RNA–Protein interactions for RNA: ENST00000622702.1

PDLIM2-221, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5 BASIC

Gene PDLIM2, Length 1,490 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-221ENST00000622702 ARXQ96QS3 562 aa25.37■■□□□ 1.65
PDLIM2-221ENST00000622702 USP42Q9H9J4 1324 aaKnown RBP25.37■■□□□ 1.65
PDLIM2-221ENST00000622702 ZPR1O75312 459 aa25.36■■□□□ 1.65
PDLIM2-221ENST00000622702 MYL6BP14649 208 aa25.36■■□□□ 1.65
PDLIM2-221ENST00000622702 NPM2Q86SE8 214 aaKnown RBP25.35■■□□□ 1.65
PDLIM2-221ENST00000622702 NLGN1Q8N2Q7 840 aa25.35■■□□□ 1.65
PDLIM2-221ENST00000622702 KIF16BQ96L93 1317 aa25.34■■□□□ 1.65
PDLIM2-221ENST00000622702 A0A087WZG4 1122 aa25.34■■□□□ 1.65
PDLIM2-221ENST00000622702 NARFQ9UHQ1 456 aa25.34■■□□□ 1.65
PDLIM2-221ENST00000622702 USPL1Q5W0Q7 1092 aa25.34■■□□□ 1.65
PDLIM2-221ENST00000622702 G2E3Q7L622 706 aa25.34■■□□□ 1.65
PDLIM2-221ENST00000622702 PHAXQ9H814 394 aaKnown RBP25.34■■□□□ 1.65
PDLIM2-221ENST00000622702 FLIIQ13045 1269 aa25.33■■□□□ 1.65
PDLIM2-221ENST00000622702 TBC1D2BQ9UPU7 963 aa25.33■■□□□ 1.65
PDLIM2-221ENST00000622702 FKBP8Q14318 412 aa25.31■■□□□ 1.64
PDLIM2-221ENST00000622702 XAGE3Q8WTP9 111 aa25.31■■□□□ 1.64
PDLIM2-221ENST00000622702 PTPRCP08575 1304 aa25.3■■□□□ 1.64
PDLIM2-221ENST00000622702 MMP10P09238 476 aa25.3■■□□□ 1.64
PDLIM2-221ENST00000622702 COPS6Q7L5N1 327 aa25.3■■□□□ 1.64
PDLIM2-221ENST00000622702 ARHGAP45Q92619 1136 aa25.29■■□□□ 1.64
PDLIM2-221ENST00000622702 NOB1Q9ULX3 412 aaKnown RBP25.29■■□□□ 1.64
PDLIM2-221ENST00000622702 DZIP3Q86Y13 1208 aaKnown RBP25.28■■□□□ 1.64
PDLIM2-221ENST00000622702 FHDC1Q9C0D6 1143 aaPredicted RBP25.28■■□□□ 1.64
PDLIM2-221ENST00000622702 IPO8O15397 1037 aaKnown RBP25.28■■□□□ 1.64
PDLIM2-221ENST00000622702 AIMP1Q12904 312 aaKnown RBP25.28■■□□□ 1.64
PDLIM2-221ENST00000622702 TTLL7Q6ZT98 887 aa25.28■■□□□ 1.64
PDLIM2-221ENST00000622702 KLHL34Q8N239 644 aa25.28■■□□□ 1.64
PDLIM2-221ENST00000622702 BCL2L12Q9HB09 334 aa25.28■■□□□ 1.64
PDLIM2-221ENST00000622702 DDX58O95786 925 aaKnown RBP25.27■■□□□ 1.64
PDLIM2-221ENST00000622702 FKBP5Q13451 457 aaPredicted RBP25.27■■□□□ 1.64
PDLIM2-221ENST00000622702 RNF123Q5XPI4 1314 aa25.26■■□□□ 1.63
PDLIM2-221ENST00000622702 SCN7AQ01118 1682 aa25.26■■□□□ 1.63
PDLIM2-221ENST00000622702 FRAT1Q92837 279 aaPredicted RBP25.26■■□□□ 1.63
PDLIM2-221ENST00000622702 CAMTA2O94983 1202 aa25.25■■□□□ 1.63
PDLIM2-221ENST00000622702 ZKSCAN2Q63HK3 967 aa25.25■■□□□ 1.63
PDLIM2-221ENST00000622702 ANKRD13DQ6ZTN6 518 aa25.25■■□□□ 1.63
PDLIM2-221ENST00000622702 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.25■■□□□ 1.63
PDLIM2-221ENST00000622702 PLBD2Q8NHP8 589 aa25.25■■□□□ 1.63
PDLIM2-221ENST00000622702 KSR2Q6VAB6 950 aa25.24■■□□□ 1.63
PDLIM2-221ENST00000622702 ATF7IPQ6VMQ6 1270 aa25.24■■□□□ 1.63
PDLIM2-221ENST00000622702 KIF6Q6ZMV9 814 aa25.24■■□□□ 1.63
PDLIM2-221ENST00000622702 SYT17Q9BSW7 474 aa25.24■■□□□ 1.63
PDLIM2-221ENST00000622702 API5Q9BZZ5 524 aaKnown RBP25.24■■□□□ 1.63
PDLIM2-221ENST00000622702 PARP3Q9Y6F1 533 aa25.24■■□□□ 1.63
PDLIM2-221ENST00000622702 MAP3K15Q6ZN16 1313 aa25.24■■□□□ 1.63
PDLIM2-221ENST00000622702 BCORQ6W2J9 1755 aa25.23■■□□□ 1.63
PDLIM2-221ENST00000622702 ADCY9O60503 1353 aa25.23■■□□□ 1.63
PDLIM2-221ENST00000622702 TM4SF1P30408 202 aa25.23■■□□□ 1.63
PDLIM2-221ENST00000622702 RRP1P56182 461 aaKnown RBP25.23■■□□□ 1.63
PDLIM2-221ENST00000622702 PI4KAP2A4QPH2 592 aa25.22■■□□□ 1.63
PDLIM2-221ENST00000622702 ERVV-1B6SEH8 477 aa25.22■■□□□ 1.63
PDLIM2-221ENST00000622702 RGL2O15211 777 aa25.22■■□□□ 1.63
PDLIM2-221ENST00000622702 TRIM27P14373 513 aa25.22■■□□□ 1.63
PDLIM2-221ENST00000622702 DDR1Q08345 913 aa25.22■■□□□ 1.63
PDLIM2-221ENST00000622702 PI4KAP1Q8N8J0 262 aa25.22■■□□□ 1.63
PDLIM2-221ENST00000622702 SUPT16HQ9Y5B9 1047 aaKnown RBP25.22■■□□□ 1.63
PDLIM2-221ENST00000622702 NFIXQ14938 502 aa25.21■■□□□ 1.63
PDLIM2-221ENST00000622702 BICDL1Q6ZP65 573 aa25.21■■□□□ 1.63
PDLIM2-221ENST00000622702 RIC3Q7Z5B4 369 aa25.21■■□□□ 1.63
PDLIM2-221ENST00000622702 PLIN1O60240 522 aa25.2■■□□□ 1.62
PDLIM2-221ENST00000622702 TBC1D9BQ66K14 1250 aa25.2■■□□□ 1.62
PDLIM2-221ENST00000622702 DNAAF4Q8WXU2 420 aa25.2■■□□□ 1.62
PDLIM2-221ENST00000622702 ZBTB3Q9H5J0 574 aa25.2■■□□□ 1.62
PDLIM2-221ENST00000622702 MAP3K2Q9Y2U5 619 aa25.2■■□□□ 1.62
PDLIM2-221ENST00000622702 F6X3S4 739 aa25.19■■□□□ 1.62
PDLIM2-221ENST00000622702 POLRMTO00411 1230 aaKnown RBP25.19■■□□□ 1.62
PDLIM2-221ENST00000622702 ZNF652Q9Y2D9 606 aa25.19■■□□□ 1.62
PDLIM2-221ENST00000622702 CLEC4GQ6UXB4 293 aa25.18■■□□□ 1.62
PDLIM2-221ENST00000622702 GIGYF2Q6Y7W6 1299 aaKnown RBP25.18■■□□□ 1.62
PDLIM2-221ENST00000622702 CD2APQ9Y5K6 639 aa25.18■■□□□ 1.62
PDLIM2-221ENST00000622702 ABCC4O15439 1325 aa25.18■■□□□ 1.62
PDLIM2-221ENST00000622702 ARFGEF2Q9Y6D5 1785 aa25.17■■□□□ 1.62
PDLIM2-221ENST00000622702 MS4A1P11836 297 aa25.17■■□□□ 1.62
PDLIM2-221ENST00000622702 PXDNLA1KZ92 1463 aa25.17■■□□□ 1.62
PDLIM2-221ENST00000622702 PDE3AQ14432 1141 aa25.16■■□□□ 1.62
PDLIM2-221ENST00000622702 HLFQ16534 295 aa25.16■■□□□ 1.62
PDLIM2-221ENST00000622702 NLGN2Q8NFZ4 835 aa25.16■■□□□ 1.62
PDLIM2-221ENST00000622702 METTL22Q9BUU2 404 aaPredicted RBP25.16■■□□□ 1.62
PDLIM2-221ENST00000622702 TNNQ9UQP3 1299 aa25.16■■□□□ 1.62
PDLIM2-221ENST00000622702 DZIP1LQ8IYY4 767 aaKnown RBP25.15■■□□□ 1.62
PDLIM2-221ENST00000622702 SETDB2Q96T68 719 aa25.15■■□□□ 1.62
PDLIM2-221ENST00000622702 AFDNP55196 1824 aaKnown RBP25.15■■□□□ 1.62
PDLIM2-221ENST00000622702 SERPINB2P05120 415 aa25.15■■□□□ 1.62
PDLIM2-221ENST00000622702 HSP90AB3PQ58FF7 597 aa25.15■■□□□ 1.62
PDLIM2-221ENST00000622702 CLUAP1Q96AJ1 413 aa25.15■■□□□ 1.62
PDLIM2-221ENST00000622702 ATP10DQ9P241 1426 aa25.14■■□□□ 1.62
PDLIM2-221ENST00000622702 NUP98P52948 1817 aa25.14■■□□□ 1.62
PDLIM2-221ENST00000622702 TCIRG1Q13488 830 aa25.14■■□□□ 1.61
PDLIM2-221ENST00000622702 FTSJ3Q8IY81 847 aaKnown RBP25.14■■□□□ 1.61
PDLIM2-221ENST00000622702 RLBP1P12271 317 aa25.13■■□□□ 1.61
PDLIM2-221ENST00000622702 NEXNQ0ZGT2 675 aa25.13■■□□□ 1.61
PDLIM2-221ENST00000622702 SLC4A10Q6U841 1118 aa25.13■■□□□ 1.61
PDLIM2-221ENST00000622702 CARMIL3Q8ND23 1372 aa25.13■■□□□ 1.61
PDLIM2-221ENST00000622702 KIF13BQ9NQT8 1826 aa25.12■■□□□ 1.61
PDLIM2-221ENST00000622702 C10orf71Q711Q0 1435 aa25.12■■□□□ 1.61
PDLIM2-221ENST00000622702 BEND3Q5T5X7 828 aa25.12■■□□□ 1.61
PDLIM2-221ENST00000622702 INTS3Q68E01 1043 aaKnown RBP25.12■■□□□ 1.61
PDLIM2-221ENST00000622702 LINS1Q8NG48 757 aa25.12■■□□□ 1.61
PDLIM2-221ENST00000622702 NIP7Q9Y221 180 aaKnown RBP eCLIP25.12■■□□□ 1.61
PDLIM2-221ENST00000622702 NRXN2Q9P2S2 1712 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms