RNA–Protein interactions for RNA: ENST00000622680.1

LINC00963-214, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best)

Gene LINC00963, Length 781 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-214ENST00000622680 BRIP1Q9BX63 1249 aa14.72□□□□□ -0.05
LINC00963-214ENST00000622680 RSPH6AQ9H0K4 717 aa14.72□□□□□ -0.05
LINC00963-214ENST00000622680 BTBD11A6QL63 1104 aa14.71□□□□□ -0.05
LINC00963-214ENST00000622680 NPHP1O15259 732 aa14.71□□□□□ -0.05
LINC00963-214ENST00000622680 TEX13AQ9BXU3 409 aaPredicted RBP14.71□□□□□ -0.05
LINC00963-214ENST00000622680 TAF1P21675 1872 aa14.71□□□□□ -0.05
LINC00963-214ENST00000622680 ERFEQ4G0M1 354 aa14.7□□□□□ -0.06
LINC00963-214ENST00000622680 PRPF40BQ6NWY9 871 aaKnown RBP14.7□□□□□ -0.06
LINC00963-214ENST00000622680 DZIP3Q86Y13 1208 aaKnown RBP14.7□□□□□ -0.06
LINC00963-214ENST00000622680 SETDB2Q96T68 719 aa14.7□□□□□ -0.06
LINC00963-214ENST00000622680 USP16Q9Y5T5 823 aa14.7□□□□□ -0.06
LINC00963-214ENST00000622680 ST5P78524 1137 aa14.69□□□□□ -0.06
LINC00963-214ENST00000622680 MCM10Q7L590 875 aa14.69□□□□□ -0.06
LINC00963-214ENST00000622680 NPM2Q86SE8 214 aaKnown RBP14.69□□□□□ -0.06
LINC00963-214ENST00000622680 TAOK3Q9H2K8 898 aa14.69□□□□□ -0.06
LINC00963-214ENST00000622680 LTBP3Q9NS15 1303 aa14.68□□□□□ -0.06
LINC00963-214ENST00000622680 POTEIP0CG38 1075 aa14.68□□□□□ -0.06
LINC00963-214ENST00000622680 POTEJP0CG39 1038 aa14.68□□□□□ -0.06
LINC00963-214ENST00000622680 SRGNP10124 158 aa14.68□□□□□ -0.06
LINC00963-214ENST00000622680 PDZRN3Q9UPQ7 1066 aa14.68□□□□□ -0.06
LINC00963-214ENST00000622680 LTBP1Q14766 1721 aa14.67□□□□□ -0.06
LINC00963-214ENST00000622680 CAPN15O75808 1086 aa14.67□□□□□ -0.06
LINC00963-214ENST00000622680 DCTN1Q14203 1278 aa14.67□□□□□ -0.06
LINC00963-214ENST00000622680 DPY19L2Q6NUT2 758 aa14.67□□□□□ -0.06
LINC00963-214ENST00000622680 CFAP53Q96M91 514 aa14.67□□□□□ -0.06
LINC00963-214ENST00000622680 DDNO94850 711 aaPredicted RBP14.66□□□□□ -0.06
LINC00963-214ENST00000622680 HSPA1AP0DMV8 641 aaKnown RBP14.66□□□□□ -0.06
LINC00963-214ENST00000622680 HSPA1BP0DMV9 641 aaKnown RBP14.66□□□□□ -0.06
LINC00963-214ENST00000622680 STYK1Q6J9G0 422 aa14.66□□□□□ -0.06
LINC00963-214ENST00000622680 NBPF5PQ86XG9 351 aaPredicted RBP14.66□□□□□ -0.06
LINC00963-214ENST00000622680 CNKSR1Q969H4 720 aa14.66□□□□□ -0.06
LINC00963-214ENST00000622680 MASTLQ96GX5 879 aa14.66□□□□□ -0.06
LINC00963-214ENST00000622680 FAM177BA6PVY3 158 aa14.65□□□□□ -0.06
LINC00963-214ENST00000622680 U2AF1L5P0DN76 240 aaPredicted RBP14.65□□□□□ -0.06
LINC00963-214ENST00000622680 U2AF1Q01081 240 aaKnown RBP eCLIP14.65□□□□□ -0.06
LINC00963-214ENST00000622680 OLFM4Q6UX06 510 aa14.65□□□□□ -0.06
LINC00963-214ENST00000622680 COL4A5P29400 1685 aa14.65□□□□□ -0.06
LINC00963-214ENST00000622680 NBPF26B4DH59 902 aa14.64□□□□□ -0.07
LINC00963-214ENST00000622680 SNRPA1P09661 255 aaKnown RBP14.64□□□□□ -0.07
LINC00963-214ENST00000622680 PPP2R1AP30153 589 aa14.64□□□□□ -0.07
LINC00963-214ENST00000622680 NBPF10Q6P3W6 841 aaKnown RBP14.64□□□□□ -0.07
LINC00963-214ENST00000622680 TNS4Q8IZW8 715 aa14.64□□□□□ -0.07
LINC00963-214ENST00000622680 NBPF15Q8N660 670 aa14.64□□□□□ -0.07
LINC00963-214ENST00000622680 RTF1Q92541 710 aaKnown RBP14.64□□□□□ -0.07
LINC00963-214ENST00000622680 ABCC12Q96J65 1359 aa14.63□□□□□ -0.07
LINC00963-214ENST00000622680 CHADLQ6NUI6 762 aa14.63□□□□□ -0.07
LINC00963-214ENST00000622680 NIP7Q9Y221 180 aaKnown RBP eCLIP14.63□□□□□ -0.07
LINC00963-214ENST00000622680 NUDCQ9Y266 331 aa14.63□□□□□ -0.07
LINC00963-214ENST00000622680 ZNF652Q9Y2D9 606 aa14.63□□□□□ -0.07
LINC00963-214ENST00000622680 ZNF541Q9H0D2 1346 aa14.63□□□□□ -0.07
LINC00963-214ENST00000622680 CCDC93Q567U6 631 aa14.62□□□□□ -0.07
LINC00963-214ENST00000622680 SOGA3Q5TF21 947 aa14.62□□□□□ -0.07
LINC00963-214ENST00000622680 CLEC4GQ6UXB4 293 aa14.62□□□□□ -0.07
LINC00963-214ENST00000622680 C7orf43Q8WVR3 580 aa14.62□□□□□ -0.07
LINC00963-214ENST00000622680 MIS18AQ9NYP9 233 aa14.62□□□□□ -0.07
LINC00963-214ENST00000622680 MKRN1Q9UHC7 482 aaKnown RBP14.62□□□□□ -0.07
LINC00963-214ENST00000622680 POLR2AP24928 1970 aaKnown RBP14.62□□□□□ -0.07
LINC00963-214ENST00000622680 SNED1Q8TER0 1413 aa14.61□□□□□ -0.07
LINC00963-214ENST00000622680 NPR1P16066 1061 aa14.61□□□□□ -0.07
LINC00963-214ENST00000622680 HLFQ16534 295 aa14.61□□□□□ -0.07
LINC00963-214ENST00000622680 ZNF277Q9NRM2 450 aaPredicted RBP14.61□□□□□ -0.07
LINC00963-214ENST00000622680 DDX60Q8IY21 1712 aaKnown RBP14.6□□□□□ -0.07
LINC00963-214ENST00000622680 THSD7BQ9C0I4 1608 aa14.59□□□□□ -0.07
LINC00963-214ENST00000622680 FKBP4Q02790 459 aaKnown RBP eCLIP14.59□□□□□ -0.07
LINC00963-214ENST00000622680 L3MBTL3Q96JM7 780 aaPredicted RBP14.59□□□□□ -0.07
LINC00963-214ENST00000622680 CREBZFQ9NS37 354 aa14.59□□□□□ -0.07
LINC00963-214ENST00000622680 KLRG2A4D1S0 409 aaPredicted RBP14.58□□□□□ -0.08
LINC00963-214ENST00000622680 IQCA1LA6NCM1 817 aa14.58□□□□□ -0.08
LINC00963-214ENST00000622680 EAPPQ56P03 285 aaPredicted RBP14.58□□□□□ -0.08
LINC00963-214ENST00000622680 TPTE2Q6XPS3 522 aa14.58□□□□□ -0.08
LINC00963-214ENST00000622680 SLC51AQ86UW1 340 aa14.58□□□□□ -0.08
LINC00963-214ENST00000622680 NGEFQ8N5V2 710 aa14.58□□□□□ -0.08
LINC00963-214ENST00000622680 TAF1DQ9H5J8 278 aaPredicted RBP14.58□□□□□ -0.08
LINC00963-214ENST00000622680 PASKQ96RG2 1323 aa14.58□□□□□ -0.08
LINC00963-214ENST00000622680 CNTNAP1P78357 1384 aa14.58□□□□□ -0.08
LINC00963-214ENST00000622680 TAF7Q15545 349 aaPredicted RBP14.57□□□□□ -0.08
LINC00963-214ENST00000622680 LDHDQ86WU2 507 aa14.57□□□□□ -0.08
LINC00963-214ENST00000622680 NUTM1Q86Y26 1132 aa14.57□□□□□ -0.08
LINC00963-214ENST00000622680 RNF123Q5XPI4 1314 aa14.57□□□□□ -0.08
LINC00963-214ENST00000622680 LRRC37AA6NMS7 1700 aa14.56□□□□□ -0.08
LINC00963-214ENST00000622680 HTATSF1O43719 755 aaKnown RBP14.56□□□□□ -0.08
LINC00963-214ENST00000622680 THUMPD2Q9BTF0 503 aaKnown RBP14.56□□□□□ -0.08
LINC00963-214ENST00000622680 RIC1Q4ADV7 1423 aa14.56□□□□□ -0.08
LINC00963-214ENST00000622680 RGL2O15211 777 aa14.55□□□□□ -0.08
LINC00963-214ENST00000622680 GTF2E1P29083 439 aaPredicted RBP14.55□□□□□ -0.08
LINC00963-214ENST00000622680 IARSP41252 1262 aaKnown RBP14.55□□□□□ -0.08
LINC00963-214ENST00000622680 TTLL7Q6ZT98 887 aa14.55□□□□□ -0.08
LINC00963-214ENST00000622680 UBN2Q6ZU65 1347 aa14.55□□□□□ -0.08
LINC00963-214ENST00000622680 MYL6BP14649 208 aa14.54□□□□□ -0.08
LINC00963-214ENST00000622680 GPTP24298 496 aa14.54□□□□□ -0.08
LINC00963-214ENST00000622680 RTKN2Q8IZC4 609 aa14.54□□□□□ -0.08
LINC00963-214ENST00000622680 SYNE4Q8N205 404 aa14.54□□□□□ -0.08
LINC00963-214ENST00000622680 ZBTB3Q9H5J0 574 aa14.54□□□□□ -0.08
LINC00963-214ENST00000622680 HACL1Q9UJ83 578 aa14.54□□□□□ -0.08
LINC00963-214ENST00000622680 RRP7AQ9Y3A4 280 aaKnown RBP14.54□□□□□ -0.08
LINC00963-214ENST00000622680 MAP3K15Q6ZN16 1313 aa14.54□□□□□ -0.08
LINC00963-214ENST00000622680 CASP8AP2Q9UKL3 1982 aa14.54□□□□□ -0.08
LINC00963-214ENST00000622680 SPEF2Q9C093 1822 aa14.53□□□□□ -0.08
LINC00963-214ENST00000622680 IBTKQ9P2D0 1353 aaPredicted RBP14.53□□□□□ -0.08
LINC00963-214ENST00000622680 FOXN1O15353 648 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms