RNA–Protein interactions for RNA: ENST00000618939.4

CNOT3-210, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 5

Gene CNOT3, Length 4,516 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-210ENST00000618939 CLASP1Q7Z460 1538 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 TTC41PQ6P2S7 1318 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 MADDQ8WXG6 1647 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 RRP9O43818 475 aaKnown RBP16.36■□□□□ 0.21
CNOT3-210ENST00000618939 IDH1O75874 414 aaKnown RBP16.36■□□□□ 0.21
CNOT3-210ENST00000618939 XAGE3Q8WTP9 111 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 INTS4Q96HW7 963 aaKnown RBP16.36■□□□□ 0.21
CNOT3-210ENST00000618939 MPHOSPH8Q99549 860 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 HMG20BQ9P0W2 317 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 SLC39A6Q13433 755 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 NECAB1Q8N987 351 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 MNS1Q8NEH6 495 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 SIRT1Q96EB6 747 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 NACAP1Q9BZK3 213 aa16.36■□□□□ 0.21
CNOT3-210ENST00000618939 METTL24Q5JXM2 366 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 COPS6Q7L5N1 327 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 PRIM1P49642 420 aaKnown RBP16.35■□□□□ 0.21
CNOT3-210ENST00000618939 TRIM22Q8IYM9 498 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 CDKL5O76039 1030 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 USP48Q86UV5 1035 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 CKAP2LQ8IYA6 745 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 PDILTQ8N807 584 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 GSPT1P15170 499 aaKnown RBP16.35■□□□□ 0.21
CNOT3-210ENST00000618939 FILIP1Q7Z7B0 1213 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 IP6K1Q92551 441 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 TCEANC2Q96MN5 208 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 ZBTB3Q9H5J0 574 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 BABAM1Q9NWV8 329 aa16.35■□□□□ 0.21
CNOT3-210ENST00000618939 STARD3NLO95772 234 aa16.34■□□□□ 0.21
CNOT3-210ENST00000618939 HCLS1P14317 486 aaPredicted RBP16.34■□□□□ 0.21
CNOT3-210ENST00000618939 CWF19L2Q2TBE0 894 aaKnown RBP16.34■□□□□ 0.21
CNOT3-210ENST00000618939 CCDC47Q96A33 483 aaKnown RBP16.34■□□□□ 0.21
CNOT3-210ENST00000618939 NEK1Q96PY6 1258 aa16.34■□□□□ 0.21
CNOT3-210ENST00000618939 CNPY2Q9Y2B0 182 aa16.34■□□□□ 0.21
CNOT3-210ENST00000618939 GOLIM4O00461 696 aa16.34■□□□□ 0.21
CNOT3-210ENST00000618939 MCM5P33992 734 aa16.34■□□□□ 0.21
CNOT3-210ENST00000618939 BRPF1P55201 1214 aaPredicted RBP16.34■□□□□ 0.21
CNOT3-210ENST00000618939 DDX19AQ9NUU7 478 aaKnown RBP16.34■□□□□ 0.21
CNOT3-210ENST00000618939 PNMA6EA0A0J9YXQ4 647 aa16.33■□□□□ 0.21
CNOT3-210ENST00000618939 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.21
CNOT3-210ENST00000618939 TMEM2Q9UHN6 1383 aa16.33■□□□□ 0.21
CNOT3-210ENST00000618939 IPO7O95373 1038 aaKnown RBP16.33■□□□□ 0.2
CNOT3-210ENST00000618939 AATKQ6ZMQ8 1374 aa16.33■□□□□ 0.2
CNOT3-210ENST00000618939 CCDC69A6NI79 296 aa16.33■□□□□ 0.2
CNOT3-210ENST00000618939 AK2P54819 239 aa16.33■□□□□ 0.2
CNOT3-210ENST00000618939 FAM135BQ49AJ0 1406 aa16.33■□□□□ 0.2
CNOT3-210ENST00000618939 CHRNA2Q15822 529 aa16.33■□□□□ 0.2
CNOT3-210ENST00000618939 GOLGA6L1Q8N7Z2 621 aa16.33■□□□□ 0.2
CNOT3-210ENST00000618939 TMOD3Q9NYL9 352 aa16.33■□□□□ 0.2
CNOT3-210ENST00000618939 RTL1A6NKG5 1358 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 ADCY5O95622 1261 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 GUCY1B3Q02153 619 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 UVSSAQ2YD98 709 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 PHF23Q9BUL5 403 aaPredicted RBP16.32■□□□□ 0.2
CNOT3-210ENST00000618939 USP19O94966 1318 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 ZNF771Q7L3S4 317 aaPredicted RBP16.32■□□□□ 0.2
CNOT3-210ENST00000618939 STK11IPQ8N1F8 1099 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 CCDC112Q8NEF3 446 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 ABCC3O15438 1527 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 SERPINC1P01008 464 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 GCP02774 474 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 IFIT5Q13325 482 aaKnown RBP16.32■□□□□ 0.2
CNOT3-210ENST00000618939 DDX46Q7L014 1031 aaKnown RBP16.32■□□□□ 0.2
CNOT3-210ENST00000618939 CWC25Q9NXE8 425 aaPredicted RBP16.32■□□□□ 0.2
CNOT3-210ENST00000618939 ATP7BP35670 1465 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 HECW2Q9P2P5 1572 aa16.32■□□□□ 0.2
CNOT3-210ENST00000618939 CCT2P78371 535 aaKnown RBP16.31■□□□□ 0.2
CNOT3-210ENST00000618939 GIMAP6Q6P9H5 292 aa16.31■□□□□ 0.2
CNOT3-210ENST00000618939 ARHGEF10O15013 1369 aa16.31■□□□□ 0.2
CNOT3-210ENST00000618939 F13A1P00488 732 aa16.31■□□□□ 0.2
CNOT3-210ENST00000618939 PCMTD1Q96MG8 357 aaPredicted RBP16.31■□□□□ 0.2
CNOT3-210ENST00000618939 GNL3LQ9NVN8 582 aaKnown RBP16.31■□□□□ 0.2
CNOT3-210ENST00000618939 METP08581 1390 aa16.31■□□□□ 0.2
CNOT3-210ENST00000618939 ARGLU1Q9NWB6 273 aaPredicted RBP16.31■□□□□ 0.2
CNOT3-210ENST00000618939 AIDAQ96BJ3 306 aa16.31■□□□□ 0.2
CNOT3-210ENST00000618939 POLR1AO95602 1720 aaPredicted RBP16.3■□□□□ 0.2
CNOT3-210ENST00000618939 TDO2P48775 406 aa16.3■□□□□ 0.2
CNOT3-210ENST00000618939 NMIQ13287 307 aaPredicted RBP16.3■□□□□ 0.2
CNOT3-210ENST00000618939 C8orf76Q96K31 380 aa16.3■□□□□ 0.2
CNOT3-210ENST00000618939 LAMC1P11047 1609 aa16.3■□□□□ 0.2
CNOT3-210ENST00000618939 RNF17Q9BXT8 1623 aaKnown RBP16.3■□□□□ 0.2
CNOT3-210ENST00000618939 HOXB7P09629 217 aa16.3■□□□□ 0.2
CNOT3-210ENST00000618939 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
CNOT3-210ENST00000618939 RNMTO43148 476 aaKnown RBP16.29■□□□□ 0.2
CNOT3-210ENST00000618939 DHX8Q14562 1220 aaKnown RBP16.29■□□□□ 0.2
CNOT3-210ENST00000618939 BRF1Q92994 677 aa16.29■□□□□ 0.2
CNOT3-210ENST00000618939 ANO10Q9NW15 660 aa16.29■□□□□ 0.2
CNOT3-210ENST00000618939 DNM1Q05193 864 aaKnown RBP16.29■□□□□ 0.2
CNOT3-210ENST00000618939 SNRKQ9NRH2 765 aa16.29■□□□□ 0.2
CNOT3-210ENST00000618939 E9PCH4 1651 aa16.29■□□□□ 0.2
CNOT3-210ENST00000618939 CCP110O43303 1012 aa16.28■□□□□ 0.2
CNOT3-210ENST00000618939 AOX1Q06278 1338 aa16.28■□□□□ 0.2
CNOT3-210ENST00000618939 ZNF853P0CG23 659 aa16.28■□□□□ 0.2
CNOT3-210ENST00000618939 LTKP29376 864 aa16.28■□□□□ 0.2
CNOT3-210ENST00000618939 GPS2Q13227 327 aa16.28■□□□□ 0.2
CNOT3-210ENST00000618939 VPS53Q5VIR6 699 aa16.28■□□□□ 0.2
CNOT3-210ENST00000618939 CTAGE5O15320 804 aa16.28■□□□□ 0.2
CNOT3-210ENST00000618939 LMBR1LQ6UX01 489 aa16.28■□□□□ 0.2
CNOT3-210ENST00000618939 LGR6Q9HBX8 967 aa16.28■□□□□ 0.2
CNOT3-210ENST00000618939 MTMR7Q9Y216 660 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms