RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 TTC41PQ6P2S7 1318 aa9.78□□□□□ -0.84
GPC3-204ENST00000631057 ABCC6O95255 1503 aa9.78□□□□□ -0.84
GPC3-204ENST00000631057 GIGYF1O75420 1035 aaPredicted RBP9.78□□□□□ -0.84
GPC3-204ENST00000631057 ZNF445P59923 1031 aa9.78□□□□□ -0.84
GPC3-204ENST00000631057 OS9Q13438 667 aaPredicted RBP9.78□□□□□ -0.84
GPC3-204ENST00000631057 NKX1-1Q15270 411 aaPredicted RBP9.78□□□□□ -0.84
GPC3-204ENST00000631057 KSR2Q6VAB6 950 aa9.78□□□□□ -0.84
GPC3-204ENST00000631057 ERC1Q8IUD2 1116 aa9.78□□□□□ -0.84
GPC3-204ENST00000631057 GPATCH3Q96I76 525 aa9.78□□□□□ -0.84
GPC3-204ENST00000631057 RRAGDQ9NQL2 400 aaPredicted RBP9.78□□□□□ -0.84
GPC3-204ENST00000631057 HYPKQ9NX55 129 aa9.78□□□□□ -0.84
GPC3-204ENST00000631057 PALD1Q9ULE6 856 aa9.78□□□□□ -0.84
GPC3-204ENST00000631057 RAD50Q92878 1312 aa9.78□□□□□ -0.84
GPC3-204ENST00000631057 GLRX3O76003 335 aaKnown RBP9.77□□□□□ -0.85
GPC3-204ENST00000631057 DDX58O95786 925 aaKnown RBP9.77□□□□□ -0.85
GPC3-204ENST00000631057 HSPA4P34932 840 aa9.77□□□□□ -0.85
GPC3-204ENST00000631057 HSPA2P54652 639 aa9.77□□□□□ -0.85
GPC3-204ENST00000631057 PKP1Q13835 747 aa9.77□□□□□ -0.85
GPC3-204ENST00000631057 ANP32BQ92688 251 aaKnown RBP9.77□□□□□ -0.85
GPC3-204ENST00000631057 ORAI2Q96SN7 254 aa9.77□□□□□ -0.85
GPC3-204ENST00000631057 C9orf78Q9NZ63 289 aaPredicted RBP9.77□□□□□ -0.85
GPC3-204ENST00000631057 MAP3K2Q9Y2U5 619 aa9.77□□□□□ -0.85
GPC3-204ENST00000631057 ZDHHC9Q9Y397 364 aa9.77□□□□□ -0.85
GPC3-204ENST00000631057 C5P01031 1676 aa9.77□□□□□ -0.85
GPC3-204ENST00000631057 SGSM2O43147 1006 aa9.76□□□□□ -0.85
GPC3-204ENST00000631057 BRD1O95696 1058 aa9.76□□□□□ -0.85
GPC3-204ENST00000631057 MBD3O95983 291 aa9.76□□□□□ -0.85
GPC3-204ENST00000631057 ANXA1P04083 346 aa9.76□□□□□ -0.85
GPC3-204ENST00000631057 CCDC173Q0VFZ6 552 aa9.76□□□□□ -0.85
GPC3-204ENST00000631057 KIAA1211Q6ZU35 1233 aa9.76□□□□□ -0.85
GPC3-204ENST00000631057 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.76□□□□□ -0.853e-7■■■□□ 19
GPC3-204ENST00000631057 KRT28Q7Z3Y7 464 aa9.76□□□□□ -0.85
GPC3-204ENST00000631057 PROSER2Q86WR7 435 aaPredicted RBP9.76□□□□□ -0.85
GPC3-204ENST00000631057 CLASRPQ8N2M8 674 aaKnown RBP9.76□□□□□ -0.85
GPC3-204ENST00000631057 RUFY2Q8WXA3 655 aa9.76□□□□□ -0.85
GPC3-204ENST00000631057 TRIM44Q96DX7 344 aaPredicted RBP9.76□□□□□ -0.85
GPC3-204ENST00000631057 AFDNP55196 1824 aaKnown RBP9.76□□□□□ -0.85
GPC3-204ENST00000631057 NCLP19338 710 aaKnown RBP9.75□□□□□ -0.85
GPC3-204ENST00000631057 CLCN1P35523 988 aa9.75□□□□□ -0.85
GPC3-204ENST00000631057 NASPP49321 788 aaPredicted RBP9.75□□□□□ -0.85
GPC3-204ENST00000631057 ZSCAN23Q3MJ62 389 aa9.75□□□□□ -0.85
GPC3-204ENST00000631057 CAVIN1Q6NZI2 390 aaKnown RBP9.75□□□□□ -0.85
GPC3-204ENST00000631057 LINS1Q8NG48 757 aa9.75□□□□□ -0.85
GPC3-204ENST00000631057 DDX21Q9NR30 783 aaKnown RBP eCLIP9.75□□□□□ -0.85
GPC3-204ENST00000631057 C1orf167Q5SNV9 1468 aa9.75□□□□□ -0.85
GPC3-204ENST00000631057 PLEKHG2Q9H7P9 1386 aa9.75□□□□□ -0.85
GPC3-204ENST00000631057 PRPF40AO75400 957 aaKnown RBP9.75□□□□□ -0.85
GPC3-204ENST00000631057 XPCQ01831 940 aaPredicted RBP9.75□□□□□ -0.85
GPC3-204ENST00000631057 LSG1Q9H089 658 aaKnown RBP9.75□□□□□ -0.85
GPC3-204ENST00000631057 C19orf44Q9H6X5 657 aa9.75□□□□□ -0.85
GPC3-204ENST00000631057 DIAPH3Q9NSV4 1193 aa9.75□□□□□ -0.85
GPC3-204ENST00000631057 ECHDC1Q9NTX5 307 aa9.75□□□□□ -0.85
GPC3-204ENST00000631057 COL18A1P39060 1754 aa9.75□□□□□ -0.85
GPC3-204ENST00000631057 UTYO14607 1347 aa9.74□□□□□ -0.85
GPC3-204ENST00000631057 PLEKHG5O94827 1062 aa9.74□□□□□ -0.85
GPC3-204ENST00000631057 MAP4K4O95819 1239 aaPredicted RBP9.74□□□□□ -0.85
GPC3-204ENST00000631057 IFIT2P09913 472 aaKnown RBP9.74□□□□□ -0.85
GPC3-204ENST00000631057 PROSER3Q2NL68 480 aa9.74□□□□□ -0.85
GPC3-204ENST00000631057 RAPGEF4Q8WZA2 1011 aa9.74□□□□□ -0.85
GPC3-204ENST00000631057 PPP1R9BQ96SB3 815 aa9.74□□□□□ -0.85
GPC3-204ENST00000631057 UPF3BQ9BZI7 483 aaKnown RBP9.74□□□□□ -0.85
GPC3-204ENST00000631057 ERBB3P21860 1342 aa9.74□□□□□ -0.85
GPC3-204ENST00000631057 WDR33Q9C0J8 1336 aaKnown RBP9.74□□□□□ -0.85
GPC3-204ENST00000631057 PKD1L3Q7Z443 1732 aa9.74□□□□□ -0.85
GPC3-204ENST00000631057 ESPNB1AK53 854 aa9.73□□□□□ -0.85
GPC3-204ENST00000631057 GRM8O00222 908 aa9.73□□□□□ -0.85
GPC3-204ENST00000631057 HIP1O00291 1037 aa9.73□□□□□ -0.85
GPC3-204ENST00000631057 NOL8Q76FK4 1167 aaKnown RBP9.73□□□□□ -0.85
GPC3-204ENST00000631057 GPT2Q8TD30 523 aa9.73□□□□□ -0.85
GPC3-204ENST00000631057 IL25Q9H293 177 aa9.73□□□□□ -0.85
GPC3-204ENST00000631057 SNX14Q9Y5W7 946 aa9.73□□□□□ -0.85
GPC3-204ENST00000631057 LAMB4A4D0S4 1761 aa9.73□□□□□ -0.85
GPC3-204ENST00000631057 STRCQ7RTU9 1775 aa9.73□□□□□ -0.85
GPC3-204ENST00000631057 G3BP1Q13283 466 aaKnown RBP eCLIP9.72□□□□□ -0.85
GPC3-204ENST00000631057 LARP1Q6PKG0 1096 aaKnown RBP9.72□□□□□ -0.85
GPC3-204ENST00000631057 CWC27Q6UX04 472 aaKnown RBP9.72□□□□□ -0.85
GPC3-204ENST00000631057 CHRDL2Q6WN34 429 aa9.72□□□□□ -0.85
GPC3-204ENST00000631057 EVI5LQ96CN4 794 aa9.72□□□□□ -0.85
GPC3-204ENST00000631057 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.72□□□□□ -0.857e-10■■□□□ 11.6
GPC3-204ENST00000631057 SPG7Q9UQ90 795 aa9.72□□□□□ -0.85
GPC3-204ENST00000631057 AXIN2Q9Y2T1 843 aa9.72□□□□□ -0.85
GPC3-204ENST00000631057 MRC1P22897 1456 aa9.72□□□□□ -0.85
GPC3-204ENST00000631057 PARP4Q9UKK3 1724 aaKnown RBP9.72□□□□□ -0.85
GPC3-204ENST00000631057 ARFGEF2Q9Y6D5 1785 aa9.72□□□□□ -0.85
GPC3-204ENST00000631057 TATP17735 454 aaPredicted RBP9.71□□□□□ -0.85
GPC3-204ENST00000631057 NEXNQ0ZGT2 675 aa9.71□□□□□ -0.85
GPC3-204ENST00000631057 CWF19L2Q2TBE0 894 aaKnown RBP9.71□□□□□ -0.85
GPC3-204ENST00000631057 AACSQ86V21 672 aa9.71□□□□□ -0.85
GPC3-204ENST00000631057 SP7Q8TDD2 431 aaPredicted RBP9.71□□□□□ -0.85
GPC3-204ENST00000631057 SYAP1Q96A49 352 aaPredicted RBP9.71□□□□□ -0.85
GPC3-204ENST00000631057 SUCLG2Q96I99 432 aa9.71□□□□□ -0.85
GPC3-204ENST00000631057 TTC14Q96N46 770 aa9.71□□□□□ -0.85
GPC3-204ENST00000631057 SLC52A2Q9HAB3 445 aa9.71□□□□□ -0.85
GPC3-204ENST00000631057 NPHP3Q7Z494 1330 aa9.71□□□□□ -0.85
GPC3-204ENST00000631057 KDM6AO15550 1401 aaPredicted RBP9.71□□□□□ -0.85
GPC3-204ENST00000631057 DCCP43146 1447 aa9.71□□□□□ -0.85
GPC3-204ENST00000631057 FOXD4L5Q5VV16 416 aaPredicted RBP9.71□□□□□ -0.86
GPC3-204ENST00000631057 ZNF790Q6PG37 636 aa9.71□□□□□ -0.86
GPC3-204ENST00000631057 LRSAM1Q6UWE0 723 aa9.71□□□□□ -0.86
GPC3-204ENST00000631057 RIC3Q7Z5B4 369 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms