RNA–Protein interactions for RNA: ENST00000612311.4

TMCO1-208, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 1 (best) BASIC

Gene TMCO1, Length 4,468 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-208ENST00000612311 GJB2P29033 226 aa10.09□□□□□ -0.79
TMCO1-208ENST00000612311 MAP3K12Q12852 859 aa10.09□□□□□ -0.79
TMCO1-208ENST00000612311 IP6K1Q92551 441 aa10.09□□□□□ -0.79
TMCO1-208ENST00000612311 WASF1Q92558 559 aa10.09□□□□□ -0.79
TMCO1-208ENST00000612311 NOL7Q9UMY1 257 aaKnown RBP10.09□□□□□ -0.79
TMCO1-208ENST00000612311 SAMD9LQ8IVG5 1584 aa10.09□□□□□ -0.79
TMCO1-208ENST00000612311 IKQ13123 557 aaPredicted RBP10.09□□□□□ -0.79
TMCO1-208ENST00000612311 C8orf76Q96K31 380 aa10.09□□□□□ -0.79
TMCO1-208ENST00000612311 HMG20BQ9P0W2 317 aa10.09□□□□□ -0.79
TMCO1-208ENST00000612311 GUCY1B3Q02153 619 aa10.08□□□□□ -0.8
TMCO1-208ENST00000612311 NEK1Q96PY6 1258 aa10.08□□□□□ -0.8
TMCO1-208ENST00000612311 TFIP11Q9UBB9 837 aaKnown RBP10.08□□□□□ -0.8
TMCO1-208ENST00000612311 SOS1Q07889 1333 aaPredicted RBP10.08□□□□□ -0.8
TMCO1-208ENST00000612311 PIP4K2AP48426 406 aaPredicted RBP10.08□□□□□ -0.8
TMCO1-208ENST00000612311 BRPF1P55201 1214 aaPredicted RBP10.08□□□□□ -0.8
TMCO1-208ENST00000612311 DHX8Q14562 1220 aaKnown RBP10.08□□□□□ -0.8
TMCO1-208ENST00000612311 DDX46Q7L014 1031 aaKnown RBP10.08□□□□□ -0.8
TMCO1-208ENST00000612311 PHAXQ9H814 394 aaKnown RBP10.08□□□□□ -0.8
TMCO1-208ENST00000612311 DACH1Q9UI36 760 aa10.08□□□□□ -0.8
TMCO1-208ENST00000612311 PA2G4Q9UQ80 394 aaKnown RBP10.08□□□□□ -0.8
TMCO1-208ENST00000612311 NEO1Q92859 1461 aa10.08□□□□□ -0.8
TMCO1-208ENST00000612311 ADAMTS2O95450 1211 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 KDM5CP41229 1560 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 CCT2P78371 535 aaKnown RBP10.07□□□□□ -0.8
TMCO1-208ENST00000612311 LMBR1LQ6UX01 489 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 ZCRB1Q8TBF4 217 aaKnown RBP10.07□□□□□ -0.8
TMCO1-208ENST00000612311 MINDY4BA8MYZ0 360 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 PIP4K2BP78356 416 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 C19orf44Q9H6X5 657 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 RBM8AQ9Y5S9 174 aaKnown RBP10.07□□□□□ -0.8
TMCO1-208ENST00000612311 CCP110O43303 1012 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 CWF19L2Q2TBE0 894 aaKnown RBP10.07□□□□□ -0.8
TMCO1-208ENST00000612311 NFATC2IPQ8NCF5 419 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 CCDC43Q96MW1 224 aaKnown RBP10.07□□□□□ -0.8
TMCO1-208ENST00000612311 SBNO1A3KN83 1393 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 SLC5A1P13866 664 aa10.07□□□□□ -0.8
TMCO1-208ENST00000612311 MYO5CQ9NQX4 1742 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 PLEKHG3A1L390 1219 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 CAVIN4Q5BKX8 364 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 CDK5RAP3Q96JB5 506 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 TCEANC2Q96MN5 208 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 RBM27Q9P2N5 1060 aaKnown RBP10.06□□□□□ -0.8
TMCO1-208ENST00000612311 MSH6P52701 1360 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 GOLGA8BA8MQT2 603 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 OFD1O75665 1012 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 ATP2B2Q01814 1243 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 CABLES1Q8TDN4 633 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 SMARCE1Q969G3 411 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 USP25Q9UHP3 1055 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 CCDC196A0A1B0GTZ2 297 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 ZNF771Q7L3S4 317 aaPredicted RBP10.06□□□□□ -0.8
TMCO1-208ENST00000612311 NECAB1Q8N987 351 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 TTC41PQ6P2S7 1318 aa10.06□□□□□ -0.8
TMCO1-208ENST00000612311 NAP1L1P55209 391 aaKnown RBP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 UBE2HP62256 183 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 SOGA3Q5TF21 947 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 TTLL5Q6EMB2 1281 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 CKAP2LQ8IYA6 745 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 CCDC112Q8NEF3 446 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 OTUD7AQ8TE49 926 aaPredicted RBP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 USP26Q9BXU7 913 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 DDX19AQ9NUU7 478 aaKnown RBP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 BABAM1Q9NWV8 329 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 MAGEC2Q9UBF1 373 aaPredicted RBP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 ERVK-7P63135 1459 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 CHMLP26374 656 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 RBM25P49756 843 aaKnown RBP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 HAND2P61296 217 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 RBM10P98175 930 aaKnown RBP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 BRF1Q92994 677 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 ANO10Q9NW15 660 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 PLA2R1Q13018 1463 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 SMTNL1A8MU46 457 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 RNMTO43148 476 aaKnown RBP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 CBFA2T2O43439 604 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 ZSCAN22P10073 491 aaPredicted RBP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 TRMT2AQ8IZ69 625 aaKnown RBP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 DDX21Q9NR30 783 aaKnown RBP eCLIP10.05□□□□□ -0.8
TMCO1-208ENST00000612311 RAB3GAP1Q15042 981 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 PPFIBP1Q86W92 1011 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 CCDC82Q8N4S0 544 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 USP16Q9Y5T5 823 aa10.05□□□□□ -0.8
TMCO1-208ENST00000612311 IFIT3O14879 490 aaKnown RBP10.04□□□□□ -0.8
TMCO1-208ENST00000612311 TNNT3P45378 269 aaPredicted RBP10.04□□□□□ -0.8
TMCO1-208ENST00000612311 IL15P40933 162 aaPredicted RBP10.04□□□□□ -0.8
TMCO1-208ENST00000612311 STIM1Q13586 685 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 TTF1Q15361 905 aaPredicted RBP10.04□□□□□ -0.8
TMCO1-208ENST00000612311 TEX35Q5T0J7 233 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 PIBF1Q8WXW3 757 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 SIRT1Q96EB6 747 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 ZNF521Q96K83 1311 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 YEATS2Q9ULM3 1422 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 CTAGE5O15320 804 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 EPS15P42566 896 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 ZSCAN23Q3MJ62 389 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 ORC3Q9UBD5 711 aaPredicted RBP10.04□□□□□ -0.8
TMCO1-208ENST00000612311 SLC12A7Q9Y666 1083 aa10.04□□□□□ -0.8
TMCO1-208ENST00000612311 XRCC6P12956 609 aaKnown RBP eCLIP10.03□□□□□ -0.8
TMCO1-208ENST00000612311 RNF41Q9H4P4 317 aaPredicted RBP10.03□□□□□ -0.8
TMCO1-208ENST00000612311 TMEM2Q9UHN6 1383 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms