RNA–Protein interactions for RNA: ENST00000607045.5

TMEM248-207, Transcript of transmembrane protein 248, humanhuman

TSL 3

Gene TMEM248, Length 690 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-207ENST00000607045 FSTL1Q12841 308 aa28.97■■■□□ 2.23
TMEM248-207ENST00000607045 HLFQ16534 295 aa28.97■■■□□ 2.23
TMEM248-207ENST00000607045 SCN7AQ01118 1682 aa28.96■■■□□ 2.23
TMEM248-207ENST00000607045 NEFMP07197 916 aa28.96■■■□□ 2.23
TMEM248-207ENST00000607045 STYK1Q6J9G0 422 aa28.96■■■□□ 2.23
TMEM248-207ENST00000607045 CNKSR1Q969H4 720 aa28.96■■■□□ 2.23
TMEM248-207ENST00000607045 DLEC1Q9Y238 1755 aa28.96■■■□□ 2.23
TMEM248-207ENST00000607045 FAM177BA6PVY3 158 aa28.95■■■□□ 2.22
TMEM248-207ENST00000607045 NFE2L2Q16236 605 aa28.95■■■□□ 2.22
TMEM248-207ENST00000607045 NGEFQ8N5V2 710 aa28.95■■■□□ 2.22
TMEM248-207ENST00000607045 MASTLQ96GX5 879 aa28.95■■■□□ 2.22
TMEM248-207ENST00000607045 NIP7Q9Y221 180 aaKnown RBP eCLIP28.95■■■□□ 2.22
TMEM248-207ENST00000607045 ZNF652Q9Y2D9 606 aa28.95■■■□□ 2.22
TMEM248-207ENST00000607045 VEGFAP15692 232 aaPredicted RBP28.94■■■□□ 2.22
TMEM248-207ENST00000607045 PRPF40BQ6NWY9 871 aaKnown RBP28.94■■■□□ 2.22
TMEM248-207ENST00000607045 POTECB2RU33 542 aa28.93■■■□□ 2.22
TMEM248-207ENST00000607045 EIF4A1P60842 406 aaKnown RBP28.92■■■□□ 2.22
TMEM248-207ENST00000607045 ERFEQ4G0M1 354 aa28.92■■■□□ 2.22
TMEM248-207ENST00000607045 TPTE2Q6XPS3 522 aa28.92■■■□□ 2.22
TMEM248-207ENST00000607045 PNISRQ8TF01 805 aaKnown RBP28.91■■■□□ 2.22
TMEM248-207ENST00000607045 RRP7AQ9Y3A4 280 aaKnown RBP28.91■■■□□ 2.22
TMEM248-207ENST00000607045 PCNTO95613 3336 aa28.9■■■□□ 2.22
TMEM248-207ENST00000607045 KLRG2A4D1S0 409 aaPredicted RBP28.9■■■□□ 2.22
TMEM248-207ENST00000607045 C7orf43Q8WVR3 580 aa28.9■■■□□ 2.22
TMEM248-207ENST00000607045 DPY19L2Q6NUT2 758 aa28.89■■■□□ 2.22
TMEM248-207ENST00000607045 SMC1BQ8NDV3 1235 aa28.89■■■□□ 2.22
TMEM248-207ENST00000607045 TAOK3Q9H2K8 898 aa28.89■■■□□ 2.22
TMEM248-207ENST00000607045 COL11A2P13942 1736 aaPredicted RBP28.89■■■□□ 2.21
TMEM248-207ENST00000607045 IFFO2Q5TF58 517 aa28.88■■■□□ 2.21
TMEM248-207ENST00000607045 SLX4Q8IY92 1834 aa28.87■■■□□ 2.21
TMEM248-207ENST00000607045 CCDC88AQ3V6T2 1871 aa28.87■■■□□ 2.21
TMEM248-207ENST00000607045 RGL2O15211 777 aa28.87■■■□□ 2.21
TMEM248-207ENST00000607045 NPR1P16066 1061 aa28.87■■■□□ 2.21
TMEM248-207ENST00000607045 TTLL7Q6ZT98 887 aa28.87■■■□□ 2.21
TMEM248-207ENST00000607045 OLFM4Q6UX06 510 aa28.86■■■□□ 2.21
TMEM248-207ENST00000607045 PNNQ9H307 717 aaKnown RBP28.86■■■□□ 2.21
TMEM248-207ENST00000607045 LTBP3Q9NS15 1303 aa28.86■■■□□ 2.21
TMEM248-207ENST00000607045 BCORQ6W2J9 1755 aa28.85■■■□□ 2.21
TMEM248-207ENST00000607045 MYL6BP14649 208 aa28.85■■■□□ 2.21
TMEM248-207ENST00000607045 MAPK8IP3Q9UPT6 1336 aa28.85■■■□□ 2.21
TMEM248-207ENST00000607045 DDNO94850 711 aaPredicted RBP28.83■■■□□ 2.21
TMEM248-207ENST00000607045 GTF2E1P29083 439 aaPredicted RBP28.83■■■□□ 2.21
TMEM248-207ENST00000607045 SOGA3Q5TF21 947 aa28.83■■■□□ 2.21
TMEM248-207ENST00000607045 KLRG1Q96E93 195 aa28.83■■■□□ 2.21
TMEM248-207ENST00000607045 ERVV-1B6SEH8 477 aa28.82■■■□□ 2.2
TMEM248-207ENST00000607045 RIPK4P57078 832 aa28.82■■■□□ 2.2
TMEM248-207ENST00000607045 TNRC6CQ9HCJ0 1690 aaKnown RBP28.82■■■□□ 2.2
TMEM248-207ENST00000607045 DLG5Q8TDM6 1919 aa28.81■■■□□ 2.2
TMEM248-207ENST00000607045 FER1L6Q2WGJ9 1857 aa28.81■■■□□ 2.2
TMEM248-207ENST00000607045 MAP3K15Q6ZN16 1313 aa28.81■■■□□ 2.2
TMEM248-207ENST00000607045 DDX10Q13206 875 aaKnown RBP28.81■■■□□ 2.2
TMEM248-207ENST00000607045 RALBP1Q15311 655 aa28.81■■■□□ 2.2
TMEM248-207ENST00000607045 NUTM1Q86Y26 1132 aa28.81■■■□□ 2.2
TMEM248-207ENST00000607045 CCDC93Q567U6 631 aa28.8■■■□□ 2.2
TMEM248-207ENST00000607045 ZBTB3Q9H5J0 574 aa28.8■■■□□ 2.2
TMEM248-207ENST00000607045 GPTP24298 496 aa28.79■■■□□ 2.2
TMEM248-207ENST00000607045 TSPYL4Q9UJ04 414 aa28.79■■■□□ 2.2
TMEM248-207ENST00000607045 KIF6Q6ZMV9 814 aa28.78■■■□□ 2.2
TMEM248-207ENST00000607045 ZNF277Q9NRM2 450 aaPredicted RBP28.77■■■□□ 2.2
TMEM248-207ENST00000607045 WDR90Q96KV7 1748 aa28.77■■■□□ 2.2
TMEM248-207ENST00000607045 EIF2S2P20042 333 aaKnown RBP28.76■■■□□ 2.19
TMEM248-207ENST00000607045 ALDH1B1P30837 517 aa28.76■■■□□ 2.19
TMEM248-207ENST00000607045 TMPOP42166 694 aaKnown RBP28.76■■■□□ 2.19
TMEM248-207ENST00000607045 SUSD4Q5VX71 490 aa28.76■■■□□ 2.19
TMEM248-207ENST00000607045 TIAM2Q8IVF5 1701 aa28.75■■■□□ 2.19
TMEM248-207ENST00000607045 POTEIP0CG38 1075 aa28.75■■■□□ 2.19
TMEM248-207ENST00000607045 POTEJP0CG39 1038 aa28.75■■■□□ 2.19
TMEM248-207ENST00000607045 FKBP4Q02790 459 aaKnown RBP eCLIP28.75■■■□□ 2.19
TMEM248-207ENST00000607045 PDIA6Q15084 440 aa28.75■■■□□ 2.19
TMEM248-207ENST00000607045 JMYQ8N9B5 988 aa28.75■■■□□ 2.19
TMEM248-207ENST00000607045 NYXQ9GZU5 481 aa28.75■■■□□ 2.19
TMEM248-207ENST00000607045 UBN2Q6ZU65 1347 aa28.74■■■□□ 2.19
TMEM248-207ENST00000607045 ZNF34Q8IZ26 560 aa28.74■■■□□ 2.19
TMEM248-207ENST00000607045 KDM3BQ7LBC6 1761 aa28.74■■■□□ 2.19
TMEM248-207ENST00000607045 ABCC12Q96J65 1359 aa28.74■■■□□ 2.19
TMEM248-207ENST00000607045 ANXA1P04083 346 aa28.73■■■□□ 2.19
TMEM248-207ENST00000607045 CRY2Q49AN0 593 aa28.73■■■□□ 2.19
TMEM248-207ENST00000607045 LRP10Q7Z4F1 713 aa28.73■■■□□ 2.19
TMEM248-207ENST00000607045 CCDC146Q8IYE0 955 aa28.73■■■□□ 2.19
TMEM248-207ENST00000607045 RTKN2Q8IZC4 609 aa28.73■■■□□ 2.19
TMEM248-207ENST00000607045 CACNA1SQ13698 1873 aa28.72■■■□□ 2.19
TMEM248-207ENST00000607045 NEUROD2Q15784 382 aa28.72■■■□□ 2.19
TMEM248-207ENST00000607045 PROSER3Q2NL68 480 aa28.72■■■□□ 2.19
TMEM248-207ENST00000607045 SYNE4Q8N205 404 aa28.72■■■□□ 2.19
TMEM248-207ENST00000607045 DICER1Q9UPY3 1922 aaKnown RBP28.72■■■□□ 2.19
TMEM248-207ENST00000607045 GIGYF2Q6Y7W6 1299 aaKnown RBP28.71■■■□□ 2.19
TMEM248-207ENST00000607045 CHADLQ6NUI6 762 aa28.69■■■□□ 2.18
TMEM248-207ENST00000607045 C3orf67Q6ZVT6 689 aa28.69■■■□□ 2.18
TMEM248-207ENST00000607045 SLC51AQ86UW1 340 aa28.69■■■□□ 2.18
TMEM248-207ENST00000607045 NECTIN2Q92692 538 aa28.69■■■□□ 2.18
TMEM248-207ENST00000607045 ERBB4Q15303 1308 aa28.69■■■□□ 2.18
TMEM248-207ENST00000607045 LAMB4A4D0S4 1761 aa28.68■■■□□ 2.18
TMEM248-207ENST00000607045 HOXA10P31260 410 aaPredicted RBP28.68■■■□□ 2.18
TMEM248-207ENST00000607045 BABAM1Q9NWV8 329 aa28.68■■■□□ 2.18
TMEM248-207ENST00000607045 ZNF541Q9H0D2 1346 aa28.68■■■□□ 2.18
TMEM248-207ENST00000607045 NTSR2O95665 410 aa28.67■■■□□ 2.18
TMEM248-207ENST00000607045 RPGRQ92834 1020 aaKnown RBP28.67■■■□□ 2.18
TMEM248-207ENST00000607045 NUP98P52948 1817 aa28.66■■■□□ 2.18
TMEM248-207ENST00000607045 ARFGEF2Q9Y6D5 1785 aa28.66■■■□□ 2.18
TMEM248-207ENST00000607045 IARSP41252 1262 aaKnown RBP28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms