RNA–Protein interactions for RNA: ENST00000627622.1

CHD2-212, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-212ENST00000627622 COL3A1P02461 1466 aaPredicted RBP11.69□□□□□ -0.54
CHD2-212ENST00000627622 U2SURPO15042 1029 aaKnown RBP11.69□□□□□ -0.54
CHD2-212ENST00000627622 SCN4AP35499 1836 aa11.69□□□□□ -0.54
CHD2-212ENST00000627622 CNBD1Q8NA66 436 aa11.69□□□□□ -0.54
CHD2-212ENST00000627622 CNKSR1Q969H4 720 aa11.69□□□□□ -0.54
CHD2-212ENST00000627622 TAOK3Q9H2K8 898 aa11.69□□□□□ -0.54
CHD2-212ENST00000627622 NPHP1O15259 732 aa11.68□□□□□ -0.54
CHD2-212ENST00000627622 A1BGP04217 495 aa11.68□□□□□ -0.54
CHD2-212ENST00000627622 STYK1Q6J9G0 422 aa11.68□□□□□ -0.54
CHD2-212ENST00000627622 CAMTA2O94983 1202 aa11.67□□□□□ -0.54
CHD2-212ENST00000627622 SRGNP10124 158 aa11.67□□□□□ -0.54
CHD2-212ENST00000627622 ST5P78524 1137 aa11.67□□□□□ -0.54
CHD2-212ENST00000627622 SOGA3Q5TF21 947 aa11.67□□□□□ -0.54
CHD2-212ENST00000627622 CHADLQ6NUI6 762 aa11.67□□□□□ -0.54
CHD2-212ENST00000627622 PPP4R3CPQ6ZMV5 832 aa11.67□□□□□ -0.54
CHD2-212ENST00000627622 CCER1Q8TC90 406 aaPredicted RBP11.67□□□□□ -0.54
CHD2-212ENST00000627622 CEMIPQ8WUJ3 1361 aa11.67□□□□□ -0.54
CHD2-212ENST00000627622 BTBD11A6QL63 1104 aa11.66□□□□□ -0.54
CHD2-212ENST00000627622 DDNO94850 711 aaPredicted RBP11.66□□□□□ -0.54
CHD2-212ENST00000627622 PRPF40BQ6NWY9 871 aaKnown RBP11.66□□□□□ -0.54
CHD2-212ENST00000627622 MASTLQ96GX5 879 aa11.66□□□□□ -0.54
CHD2-212ENST00000627622 CREBZFQ9NS37 354 aa11.66□□□□□ -0.54
CHD2-212ENST00000627622 NPC1L1Q9UHC9 1359 aa11.66□□□□□ -0.54
CHD2-212ENST00000627622 DZIP3Q86Y13 1208 aaKnown RBP11.66□□□□□ -0.54
CHD2-212ENST00000627622 RNF216Q9NWF9 866 aaPredicted RBP11.66□□□□□ -0.54
CHD2-212ENST00000627622 KCNQ3O43525 872 aa11.65□□□□□ -0.54
CHD2-212ENST00000627622 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
CHD2-212ENST00000627622 POTEJP0CG39 1038 aa11.65□□□□□ -0.54
CHD2-212ENST00000627622 CLEC4GQ6UXB4 293 aa11.65□□□□□ -0.54
CHD2-212ENST00000627622 USP16Q9Y5T5 823 aa11.65□□□□□ -0.54
CHD2-212ENST00000627622 CNGB1Q14028 1251 aaPredicted RBP11.64□□□□□ -0.55
CHD2-212ENST00000627622 PHACTR3Q96KR7 559 aa11.64□□□□□ -0.55
CHD2-212ENST00000627622 IQCA1LA6NCM1 817 aa11.63□□□□□ -0.55
CHD2-212ENST00000627622 NBPF5PQ86XG9 351 aaPredicted RBP11.63□□□□□ -0.55
CHD2-212ENST00000627622 CNKSR2Q8WXI2 1034 aa11.63□□□□□ -0.55
CHD2-212ENST00000627622 MKRN1Q9UHC7 482 aaKnown RBP11.63□□□□□ -0.55
CHD2-212ENST00000627622 NPR1P16066 1061 aa11.63□□□□□ -0.55
CHD2-212ENST00000627622 PRKAR2BP31323 418 aa11.63□□□□□ -0.55
CHD2-212ENST00000627622 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
CHD2-212ENST00000627622 C7orf43Q8WVR3 580 aa11.63□□□□□ -0.55
CHD2-212ENST00000627622 L3MBTL3Q96JM7 780 aaPredicted RBP11.63□□□□□ -0.55
CHD2-212ENST00000627622 RSPH6AQ9H0K4 717 aa11.63□□□□□ -0.55
CHD2-212ENST00000627622 ZNF652Q9Y2D9 606 aa11.63□□□□□ -0.55
CHD2-212ENST00000627622 PRAMEF22A3QJZ6 481 aa11.62□□□□□ -0.55
CHD2-212ENST00000627622 KLRG2A4D1S0 409 aaPredicted RBP11.62□□□□□ -0.55
CHD2-212ENST00000627622 SNRPA1P09661 255 aaKnown RBP11.62□□□□□ -0.55
CHD2-212ENST00000627622 CCDC93Q567U6 631 aa11.62□□□□□ -0.55
CHD2-212ENST00000627622 CHRDL2Q6WN34 429 aa11.62□□□□□ -0.55
CHD2-212ENST00000627622 LDHDQ86WU2 507 aa11.62□□□□□ -0.55
CHD2-212ENST00000627622 TAF1DQ9H5J8 278 aaPredicted RBP11.62□□□□□ -0.55
CHD2-212ENST00000627622 PASKQ96RG2 1323 aa11.61□□□□□ -0.55
CHD2-212ENST00000627622 TPTE2Q6XPS3 522 aa11.61□□□□□ -0.55
CHD2-212ENST00000627622 CFAP53Q96M91 514 aa11.61□□□□□ -0.55
CHD2-212ENST00000627622 CNTNAP1P78357 1384 aa11.61□□□□□ -0.55
CHD2-212ENST00000627622 NUP98P52948 1817 aa11.61□□□□□ -0.55
CHD2-212ENST00000627622 RGL2O15211 777 aa11.6□□□□□ -0.55
CHD2-212ENST00000627622 FKBP4Q02790 459 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHD2-212ENST00000627622 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
CHD2-212ENST00000627622 ADAMTSL1Q8N6G6 1762 aa11.6□□□□□ -0.55
CHD2-212ENST00000627622 RTKN2Q8IZC4 609 aa11.6□□□□□ -0.55
CHD2-212ENST00000627622 NIP7Q9Y221 180 aaKnown RBP eCLIP11.6□□□□□ -0.55
CHD2-212ENST00000627622 NUDCQ9Y266 331 aa11.6□□□□□ -0.55
CHD2-212ENST00000627622 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
CHD2-212ENST00000627622 TMEM88BA6NKF7 163 aa11.59□□□□□ -0.55
CHD2-212ENST00000627622 FOXN1O15353 648 aa11.59□□□□□ -0.55
CHD2-212ENST00000627622 ITGBL1O95965 494 aaPredicted RBP11.59□□□□□ -0.55
CHD2-212ENST00000627622 ALDH1B1P30837 517 aa11.59□□□□□ -0.55
CHD2-212ENST00000627622 EAPPQ56P03 285 aaPredicted RBP11.59□□□□□ -0.55
CHD2-212ENST00000627622 MCM10Q7L590 875 aa11.59□□□□□ -0.55
CHD2-212ENST00000627622 ZNF277Q9NRM2 450 aaPredicted RBP11.59□□□□□ -0.55
CHD2-212ENST00000627622 HACL1Q9UJ83 578 aa11.59□□□□□ -0.55
CHD2-212ENST00000627622 DLG5Q8TDM6 1919 aa11.59□□□□□ -0.55
CHD2-212ENST00000627622 ZNF541Q9H0D2 1346 aa11.59□□□□□ -0.55
CHD2-212ENST00000627622 NBPF26B4DH59 902 aa11.58□□□□□ -0.56
CHD2-212ENST00000627622 NBPF10Q6P3W6 841 aaKnown RBP11.58□□□□□ -0.56
CHD2-212ENST00000627622 OLFM4Q6UX06 510 aa11.58□□□□□ -0.56
CHD2-212ENST00000627622 NBPF15Q8N660 670 aa11.58□□□□□ -0.56
CHD2-212ENST00000627622 CLEC11AQ9Y240 323 aa11.58□□□□□ -0.56
CHD2-212ENST00000627622 FAM177BA6PVY3 158 aa11.57□□□□□ -0.56
CHD2-212ENST00000627622 FZD9O00144 591 aa11.57□□□□□ -0.56
CHD2-212ENST00000627622 U2AF1L5P0DN76 240 aaPredicted RBP11.57□□□□□ -0.56
CHD2-212ENST00000627622 EPHX2P34913 555 aa11.57□□□□□ -0.56
CHD2-212ENST00000627622 VEGFBP49765 207 aa11.57□□□□□ -0.56
CHD2-212ENST00000627622 U2AF1Q01081 240 aaKnown RBP eCLIP11.57□□□□□ -0.56
CHD2-212ENST00000627622 PRDM10Q9NQV6 1147 aa11.57□□□□□ -0.56
CHD2-212ENST00000627622 HTATSF1O43719 755 aaKnown RBP11.57□□□□□ -0.56
CHD2-212ENST00000627622 GTF2E1P29083 439 aaPredicted RBP11.57□□□□□ -0.56
CHD2-212ENST00000627622 IARSP41252 1262 aaKnown RBP11.57□□□□□ -0.56
CHD2-212ENST00000627622 DCTN1Q14203 1278 aa11.57□□□□□ -0.56
CHD2-212ENST00000627622 HLFQ16534 295 aa11.57□□□□□ -0.56
CHD2-212ENST00000627622 PNMA8AQ86V59 439 aaPredicted RBP11.57□□□□□ -0.56
CHD2-212ENST00000627622 SYNE4Q8N205 404 aa11.57□□□□□ -0.56
CHD2-212ENST00000627622 CTCFP49711 727 aaPredicted RBP11.56□□□□□ -0.56
CHD2-212ENST00000627622 TAF7Q15545 349 aaPredicted RBP11.56□□□□□ -0.56
CHD2-212ENST00000627622 AIDAQ96BJ3 306 aa11.56□□□□□ -0.56
CHD2-212ENST00000627622 RNF123Q5XPI4 1314 aa11.56□□□□□ -0.56
CHD2-212ENST00000627622 KDM3BQ7LBC6 1761 aa11.55□□□□□ -0.56
CHD2-212ENST00000627622 CNTROBQ8N137 903 aa11.55□□□□□ -0.56
CHD2-212ENST00000627622 GPC2Q8N158 579 aa11.55□□□□□ -0.56
CHD2-212ENST00000627622 PSMD1Q99460 953 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 1130.7 ms