RNA–Protein interactions for RNA: ENST00000614496.4

MSH6-213, Transcript of mutS homolog 6, humanhuman

TSL 1 (best) BASIC

Gene MSH6, Length 4,150 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-213ENST00000614496 ZNF771Q7L3S4 317 aaPredicted RBP14.86□□□□□ -0.03
MSH6-213ENST00000614496 RASEFQ8IZ41 740 aa14.86□□□□□ -0.03
MSH6-213ENST00000614496 CPLX1O14810 134 aa14.86□□□□□ -0.03
MSH6-213ENST00000614496 ME1P48163 572 aa14.86□□□□□ -0.03
MSH6-213ENST00000614496 PIP4K2AP48426 406 aaPredicted RBP14.86□□□□□ -0.03
MSH6-213ENST00000614496 WASHC4Q2M389 1173 aa14.86□□□□□ -0.03
MSH6-213ENST00000614496 TNRQ92752 1358 aa14.86□□□□□ -0.03
MSH6-213ENST00000614496 AATKQ6ZMQ8 1374 aa14.86□□□□□ -0.03
MSH6-213ENST00000614496 SPDYE4A6NLX3 237 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 TPM4P67936 248 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 THEMISQ8N1K5 641 aaPredicted RBP14.85□□□□□ -0.03
MSH6-213ENST00000614496 MYD88Q99836 296 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 TOMM22Q9NS69 142 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 DACT1Q9NYF0 836 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 AK9Q5TCS8 1911 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 HOXC9P31274 260 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 NMIQ13287 307 aaPredicted RBP14.85□□□□□ -0.03
MSH6-213ENST00000614496 OSBPL3Q9H4L5 887 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 HECW2Q9P2P5 1572 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 MED14O60244 1454 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 KCNQ3O43525 872 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 PDCL2Q8N4E4 241 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 TTC21AQ8NDW8 1320 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 NCOA3Q9Y6Q9 1424 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 PHF8Q9UPP1 1060 aa14.85□□□□□ -0.03
MSH6-213ENST00000614496 RAD50Q92878 1312 aa14.84□□□□□ -0.03
MSH6-213ENST00000614496 KLHDC4Q8TBB5 520 aa14.84□□□□□ -0.03
MSH6-213ENST00000614496 FAM227BQ96M60 508 aa14.84□□□□□ -0.03
MSH6-213ENST00000614496 ATP7BP35670 1465 aa14.84□□□□□ -0.03
MSH6-213ENST00000614496 APPP05067 770 aa14.84□□□□□ -0.03
MSH6-213ENST00000614496 CCT2P78371 535 aaKnown RBP14.84□□□□□ -0.03
MSH6-213ENST00000614496 SCAND2PQ9GZW5 306 aaPredicted RBP14.84□□□□□ -0.03
MSH6-213ENST00000614496 ZHX1Q9UKY1 873 aaPredicted RBP14.84□□□□□ -0.03
MSH6-213ENST00000614496 MAP3K5Q99683 1374 aa14.84□□□□□ -0.03
MSH6-213ENST00000614496 IBTKQ9P2D0 1353 aaPredicted RBP14.83□□□□□ -0.03
MSH6-213ENST00000614496 ZNF500O60304 480 aaPredicted RBP14.83□□□□□ -0.03
MSH6-213ENST00000614496 SLC39A6Q13433 755 aa14.83□□□□□ -0.03
MSH6-213ENST00000614496 CCDC186Q7Z3E2 898 aa14.83□□□□□ -0.03
MSH6-213ENST00000614496 LUZP1Q86V48 1076 aa14.83□□□□□ -0.03
MSH6-213ENST00000614496 HOMER1Q86YM7 354 aa14.83□□□□□ -0.03
MSH6-213ENST00000614496 PTH1RQ03431 593 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 PPP4R3BQ5MIZ7 849 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 CAMSAP1Q5T5Y3 1602 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 KIDINS220Q9ULH0 1771 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 SHPRHQ149N8 1683 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 CYP2E1P05181 493 aaPredicted RBP14.83□□□□□ -0.04
MSH6-213ENST00000614496 ZNF165P49910 485 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 ANO6Q4KMQ2 910 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 CREB3L3Q68CJ9 461 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 RUFY3Q7L099 469 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 PTPRMP28827 1452 aa14.83□□□□□ -0.04
MSH6-213ENST00000614496 SMC2O95347 1197 aa14.82□□□□□ -0.04
MSH6-213ENST00000614496 CUL4AQ13619 759 aa14.82□□□□□ -0.04
MSH6-213ENST00000614496 CCDC112Q8NEF3 446 aa14.82□□□□□ -0.04
MSH6-213ENST00000614496 CCDC85AQ96PX6 553 aaPredicted RBP14.82□□□□□ -0.04
MSH6-213ENST00000614496 CDK12Q9NYV4 1490 aaPredicted RBP14.82□□□□□ -0.04
MSH6-213ENST00000614496 PTGS1P23219 599 aa14.82□□□□□ -0.04
MSH6-213ENST00000614496 LMTK2Q8IWU2 1503 aa14.82□□□□□ -0.04
MSH6-213ENST00000614496 ATP5J2-PTCD1G3V325 749 aa14.82□□□□□ -0.04
MSH6-213ENST00000614496 PTCD1O75127 700 aaKnown RBP14.82□□□□□ -0.04
MSH6-213ENST00000614496 CLEC17AQ6ZS10 378 aa14.82□□□□□ -0.04
MSH6-213ENST00000614496 SSH3Q8TE77 659 aa14.82□□□□□ -0.04
MSH6-213ENST00000614496 NDUFB9Q9Y6M9 179 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 LTKP29376 864 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 CLIP2Q9UDT6 1046 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 ABCA9Q8IUA7 1624 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 VWDEQ8N2E2 1590 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 PLEKHG3A1L390 1219 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 ADCK5Q3MIX3 580 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 SYNE3Q6ZMZ3 975 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 TRMT1Q9NXH9 659 aaKnown RBP14.81□□□□□ -0.04
MSH6-213ENST00000614496 STK38Q15208 465 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 DDX46Q7L014 1031 aaKnown RBP14.81□□□□□ -0.04
MSH6-213ENST00000614496 STK11IPQ8N1F8 1099 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 DNAJC25Q9H1X3 360 aa14.81□□□□□ -0.04
MSH6-213ENST00000614496 SBNO1A3KN83 1393 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 NEXMIFQ5QGS0 1516 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 TYRO3Q06418 890 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 TNNT1P13805 278 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 FKBP4Q02790 459 aaKnown RBP eCLIP14.8□□□□□ -0.04
MSH6-213ENST00000614496 BRF1Q92994 677 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 CFAP45Q9UL16 551 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 NEO1Q92859 1461 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 CFAP74Q9C0B2 1584 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 COL3A1P02461 1466 aaPredicted RBP14.8□□□□□ -0.04
MSH6-213ENST00000614496 VPS53Q5VIR6 699 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 CCDC171Q6TFL3 1326 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 UBE3BQ7Z3V4 1068 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 CREBRFQ8IUR6 639 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 FAM200AQ8TCP9 573 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 PRIMPOLQ96LW4 560 aa14.8□□□□□ -0.04
MSH6-213ENST00000614496 ROBO2Q9HCK4 1378 aa14.79□□□□□ -0.04
MSH6-213ENST00000614496 GRM8O00222 908 aa14.79□□□□□ -0.04
MSH6-213ENST00000614496 LARP1Q6PKG0 1096 aaKnown RBP14.79□□□□□ -0.04
MSH6-213ENST00000614496 EDC3Q96F86 508 aaKnown RBP14.79□□□□□ -0.04
MSH6-213ENST00000614496 STAP2Q9UGK3 403 aa14.79□□□□□ -0.04
MSH6-213ENST00000614496 LARGE1O95461 756 aa14.79□□□□□ -0.04
MSH6-213ENST00000614496 KSR2Q6VAB6 950 aa14.79□□□□□ -0.04
MSH6-213ENST00000614496 RALYLQ86SE5 291 aaKnown RBP14.79□□□□□ -0.04
MSH6-213ENST00000614496 RAB11FIP4Q86YS3 637 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms