RNA–Protein interactions for RNA: ENST00000620505.1

TARDBP-222, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 657 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-222ENST00000620505 SIPA1L3O60292 1781 aaPredicted RBP11.71□□□□□ -0.54
TARDBP-222ENST00000620505 CEMIPQ8WUJ3 1361 aa11.7□□□□□ -0.54
TARDBP-222ENST00000620505 NFKBIEO00221 500 aa11.7□□□□□ -0.54
TARDBP-222ENST00000620505 C21orf2O43822 256 aa11.7□□□□□ -0.54
TARDBP-222ENST00000620505 LMNB1P20700 586 aa11.7□□□□□ -0.54
TARDBP-222ENST00000620505 PRR5LQ6MZQ0 368 aa11.7□□□□□ -0.54
TARDBP-222ENST00000620505 DNAJC5GQ8N7S2 189 aa11.7□□□□□ -0.54
TARDBP-222ENST00000620505 RTF1Q92541 710 aaKnown RBP11.7□□□□□ -0.54
TARDBP-222ENST00000620505 SCN7AQ01118 1682 aa11.69□□□□□ -0.54
TARDBP-222ENST00000620505 CAMTA2O94983 1202 aa11.69□□□□□ -0.54
TARDBP-222ENST00000620505 DZIP3Q86Y13 1208 aaKnown RBP11.69□□□□□ -0.54
TARDBP-222ENST00000620505 SETDB2Q96T68 719 aa11.69□□□□□ -0.54
TARDBP-222ENST00000620505 BRIP1Q9BX63 1249 aa11.69□□□□□ -0.54
TARDBP-222ENST00000620505 SBF1O95248 1867 aa11.69□□□□□ -0.54
TARDBP-222ENST00000620505 DLEC1Q9Y238 1755 aa11.69□□□□□ -0.54
TARDBP-222ENST00000620505 ANKRD31Q8N7Z5 1873 aa11.68□□□□□ -0.54
TARDBP-222ENST00000620505 FAM177BA6PVY3 158 aa11.68□□□□□ -0.54
TARDBP-222ENST00000620505 PDE6BP35913 854 aa11.68□□□□□ -0.54
TARDBP-222ENST00000620505 CNBD1Q8NA66 436 aa11.68□□□□□ -0.54
TARDBP-222ENST00000620505 MIS18AQ9NYP9 233 aa11.68□□□□□ -0.54
TARDBP-222ENST00000620505 WDR90Q96KV7 1748 aa11.67□□□□□ -0.54
TARDBP-222ENST00000620505 SNRPA1P09661 255 aaKnown RBP11.67□□□□□ -0.54
TARDBP-222ENST00000620505 FSTL1Q12841 308 aa11.67□□□□□ -0.54
TARDBP-222ENST00000620505 LHX8Q68G74 356 aa11.67□□□□□ -0.54
TARDBP-222ENST00000620505 COL11A2P13942 1736 aaPredicted RBP11.66□□□□□ -0.54
TARDBP-222ENST00000620505 TNRC6CQ9HCJ0 1690 aaKnown RBP11.66□□□□□ -0.54
TARDBP-222ENST00000620505 GLTPD2A6NH11 291 aa11.66□□□□□ -0.54
TARDBP-222ENST00000620505 ST5P78524 1137 aa11.66□□□□□ -0.54
TARDBP-222ENST00000620505 SMC1BQ8NDV3 1235 aa11.66□□□□□ -0.54
TARDBP-222ENST00000620505 TIAM2Q8IVF5 1701 aa11.66□□□□□ -0.54
TARDBP-222ENST00000620505 NBPF26B4DH59 902 aa11.65□□□□□ -0.54
TARDBP-222ENST00000620505 PRKAR2AP13861 404 aaKnown RBP11.65□□□□□ -0.54
TARDBP-222ENST00000620505 VEGFAP15692 232 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-222ENST00000620505 ERFEQ4G0M1 354 aa11.65□□□□□ -0.54
TARDBP-222ENST00000620505 NBPF10Q6P3W6 841 aaKnown RBP11.65□□□□□ -0.54
TARDBP-222ENST00000620505 NBPF5PQ86XG9 351 aaPredicted RBP11.65□□□□□ -0.54
TARDBP-222ENST00000620505 NGEFQ8N5V2 710 aa11.65□□□□□ -0.54
TARDBP-222ENST00000620505 NBPF15Q8N660 670 aa11.65□□□□□ -0.54
TARDBP-222ENST00000620505 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
TARDBP-222ENST00000620505 ZC3H4Q9UPT8 1303 aaKnown RBP11.64□□□□□ -0.55
TARDBP-222ENST00000620505 CCDC88AQ3V6T2 1871 aa11.64□□□□□ -0.55
TARDBP-222ENST00000620505 CEP350Q5VT06 3117 aa11.64□□□□□ -0.55
TARDBP-222ENST00000620505 PRPF40BQ6NWY9 871 aaKnown RBP11.64□□□□□ -0.55
TARDBP-222ENST00000620505 KLRG1Q96E93 195 aa11.64□□□□□ -0.55
TARDBP-222ENST00000620505 THUMPD2Q9BTF0 503 aaKnown RBP11.64□□□□□ -0.55
TARDBP-222ENST00000620505 PDZRN3Q9UPQ7 1066 aa11.64□□□□□ -0.55
TARDBP-222ENST00000620505 BCORQ6W2J9 1755 aa11.64□□□□□ -0.55
TARDBP-222ENST00000620505 C19orf67A6NJJ6 358 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 POTECB2RU33 542 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 SRGNP10124 158 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 TAF7Q15545 349 aaPredicted RBP11.63□□□□□ -0.55
TARDBP-222ENST00000620505 HLFQ16534 295 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 STYK1Q6J9G0 422 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 DPY19L2Q6NUT2 758 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 CNKSR1Q969H4 720 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 MASTLQ96GX5 879 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 TAOK3Q9H2K8 898 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 NIP7Q9Y221 180 aaKnown RBP eCLIP11.63□□□□□ -0.55
TARDBP-222ENST00000620505 ZNF652Q9Y2D9 606 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 CACNA1SQ13698 1873 aa11.63□□□□□ -0.55
TARDBP-222ENST00000620505 HTATSF1O43719 755 aaKnown RBP11.62□□□□□ -0.55
TARDBP-222ENST00000620505 DDNO94850 711 aaPredicted RBP11.62□□□□□ -0.55
TARDBP-222ENST00000620505 OLFM4Q6UX06 510 aa11.62□□□□□ -0.55
TARDBP-222ENST00000620505 RRP7AQ9Y3A4 280 aaKnown RBP11.62□□□□□ -0.55
TARDBP-222ENST00000620505 SLX4Q8IY92 1834 aa11.62□□□□□ -0.55
TARDBP-222ENST00000620505 GABBR2O75899 941 aa11.61□□□□□ -0.55
TARDBP-222ENST00000620505 NEFMP07197 916 aa11.61□□□□□ -0.55
TARDBP-222ENST00000620505 GTF2E1P29083 439 aaPredicted RBP11.61□□□□□ -0.55
TARDBP-222ENST00000620505 FER1L6Q2WGJ9 1857 aa11.6□□□□□ -0.55
TARDBP-222ENST00000620505 POTEIP0CG38 1075 aa11.6□□□□□ -0.55
TARDBP-222ENST00000620505 POTEJP0CG39 1038 aa11.6□□□□□ -0.55
TARDBP-222ENST00000620505 NPR1P16066 1061 aa11.6□□□□□ -0.55
TARDBP-222ENST00000620505 CLEC4GQ6UXB4 293 aa11.6□□□□□ -0.55
TARDBP-222ENST00000620505 TPTE2Q6XPS3 522 aa11.6□□□□□ -0.55
TARDBP-222ENST00000620505 MYL6BP14649 208 aa11.59□□□□□ -0.55
TARDBP-222ENST00000620505 GPTP24298 496 aa11.59□□□□□ -0.55
TARDBP-222ENST00000620505 CCDC93Q567U6 631 aa11.59□□□□□ -0.55
TARDBP-222ENST00000620505 TTLL7Q6ZT98 887 aa11.59□□□□□ -0.55
TARDBP-222ENST00000620505 NUTM1Q86Y26 1132 aa11.59□□□□□ -0.55
TARDBP-222ENST00000620505 PLEKHF1Q96S99 279 aa11.59□□□□□ -0.55
TARDBP-222ENST00000620505 LTBP3Q9NS15 1303 aa11.59□□□□□ -0.55
TARDBP-222ENST00000620505 EIF4A1P60842 406 aaKnown RBP11.58□□□□□ -0.56
TARDBP-222ENST00000620505 NFE2L2Q16236 605 aa11.58□□□□□ -0.56
TARDBP-222ENST00000620505 SOGA3Q5TF21 947 aa11.58□□□□□ -0.56
TARDBP-222ENST00000620505 JMYQ8N9B5 988 aa11.58□□□□□ -0.56
TARDBP-222ENST00000620505 C7orf43Q8WVR3 580 aa11.58□□□□□ -0.56
TARDBP-222ENST00000620505 ZBTB3Q9H5J0 574 aa11.58□□□□□ -0.56
TARDBP-222ENST00000620505 ZNF277Q9NRM2 450 aaPredicted RBP11.58□□□□□ -0.56
TARDBP-222ENST00000620505 MAPK8IP3Q9UPT6 1336 aa11.58□□□□□ -0.56
TARDBP-222ENST00000620505 ABCC12Q96J65 1359 aa11.57□□□□□ -0.56
TARDBP-222ENST00000620505 DLG5Q8TDM6 1919 aa11.57□□□□□ -0.56
TARDBP-222ENST00000620505 SPDYE2BA6NHP3 402 aa11.57□□□□□ -0.56
TARDBP-222ENST00000620505 SPDYE6P0CI01 402 aa11.57□□□□□ -0.56
TARDBP-222ENST00000620505 SPDYE2Q495Y8 402 aa11.57□□□□□ -0.56
TARDBP-222ENST00000620505 COL13A1Q5TAT6 717 aaPredicted RBP11.57□□□□□ -0.56
TARDBP-222ENST00000620505 PNISRQ8TF01 805 aaKnown RBP11.57□□□□□ -0.56
TARDBP-222ENST00000620505 ZNF541Q9H0D2 1346 aa11.57□□□□□ -0.56
TARDBP-222ENST00000620505 LAMB4A4D0S4 1761 aa11.56□□□□□ -0.56
TARDBP-222ENST00000620505 ARFGEF2Q9Y6D5 1785 aa11.56□□□□□ -0.56
TARDBP-222ENST00000620505 KLRG2A4D1S0 409 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms