RNA–Protein interactions for RNA: ENST00000612235.4

CADM1-221, Transcript of cell adhesion molecule 1, humanhuman

TSL 5 BASIC

Gene CADM1, Length 1,042 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CADM1-221ENST00000612235 RNF123Q5XPI4 1314 aa16.12■□□□□ 0.17
CADM1-221ENST00000612235 CNTNAP4Q9C0A0 1308 aa16.12■□□□□ 0.17
CADM1-221ENST00000612235 USP42Q9H9J4 1324 aaKnown RBP16.12■□□□□ 0.17
CADM1-221ENST00000612235 AMOTQ4VCS5 1084 aa16.11■□□□□ 0.17
CADM1-221ENST00000612235 C1orf141Q5JVX7 400 aa16.11■□□□□ 0.17
CADM1-221ENST00000612235 CFAP53Q96M91 514 aa16.11■□□□□ 0.17
CADM1-221ENST00000612235 ZNF541Q9H0D2 1346 aa16.11■□□□□ 0.17
CADM1-221ENST00000612235 SAPCD2Q86UD0 394 aa16.1■□□□□ 0.17
CADM1-221ENST00000612235 TRPM7Q96QT4 1865 aa16.1■□□□□ 0.17
CADM1-221ENST00000612235 COL6A3P12111 3177 aa16.09■□□□□ 0.17
CADM1-221ENST00000612235 ZEB1P37275 1124 aaPredicted RBP16.09■□□□□ 0.17
CADM1-221ENST00000612235 DDX10Q13206 875 aaKnown RBP16.09■□□□□ 0.17
CADM1-221ENST00000612235 NKX1-1Q15270 411 aaPredicted RBP16.09■□□□□ 0.17
CADM1-221ENST00000612235 ZNF622Q969S3 477 aaKnown RBP eCLIP16.09■□□□□ 0.17
CADM1-221ENST00000612235 ZIC5Q96T25 663 aa16.09■□□□□ 0.17
CADM1-221ENST00000612235 RBM42Q9BTD8 480 aaKnown RBP16.09■□□□□ 0.17
CADM1-221ENST00000612235 ATG3Q9NT62 314 aa16.09■□□□□ 0.17
CADM1-221ENST00000612235 HSP90AB1P08238 724 aaKnown RBP16.08■□□□□ 0.16
CADM1-221ENST00000612235 PPP2R1AP30153 589 aa16.08■□□□□ 0.16
CADM1-221ENST00000612235 SLC4A9Q96Q91 983 aa16.08■□□□□ 0.16
CADM1-221ENST00000612235 KDRP35968 1356 aa16.08■□□□□ 0.16
CADM1-221ENST00000612235 SAGE1Q9NXZ1 904 aa16.07■□□□□ 0.16
CADM1-221ENST00000612235 MKI67P46013 3256 aaKnown RBP16.06■□□□□ 0.16
CADM1-221ENST00000612235 COL5A3P25940 1745 aaPredicted RBP16.06■□□□□ 0.16
CADM1-221ENST00000612235 CABP4P57796 275 aa16.06■□□□□ 0.16
CADM1-221ENST00000612235 NOGQ13253 232 aa16.06■□□□□ 0.16
CADM1-221ENST00000612235 AKAP4Q5JQC9 854 aa16.06■□□□□ 0.16
CADM1-221ENST00000612235 BICDL1Q6ZP65 573 aa16.06■□□□□ 0.16
CADM1-221ENST00000612235 HHIPL1Q96JK4 782 aa16.06■□□□□ 0.16
CADM1-221ENST00000612235 AFDNP55196 1824 aaKnown RBP16.05■□□□□ 0.16
CADM1-221ENST00000612235 MPNDQ8N594 471 aa16.05■□□□□ 0.16
CADM1-221ENST00000612235 NUDCQ9Y266 331 aa16.05■□□□□ 0.16
CADM1-221ENST00000612235 TRPA1O75762 1119 aa16.04■□□□□ 0.16
CADM1-221ENST00000612235 CELF2O95319 508 aaKnown RBP16.04■□□□□ 0.16
CADM1-221ENST00000612235 TRIOBPQ9H2D6 2365 aa16.03■□□□□ 0.16
CADM1-221ENST00000612235 ERVV-2B6SEH9 535 aa16.03■□□□□ 0.16
CADM1-221ENST00000612235 CARMIL3Q8ND23 1372 aa16.02■□□□□ 0.16
CADM1-221ENST00000612235 MYH14Q7Z406 1995 aaKnown RBP16.02■□□□□ 0.16
CADM1-221ENST00000612235 U2AF1L5P0DN76 240 aaPredicted RBP16.02■□□□□ 0.16
CADM1-221ENST00000612235 U2AF1Q01081 240 aaKnown RBP eCLIP16.02■□□□□ 0.164e-7■■■□□ 17.4
CADM1-221ENST00000612235 PKN2Q16513 984 aaKnown RBP16.02■□□□□ 0.16
CADM1-221ENST00000612235 USPL1Q5W0Q7 1092 aa16.02■□□□□ 0.16
CADM1-221ENST00000612235 COL3A1P02461 1466 aaPredicted RBP16.02■□□□□ 0.15
CADM1-221ENST00000612235 ZPR1O75312 459 aa16.01■□□□□ 0.15
CADM1-221ENST00000612235 SERPINB2P05120 415 aa16.01■□□□□ 0.15
CADM1-221ENST00000612235 NFIXQ14938 502 aa16.01■□□□□ 0.15
CADM1-221ENST00000612235 MTHFSDQ2M296 383 aaKnown RBP16.01■□□□□ 0.15
CADM1-221ENST00000612235 RNF186Q9NXI6 227 aa16.01■□□□□ 0.15
CADM1-221ENST00000612235 NRXN2Q9P2S2 1712 aa16.01■□□□□ 0.15
CADM1-221ENST00000612235 ZNF831Q5JPB2 1677 aa16■□□□□ 0.15
CADM1-221ENST00000612235 CRKLP46109 303 aaKnown RBP16■□□□□ 0.15
CADM1-221ENST00000612235 PRKAR2BP31323 418 aa15.99■□□□□ 0.15
CADM1-221ENST00000612235 NFATC2IPQ8NCF5 419 aa15.99■□□□□ 0.15
CADM1-221ENST00000612235 LMOD1P29536 600 aaPredicted RBP15.98■□□□□ 0.15
CADM1-221ENST00000612235 GPC2Q8N158 579 aa15.98■□□□□ 0.15
CADM1-221ENST00000612235 SYNE4Q8N205 404 aa15.98■□□□□ 0.15
CADM1-221ENST00000612235 ZNF408Q9H9D4 720 aa15.98■□□□□ 0.15
CADM1-221ENST00000612235 LGR6Q9HBX8 967 aa15.98■□□□□ 0.15
CADM1-221ENST00000612235 RNMTO43148 476 aaKnown RBP15.97■□□□□ 0.15
CADM1-221ENST00000612235 PTCD1O75127 700 aaKnown RBP15.97■□□□□ 0.15
CADM1-221ENST00000612235 SOGA3Q5TF21 947 aa15.97■□□□□ 0.15
CADM1-221ENST00000612235 GAS2L2Q8NHY3 880 aa15.97■□□□□ 0.15
CADM1-221ENST00000612235 COL25A1Q9BXS0 654 aaPredicted RBP15.97■□□□□ 0.15
CADM1-221ENST00000612235 HDAC9Q9UKV0 1011 aa15.97■□□□□ 0.15
CADM1-221ENST00000612235 SCN11AQ9UI33 1791 aa15.96■□□□□ 0.15
CADM1-221ENST00000612235 ZNF277Q9NRM2 450 aaPredicted RBP15.96■□□□□ 0.15
CADM1-221ENST00000612235 KIF23Q02241 960 aaPredicted RBP15.95■□□□□ 0.14
CADM1-221ENST00000612235 RALBP1Q15311 655 aa15.95■□□□□ 0.14
CADM1-221ENST00000612235 RSPH6AQ9H0K4 717 aa15.95■□□□□ 0.14
CADM1-221ENST00000612235 COL11A2P13942 1736 aaPredicted RBP15.94■□□□□ 0.14
CADM1-221ENST00000612235 POTEFA5A3E0 1075 aa15.94■□□□□ 0.14
CADM1-221ENST00000612235 NEFMP07197 916 aa15.94■□□□□ 0.14
CADM1-221ENST00000612235 PDE6BP35913 854 aa15.94■□□□□ 0.14
CADM1-221ENST00000612235 EPS15P42566 896 aa15.94■□□□□ 0.14
CADM1-221ENST00000612235 PRPF40BQ6NWY9 871 aaKnown RBP15.94■□□□□ 0.14
CADM1-221ENST00000612235 PHACTR3Q96KR7 559 aa15.94■□□□□ 0.14
CADM1-221ENST00000612235 SLC52A2Q9HAB3 445 aa15.94■□□□□ 0.14
CADM1-221ENST00000612235 PDZRN3Q9UPQ7 1066 aa15.94■□□□□ 0.14
CADM1-221ENST00000612235 GJA3Q9Y6H8 435 aa15.94■□□□□ 0.14
CADM1-221ENST00000612235 GNAT3A8MTJ3 354 aa15.93■□□□□ 0.14
CADM1-221ENST00000612235 HUNKP57058 714 aa15.93■□□□□ 0.14
CADM1-221ENST00000612235 USP50Q70EL3 339 aaPredicted RBP15.93■□□□□ 0.14
CADM1-221ENST00000612235 SLX4Q8IY92 1834 aa15.93■□□□□ 0.14
CADM1-221ENST00000612235 FZD9O00144 591 aa15.92■□□□□ 0.14
CADM1-221ENST00000612235 TEFQ10587 303 aa15.92■□□□□ 0.14
CADM1-221ENST00000612235 SLC39A6Q13433 755 aa15.92■□□□□ 0.14
CADM1-221ENST00000612235 FBXO46Q6PJ61 603 aaPredicted RBP15.92■□□□□ 0.14
CADM1-221ENST00000612235 CNKSR1Q969H4 720 aa15.92■□□□□ 0.14
CADM1-221ENST00000612235 OTUD5Q96G74 571 aa15.92■□□□□ 0.14
CADM1-221ENST00000612235 GLIS2Q9BZE0 524 aaPredicted RBP15.92■□□□□ 0.14
CADM1-221ENST00000612235 CACNA1SQ13698 1873 aa15.92■□□□□ 0.14
CADM1-221ENST00000612235 ANKRD31Q8N7Z5 1873 aa15.91■□□□□ 0.14
CADM1-221ENST00000612235 FAM155AB1AL88 458 aaPredicted RBP15.91■□□□□ 0.14
CADM1-221ENST00000612235 RTF1Q92541 710 aaKnown RBP15.91■□□□□ 0.14
CADM1-221ENST00000612235 AKAP11Q9UKA4 1901 aa15.91■□□□□ 0.14
CADM1-221ENST00000612235 FKBP4Q02790 459 aaKnown RBP eCLIP15.9■□□□□ 0.14
CADM1-221ENST00000612235 CCDC93Q567U6 631 aa15.9■□□□□ 0.14
CADM1-221ENST00000612235 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
CADM1-221ENST00000612235 CCDC24Q8N4L8 307 aa15.9■□□□□ 0.14
CADM1-221ENST00000612235 BRIP1Q9BX63 1249 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms