN6-214ENST00000636314 CCDC24Q8N4L8 307 aa24.18■■□□□ 1.46
CLN6-214ENST00000636314 TBC1D2BQ9UPU7 963 aa24.18■■□□□ 1.46
CLN6-214ENST00000636314 PDE6BP35913 854 aa24.17■■□□□ 1.46
CLN6-214ENST00000636314 TMPOP42166 694 aaKnown RBP24.17■■□□□ 1.46
CLN6-214ENST00000636314 C21orf2O43822 256 aa24.16■■□□□ 1.46
CLN6-214ENST00000636314 PIP4K2AP48426 406 aaPredicted RBP24.16■■□□□ 1.46
CLN6-214ENST00000636314 BRIP1Q9BX63 1249 aa24.16■■□□□ 1.46
CLN6-214ENST00000636314 PDZRN3Q9UPQ7 1066 aa24.16■■□□□ 1.46
CLN6-214ENST00000636314 NPHP1O15259 732 aa24.15■■□□□ 1.46
CLN6-214ENST00000636314 PRR5LQ6MZQ0 368 aa24.15■■□□□ 1.46
CLN6-214ENST00000636314 DPY19L2Q6NUT2 758 aa24.15■■□□□ 1.46
CLN6-214ENST00000636314 RUNDC1Q96C34 613 aa24.15■■□□□ 1.46
CLN6-214ENST00000636314 ARFGEF2Q9Y6D5 1785 aa24.15■■□□□ 1.46
CLN6-214ENST00000636314 SLX4Q8IY92 1834 aa24.14■■□□□ 1.46
CLN6-214ENST00000636314 ZNF316A6NFI3 1004 aaPredicted RBP24.14■■□□□ 1.45
CLN6-214ENST00000636314 DZIP3Q86Y13 1208 aaKnown RBP24.14■■□□□ 1.45
CLN6-214ENST00000636314 RRP7AQ9Y3A4 280 aaKnown RBP24.14■■□□□ 1.45
CLN6-214ENST00000636314 CAPN15O75808 1086 aa24.13■■□□□ 1.45
CLN6-214ENST00000636314 ERFEQ4G0M1 354 aa24.13■■□□□ 1.45
CLN6-214ENST00000636314 ADAMTS8Q9UP79 889 aa24.13■■□□□ 1.45
CLN6-214ENST00000636314 CAMTA2O94983 1202 aa24.12■■□□□ 1.45
CLN6-214ENST00000636314 EIF4A1P60842 406 aaKnown RBP24.12■■□□□ 1.45
CLN6-214ENST00000636314 NEUROD2Q15784 382 aa24.12■■□□□ 1.45
CLN6-214ENST00000636314 SETDB2Q96T68 719 aa24.12■■□□□ 1.45
CLN6-214ENST00000636314 TSPYL4Q9UJ04 414 aa24.12■■□□□ 1.45
CLN6-214ENST00000636314 POTECB2RU33 542 aa24.11■■□□□ 1.45
CLN6-214ENST00000636314 TNS4Q8IZW8 715 aa24.11■■□□□ 1.45
CLN6-214ENST00000636314 CNBD1Q8NA66 436 aa24.11■■□□□ 1.45
CLN6-214ENST00000636314 ST5P78524 1137 aa24.1■■□□□ 1.45
CLN6-214ENST00000636314 NBPF26B4DH59 902 aa24.09■■□□□ 1.45
CLN6-214ENST00000636314 HSPA1AP0DMV8 641 aaKnown RBP24.09■■□□□ 1.45
CLN6-214ENST00000636314 HSPA1BP0DMV9 641 aaKnown RBP24.09■■□□□ 1.45
CLN6-214ENST00000636314 NBPF10Q6P3W6 841 aaKnown RBP24.09■■□□□ 1.45
CLN6-214ENST00000636314 NBPF15Q8N660 670 aa24.09■■□□□ 1.45
CLN6-214ENST00000636314 TAOK3Q9H2K8 898 aa24.09■■□□□ 1.45
CLN6-214ENST00000636314 CNKSR1Q969H4 720 aa24.08■■□□□ 1.45
CLN6-214ENST00000636314 BABAM1Q9NWV8 329 aa24.07■■□□□ 1.44
CLN6-214ENST00000636314 ZNF652Q9Y2D9 606 aa24.07■■□□□ 1.44
CLN6-214ENST00000636314 STYK1Q6J9G0 422 aa24.06■■□□□ 1.44
CLN6-214ENST00000636314 PRPF40BQ6NWY9 871 aaKnown RBP24.06■■□□□ 1.44
CLN6-214ENST00000636314 LTBP3Q9NS15 1303 aa24.06■■□□□ 1.44
CLN6-214ENST00000636314 MASTLQ96GX5 879 aa24.05■■□□□ 1.44
CLN6-214ENST00000636314 DDNO94850 711 aaPredicted RBP24.04■■□□□ 1.44
CLN6-214ENST00000636314 SRGNP10124 158 aa24.04■■□□□ 1.44
CLN6-214ENST00000636314 SOGA3Q5TF21 947 aa24.04■■□□□ 1.44
CLN6-214ENST00000636314 CLEC4GQ6UXB4 293 aa24.04■■□□□ 1.44
CLN6-214ENST00000636314 TRIM35Q9UPQ4 493 aa24.04■■□□□ 1.44
CLN6-214ENST00000636314 CHADLQ6NUI6 762 aa24.03■■□□□ 1.44
CLN6-214ENST00000636314 NBPF5PQ86XG9 351 aaPredicted RBP24.02■■□□□ 1.44
CLN6-214ENST00000636314 SCN4AP35499 1836 aa24.02■■□□□ 1.44
CLN6-214ENST00000636314 ERBB4Q15303 1308 aa24.02■■□□□ 1.44
CLN6-214ENST00000636314 RGL2O15211 777 aa24.01■■□□□ 1.43
CLN6-214ENST00000636314 NGEFQ8N5V2 710 aa24.01■■□□□ 1.43
CLN6-214ENST00000636314 LAS1LQ9Y4W2 734 aaKnown RBP24.01■■□□□ 1.43
CLN6-214ENST00000636314 ANP32CO43423 234 aa24■■□□□ 1.43
CLN6-214ENST00000636314 POTEIP0CG38 1075 aa24■■□□□ 1.43
CLN6-214ENST00000636314 POTEJP0CG39 1038 aa24■■□□□ 1.43
CLN6-214ENST00000636314 MYL6BP14649 208 aa24■■□□□ 1.43
CLN6-214ENST00000636314 MKRN1Q9UHC7 482 aaKnown RBP24■■□□□ 1.43
CLN6-214ENST00000636314 NUP98P52948 1817 aa23.99■■□□□ 1.43
CLN6-214ENST00000636314 APAF1O14727 1248 aa23.99■■□□□ 1.43
CLN6-214ENST00000636314 KIF6Q6ZMV9 814 aa23.99■■□□□ 1.43
CLN6-214ENST00000636314 CREBZFQ9NS37 354 aa23.99■■□□□ 1.43
CLN6-214ENST00000636314 CHL1O00533 1208 aa23.98■■□□□ 1.43
CLN6-214ENST00000636314 EIF2S2P20042 333 aaKnown RBP23.98■■□□□ 1.43
CLN6-214ENST00000636314 CCDC184Q52MB2 194 aa23.98■■□□□ 1.43
CLN6-214ENST00000636314 CCDC93Q567U6 631 aa23.98■■□□□ 1.43
CLN6-214ENST00000636314 NIP7Q9Y221 180 aaKnown RBP eCLIP23.98■■□□□ 1.43
CLN6-214ENST00000636314 MAP3K15Q6ZN16 1313 aa23.96■■□□□ 1.43
CLN6-214ENST00000636314 IQCA1LA6NCM1 817 aa23.96■■□□□ 1.43
CLN6-214ENST00000636314 NPR1P16066 1061 aa23.96■■□□□ 1.43
CLN6-214ENST00000636314 HLFQ16534 295 aa23.96■■□□□ 1.43
CLN6-214ENST00000636314 FAM177BA6PVY3 158 aa23.95■■□□□ 1.42
CLN6-214ENST00000636314 ERVV-1B6SEH8 477 aa23.95■■□□□ 1.42
CLN6-214ENST00000636314 TTLL7Q6ZT98 887 aa23.95■■□□□ 1.42
CLN6-214ENST00000636314 MRS2Q9HD23 443 aa23.94■■□□□ 1.42
CLN6-214ENST00000636314 FKBP4Q02790 459 aaKnown RBP eCLIP23.93■■□□□ 1.42
CLN6-214ENST00000636314 CALD1Q05682 793 aaKnown RBP23.93■■□□□ 1.42
CLN6-214ENST00000636314 KRT24Q2M2I5 525 aa23.93■■□□□ 1.42
CLN6-214ENST00000636314 TPTE2Q6XPS3 522 aa23.93■■□□□ 1.42
CLN6-214ENST00000636314 LDHDQ86WU2 507 aa23.93■■□□□ 1.42
CLN6-214ENST00000636314 C7orf43Q8WVR3 580 aa23.93■■□□□ 1.42
CLN6-214ENST00000636314 CFAP44Q96MT7 982 aa23.93■■□□□ 1.42
CLN6-214ENST00000636314 ZBTB3Q9H5J0 574 aa23.93■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms