RNA–Protein interactions for RNA: ENST00000625837.2

DDX3X-215, Transcript of DEAD-box helicase 3 X-linked, humanhuman

TSL 5 BASIC

Gene DDX3X, Length 3,237 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX3X-215ENST00000625837 ST18O60284 1047 aa12.87□□□□□ -0.35
DDX3X-215ENST00000625837 DNAJC10Q8IXB1 793 aa12.87□□□□□ -0.35
DDX3X-215ENST00000625837 ZNF594Q96JF6 807 aaPredicted RBP12.87□□□□□ -0.35
DDX3X-215ENST00000625837 NEURL1BA8MQ27 555 aa12.86□□□□□ -0.35
DDX3X-215ENST00000625837 MCCP23508 829 aa12.86□□□□□ -0.35
DDX3X-215ENST00000625837 CHMLP26374 656 aa12.86□□□□□ -0.35
DDX3X-215ENST00000625837 GCKRQ14397 625 aa12.86□□□□□ -0.35
DDX3X-215ENST00000625837 IBTKQ9P2D0 1353 aaPredicted RBP12.86□□□□□ -0.35
DDX3X-215ENST00000625837 ZGPATQ8N5A5 531 aaKnown RBP12.86□□□□□ -0.35
DDX3X-215ENST00000625837 ESYT1Q9BSJ8 1104 aa12.86□□□□□ -0.35
DDX3X-215ENST00000625837 SSFA2P28290 1259 aa12.86□□□□□ -0.35
DDX3X-215ENST00000625837 KCNQ4P56696 695 aa12.86□□□□□ -0.35
DDX3X-215ENST00000625837 TAF7LQ5H9L4 462 aa12.86□□□□□ -0.35
DDX3X-215ENST00000625837 FSD1Q9BTV5 496 aa12.86□□□□□ -0.35
DDX3X-215ENST00000625837 HSP90AB4PQ58FF6 505 aa12.85□□□□□ -0.35
DDX3X-215ENST00000625837 CNTROBQ8N137 903 aa12.85□□□□□ -0.35
DDX3X-215ENST00000625837 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
DDX3X-215ENST00000625837 ALDH1L1O75891 902 aa12.85□□□□□ -0.35
DDX3X-215ENST00000625837 NBPF14Q5TI25 921 aa12.85□□□□□ -0.35
DDX3X-215ENST00000625837 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
DDX3X-215ENST00000625837 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
DDX3X-215ENST00000625837 EAF2Q96CJ1 260 aaPredicted RBP12.85□□□□□ -0.35
DDX3X-215ENST00000625837 TBC1D2BQ9UPU7 963 aa12.85□□□□□ -0.35
DDX3X-215ENST00000625837 RGPD1P0DJD0 1748 aa12.85□□□□□ -0.35
DDX3X-215ENST00000625837 KDM6AO15550 1401 aaPredicted RBP12.85□□□□□ -0.35
DDX3X-215ENST00000625837 SYNE4Q8N205 404 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 FAM89AQ96GI7 184 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 GPATCH3Q96I76 525 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 TCEANC2Q96MN5 208 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 METTL22Q9BUU2 404 aaPredicted RBP12.84□□□□□ -0.35
DDX3X-215ENST00000625837 PCDH11XQ9BZA7 1347 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 PCDH11YQ9BZA8 1340 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 RAB11FIP3O75154 756 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 RABEP1Q15276 862 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 ANTXR1Q9H6X2 564 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 EXOC5O00471 708 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 CHGBP05060 677 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 FAM182BQ5T319 152 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 KAZALD1Q96I82 304 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 LMTK3Q96Q04 1460 aa12.84□□□□□ -0.35
DDX3X-215ENST00000625837 PRIM1P49642 420 aaKnown RBP12.83□□□□□ -0.36
DDX3X-215ENST00000625837 TIMM10P62072 90 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 PKP1Q13835 747 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 GORABQ5T7V8 394 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 TNPO1Q92973 898 aaKnown RBP12.83□□□□□ -0.36
DDX3X-215ENST00000625837 MCM4P33991 863 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 TFCP2Q12800 502 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 ECHDC1Q9NTX5 307 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 NAP1L2Q9ULW6 460 aaPredicted RBP12.83□□□□□ -0.36
DDX3X-215ENST00000625837 SASH1O94885 1247 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 BRPF3Q9ULD4 1205 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 HDAC5Q9UQL6 1122 aa12.83□□□□□ -0.36
DDX3X-215ENST00000625837 RGPD5Q99666 1765 aa12.82□□□□□ -0.36
DDX3X-215ENST00000625837 MED1Q15648 1581 aaPredicted RBP12.82□□□□□ -0.36
DDX3X-215ENST00000625837 PRPF40BQ6NWY9 871 aaKnown RBP12.82□□□□□ -0.36
DDX3X-215ENST00000625837 PIGBQ92521 554 aa12.82□□□□□ -0.36
DDX3X-215ENST00000625837 FAM227BQ96M60 508 aa12.82□□□□□ -0.36
DDX3X-215ENST00000625837 GLRX3O76003 335 aaKnown RBP12.81□□□□□ -0.36
DDX3X-215ENST00000625837 POLA2Q14181 598 aa12.81□□□□□ -0.36
DDX3X-215ENST00000625837 SLFNL1Q499Z3 407 aa12.81□□□□□ -0.36
DDX3X-215ENST00000625837 MCTP1Q6DN14 999 aa12.81□□□□□ -0.36
DDX3X-215ENST00000625837 DDX46Q7L014 1031 aaKnown RBP12.81□□□□□ -0.36
DDX3X-215ENST00000625837 SMIM5Q71RC9 77 aa12.81□□□□□ -0.36
DDX3X-215ENST00000625837 CARD10Q9BWT7 1032 aa12.81□□□□□ -0.36
DDX3X-215ENST00000625837 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.81□□□□□ -0.365e-9■■■□□ 14.7
DDX3X-215ENST00000625837 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
DDX3X-215ENST00000625837 TRAK2O60296 914 aa12.81□□□□□ -0.36
DDX3X-215ENST00000625837 PPFIA3O75145 1194 aa12.81□□□□□ -0.36
DDX3X-215ENST00000625837 PI4K2BQ8TCG2 481 aa12.8□□□□□ -0.36
DDX3X-215ENST00000625837 DBNDD2Q9BQY9 259 aa12.8□□□□□ -0.36
DDX3X-215ENST00000625837 CWC25Q9NXE8 425 aaPredicted RBP12.8□□□□□ -0.36
DDX3X-215ENST00000625837 IL27Q8NEV9 243 aa12.79□□□□□ -0.36
DDX3X-215ENST00000625837 C8orf37Q96NL8 207 aa12.79□□□□□ -0.36
DDX3X-215ENST00000625837 ZNF142P52746 1687 aaPredicted RBP12.79□□□□□ -0.36
DDX3X-215ENST00000625837 FKBP4Q02790 459 aaKnown RBP eCLIP12.79□□□□□ -0.36
DDX3X-215ENST00000625837 ERC1Q8IUD2 1116 aa12.79□□□□□ -0.36
DDX3X-215ENST00000625837 KIF6Q6ZMV9 814 aa12.79□□□□□ -0.36
DDX3X-215ENST00000625837 BICDL1Q6ZP65 573 aa12.79□□□□□ -0.36
DDX3X-215ENST00000625837 PLBD2Q8NHP8 589 aa12.79□□□□□ -0.36
DDX3X-215ENST00000625837 PUS3Q9BZE2 481 aaKnown RBP12.79□□□□□ -0.36
DDX3X-215ENST00000625837 FGD1P98174 961 aa12.78□□□□□ -0.36
DDX3X-215ENST00000625837 GBP4Q96PP9 640 aa12.78□□□□□ -0.36
DDX3X-215ENST00000625837 OSBPL3Q9H4L5 887 aa12.78□□□□□ -0.36
DDX3X-215ENST00000625837 CASTP20810 708 aaKnown RBP12.78□□□□□ -0.36
DDX3X-215ENST00000625837 PTH1RQ03431 593 aa12.78□□□□□ -0.36
DDX3X-215ENST00000625837 LRRC24Q50LG9 513 aa12.78□□□□□ -0.36
DDX3X-215ENST00000625837 HSP90AB3PQ58FF7 597 aa12.78□□□□□ -0.36
DDX3X-215ENST00000625837 CCDC129Q6ZRS4 1044 aa12.78□□□□□ -0.36
DDX3X-215ENST00000625837 NGLY1Q96IV0 654 aa12.78□□□□□ -0.36
DDX3X-215ENST00000625837 JAKMIP1Q96N16 626 aaKnown RBP12.78□□□□□ -0.36
DDX3X-215ENST00000625837 STARD3NLO95772 234 aa12.77□□□□□ -0.36
DDX3X-215ENST00000625837 RASEFQ8IZ41 740 aa12.77□□□□□ -0.36
DDX3X-215ENST00000625837 HELBQ8NG08 1087 aaPredicted RBP12.77□□□□□ -0.36
DDX3X-215ENST00000625837 SNX21Q969T3 373 aa12.77□□□□□ -0.36
DDX3X-215ENST00000625837 TMX3Q96JJ7 454 aa12.77□□□□□ -0.36
DDX3X-215ENST00000625837 SEC62Q99442 399 aaKnown RBP12.77□□□□□ -0.36
DDX3X-215ENST00000625837 CAMTA1Q9Y6Y1 1673 aa12.77□□□□□ -0.36
DDX3X-215ENST00000625837 GOLGA6L22H0YM25 854 aa12.77□□□□□ -0.37
DDX3X-215ENST00000625837 STK3Q13188 491 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms