RNA–Protein interactions for RNA: ENST00000608456.5

HDDC2-205, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-205ENST00000608456 TMC2Q8TDI7 906 aa7.68□□□□□ -1.18
HDDC2-205ENST00000608456 RUFY2Q8WXA3 655 aa7.68□□□□□ -1.18
HDDC2-205ENST00000608456 RTF1Q92541 710 aaKnown RBP7.68□□□□□ -1.18
HDDC2-205ENST00000608456 OGFRQ9NZT2 677 aa7.68□□□□□ -1.18
HDDC2-205ENST00000608456 RBM27Q9P2N5 1060 aaKnown RBP7.68□□□□□ -1.18
HDDC2-205ENST00000608456 TECPR2O15040 1411 aa7.68□□□□□ -1.18
HDDC2-205ENST00000608456 NRKQ7Z2Y5 1582 aa7.67□□□□□ -1.18
HDDC2-205ENST00000608456 SIGLEC1Q9BZZ2 1709 aa7.67□□□□□ -1.18
HDDC2-205ENST00000608456 TESPA1A2RU30 521 aaPredicted RBP7.67□□□□□ -1.18
HDDC2-205ENST00000608456 KIF2AO00139 706 aaPredicted RBP7.67□□□□□ -1.18
HDDC2-205ENST00000608456 STX6O43752 255 aa7.67□□□□□ -1.18
HDDC2-205ENST00000608456 RNF20Q5VTR2 975 aa7.67□□□□□ -1.18
HDDC2-205ENST00000608456 KCND1Q9NSA2 647 aa7.67□□□□□ -1.18
HDDC2-205ENST00000608456 MINK1Q8N4C8 1332 aaPredicted RBP7.67□□□□□ -1.18
HDDC2-205ENST00000608456 USP42Q9H9J4 1324 aaKnown RBP7.67□□□□□ -1.18
HDDC2-205ENST00000608456 CRB1P82279 1406 aa7.67□□□□□ -1.18
HDDC2-205ENST00000608456 SPATA31D1Q6ZQQ2 1576 aa7.67□□□□□ -1.18
HDDC2-205ENST00000608456 SMTNL1A8MU46 457 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 HIP1O00291 1037 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 GIGYF1O75420 1035 aaPredicted RBP7.66□□□□□ -1.18
HDDC2-205ENST00000608456 F13A1P00488 732 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 CDC25BP30305 580 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 DSG2Q14126 1118 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 VPS53Q5VIR6 699 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 CCDC30Q5VVM6 783 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 FAM200AQ8TCP9 573 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 SSH3Q8TE77 659 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 CHMP4CQ96CF2 233 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 TTC14Q96N46 770 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 MEIS3Q99687 375 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 STK31Q9BXU1 1019 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 SCAND2PQ9GZW5 306 aaPredicted RBP7.66□□□□□ -1.18
HDDC2-205ENST00000608456 CGNQ9P2M7 1197 aaKnown RBP7.66□□□□□ -1.18
HDDC2-205ENST00000608456 NSFL1CQ9UNZ2 370 aaKnown RBP7.66□□□□□ -1.18
HDDC2-205ENST00000608456 TTC41PQ6P2S7 1318 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 RAD50Q92878 1312 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 MAP3K5Q99683 1374 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 AK9Q5TCS8 1911 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 DLG5Q8TDM6 1919 aa7.66□□□□□ -1.18
HDDC2-205ENST00000608456 PLEKHG3A1L390 1219 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 SGSM2O43147 1006 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 HMOX1P09601 288 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 HOXB7P09629 217 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 ANKRD1Q15327 319 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 ATL3Q6DD88 541 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 RBM43Q6ZSC3 357 aaKnown RBP7.65□□□□□ -1.18
HDDC2-205ENST00000608456 USP31Q70CQ4 1352 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.65□□□□□ -1.18
HDDC2-205ENST00000608456 CNTROBQ8N137 903 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 ZNF710Q8N1W2 664 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 PREX1Q8TCU6 1659 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 TUBGCP6Q96RT7 1819 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 ADGRL3Q9HAR2 1447 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 SNRKQ9NRH2 765 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 DDX19AQ9NUU7 478 aaKnown RBP7.65□□□□□ -1.18
HDDC2-205ENST00000608456 STK26Q9P289 416 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 SMC3Q9UQE7 1217 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 COLQQ9Y215 455 aaPredicted RBP7.65□□□□□ -1.18
HDDC2-205ENST00000608456 DIP2CQ9Y2E4 1556 aa7.65□□□□□ -1.18
HDDC2-205ENST00000608456 MON2Q7Z3U7 1717 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 AGLP35573 1532 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 KDRP35968 1356 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 MSH6P52701 1360 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 POTEFA5A3E0 1075 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 SPDYE16A6NNV3 312 aaPredicted RBP7.64□□□□□ -1.19
HDDC2-205ENST00000608456 ELL2O00472 640 aaPredicted RBP7.64□□□□□ -1.19
HDDC2-205ENST00000608456 POTEIP0CG38 1075 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 SYT1P21579 422 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 PSMA5P28066 241 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 SLFNL1Q499Z3 407 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 LMOD2Q6P5Q4 547 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 RNF214Q8ND24 703 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 RGS22Q8NE09 1264 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 OTUD7AQ8TE49 926 aaPredicted RBP7.64□□□□□ -1.19
HDDC2-205ENST00000608456 KIF1BPQ96EK5 621 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 BCL2L12Q9HB09 334 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 ANO2Q9NQ90 1003 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 METRNQ9UJH8 293 aa7.64□□□□□ -1.19
HDDC2-205ENST00000608456 MORC2Q9Y6X9 1032 aaPredicted RBP7.64□□□□□ -1.19
HDDC2-205ENST00000608456 NPHP3Q7Z494 1330 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 TTC21AQ8NDW8 1320 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 C2orf72A6NCS6 295 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 CTAGE5O15320 804 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 GLRX3O76003 335 aaKnown RBP7.63□□□□□ -1.19
HDDC2-205ENST00000608456 KRT85P78386 507 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 MAP3K11Q16584 847 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 TSGA10IPQ3SY00 556 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 PPP4R3BQ5MIZ7 849 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 SMYD5Q6GMV2 418 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 SARM1Q6SZW1 724 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 NUDT16Q96DE0 195 aaKnown RBP7.63□□□□□ -1.19
HDDC2-205ENST00000608456 THUMPD2Q9BTF0 503 aaKnown RBP7.63□□□□□ -1.19
HDDC2-205ENST00000608456 ZSWIM6Q9HCJ5 1215 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 EMILIN1Q9Y6C2 1016 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 N4BP2Q86UW6 1770 aaPredicted RBP7.63□□□□□ -1.19
HDDC2-205ENST00000608456 ITSN1Q15811 1721 aa7.63□□□□□ -1.19
HDDC2-205ENST00000608456 A2ML1A8K2U0 1454 aa7.62□□□□□ -1.19
HDDC2-205ENST00000608456 CFAP65Q6ZU64 1925 aaKnown RBP7.62□□□□□ -1.19
HDDC2-205ENST00000608456 AKAP12Q02952 1782 aa7.62□□□□□ -1.19
HDDC2-205ENST00000608456 CCDC66A2RUB6 948 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms